Difference between revisions of "Bugs and fixes"
From Geos-chem
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The following bugs and/or technical issues were resolved in GEOS-Chem v9-02. | The following bugs and/or technical issues were resolved in GEOS-Chem v9-02. | ||
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| − | === | + | {| border=1 cellspacing=0 cellpadding=5 |
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| − | + | !width="250px"|Module or area | |
| − | + | !width="750px"|Issue that was resolved | |
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| − | = | + | |
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| − | = | + | |-valign="top" |
| − | + | |Emissions | |
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| − | # | + | *[[GEOS-Chem_v9-02#Bug_fix_for_updated_CAC_emissions|Bug fix for updated CAC emissions]] |
| − | #[[ | + | *[[GEOS-Chem_v9-02#Bug_fix_for_Br2_emissions|Bug fix for Br2 emissions]] |
| + | *[[GEOS-Chem_v9-02#Bug_in_regridding_of_anthropogenic_emissions|Bug fix in regridding of anthro emissions]] | ||
| + | *[[GEOS-Chem_v9-02#Bug_in_MEGAN_emissions_when_running_with_MERRA_or_GEOS-FP|Bug in MEGAN emissions when using MERRA or GEOS-FP]] | ||
| + | *[[GEOS-Chem_v9-02#Bug_fix_in_nei2005_anthro_mod.F|Bug fix in nei2005_anthro_mod.F]] | ||
| + | *[[David_Streets_regional_emissions_for_China_and_SE_Asia#Bug_in_EMIS_STREETS_ANTHRO_05x0666|Bug fix in EMIS_STREETS_ANTHRO_05x0666]] | ||
| + | *[[GEOS-Chem_v9-02#Bug_fixes_in_biofuel_mod.F_and_emfossil.F|Bug fixes in biofuel_mod.F and emfossil.F]] | ||
| + | *[[GFED3_biomass_burning_emissions#Bug_fix_for_3-hourly_GFED3_emissions|Bug fix for 3-hourly GFED3 emissions]] | ||
| + | *[[Volcanic_SO2_emissions_from_Aerocom#Typo_in_VOLCPRESS_definition|Fixed typo in Aerocom volcanic SO2 emissions routine]] | ||
| + | *[[GEOS-Chem_v9-02#Bug_fixes_in_day-of-week_computation|Bug fixes in day-of-week computation]] | ||
| + | *[[Anthropogenic_emissions#Prevent_negative_emissions_over_Canada|Prevent negative emissions over Canada]] | ||
| + | *[[TOMAS_aerosol_microphysics#Minor_bug_in_TOMAS_sulfate_emissions|Minor bug fix in TOMAS sulfate emissions]] | ||
| + | *[[EPA/NEI05 North American emissions#Bug fix for NEI2005 SO4 emissions in sulfate_mod.F|Bug fix for NEI2005 SO4 emissions in sulfate_mod.F]] | ||
| + | *[[Hudman_et_al_2012_soil_NOx_emissions_algorithm#Prevent_LOG.280.29_error_from_occurring_in_soil_NOx_module|Prevent LOG(0) error from occurring in soil NOx module]] | ||
| + | *[[Historical_and_Future_Emissions#Bug_fix_for_BC.2FOC_biofuels_when_using_RCP_scenarios|Bug fix for biofuels when using RCP scenarios]] | ||
| − | = | + | |-valign="top" |
| − | #[[ | + | |Dry deposition and wet deposition |
| − | #[[GEOS-Chem_v9-02# | + | | |
| − | + | *[[Acetone#DRYACET_is_missing_from_globchem.dat|Add missing DRYACET to globchem.dat mechanism file]] | |
| + | *[[Wet_deposition#Bug_in_Henry.27s_constant|Bug fix in Henry's law constant]] | ||
| + | *[[Dry_deposition#Error_in_definition_of_RIP_and_IEPOX_drydep_species|Bug fix in definition of RIP, IEPOX drydep species]] | ||
| + | *[[Ship_emissions#Only_call_PARANOX_with_the_full-chemistry_simulations|Bug fix: Do not call PARANOX plume model for offline simulations]] | ||
| + | *[[Dry_deposition#Parallelization_error_in_routine_METERO|Fix for parallelization bug in subroutine METERO (in drydep module)]] | ||
| + | *[[Dry_deposition#Parallelization_error_in_routine_DRYFLX|Fixed parallelization error in routine DRYFLX (in dry deposition module)]] | ||
| + | *[[GEOS-Chem_v9-02#Prevent_bad_drydep_flux_values_from_being_passed_to_the_soil_NOx_emissions_module|Prevent bad drydep flux values from being passed to the soil NOx module]] | ||
| + | *[[Sea_salt_aerosols#Minor_bug_in_AD44_diagnostic_in_routine_DRY_DEPOSITION|Fixed minor bug in AD44 diagnostic in routine DRY DEPOSITION (sea salt aerosols)]] | ||
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| − | + | |Met fields | |
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| − | + | *[[GEOS-Chem_v9-02#Correction_for_GEOS-5_PBL_heights|Correction for GEOS-5 PBL heights]] | |
| − | + | *[[GEOS-5 issues#Reset NaNs in MOISTQ to zero|Reset NaNs in MOISTQ to zero]] | |
| − | + | *[[GEOS-Chem_v9-02#Convert_MERRA_and_GEOS-FP_relative_humidity_fields_to_percent_after_reading_from_disk|Convert MERRA and GEOS-FP relative humidity fields to percent after reading from disk]] | |
| − | + | *[[GEOS-Chem_v9-02#Bug_fix_for_declaration_of_GEOS-FP_PFICU.2C_PFLCU.2C_PFILSAN.2C_PFLLSAN_fields|Bug fix for declaration of certain GEOS-FP met fields]] | |
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| − | + | |Computational efficiency | |
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| − | + | *[[Passing_array_arguments_efficiently_in_GEOS-Chem|Eliminate inefficient subroutine calls]] | |
| + | *[[Numerical issues discovered in GEOS-Chem|Corrected several floating-point errors]] | ||
| + | *Eliminate array temporaries in [[Passing_array_arguments_efficiently_in_GEOS-Chem#pjc_pfix_mod.F|pjc_pfix_mod.F]] and [[Passing_array_arguments_efficiently_in_GEOS-Chem#pressure_mod.F|pressure_mod.F]] | ||
| + | *[[Passing_array_arguments_efficiently_in_GEOS-Chem#gcap_convect_mod.F|Eliminate array temporaries in GCAP convection module]] | ||
| − | == | + | |-valign="top" |
| − | #[[GEOS-Chem_v9-02#Additional_bug_fixes_for_MAP_A2A_regridding_algorithm|Additional bug fixes for MAP_A2A regridding]] | + | |Diagnostics |
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| − | + | *[[GEOS-Chem_v9-01-03#Bug_fix_in_hdf_mod.F|Bug fix in hdf_mod.F]] | |
| − | + | *[[GEOS-Chem_v9-02#Bug_fixes_in_diag48_mod.F|Bug fixes in diag48_mod.F]] | |
| − | + | *[[Ship_emissions#Bug_in_ND36_diagnostic_when_ship_emissions_are_turned_off|Bug fix in ND36 diagnostic when ship emissions are turned off]] | |
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| + | |-valign="top" | ||
| + | |Specialty simulations (including microphysics) | ||
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| + | *[[GEOS-Chem_v9-02#Bug_fixes_for_tagged_CO_simulation|Bug fixes for tagged CO simulation]] | ||
| + | *[[Mercury#Bug_fixes_for_nested_Hg_simulation|Bug fixes for nested Hg simulation]] | ||
| + | *[[GEOS-Chem_v9-02#Bug_fix_for_reading_OH_file_in_offline_simulations|Bug fix for reading OH file in offline simulations]] | ||
| + | *[[Aerosol-only_simulation#Emissions_not_included_when_using_non-local_PBL_mixing_scheme|Now include emissions in the aerosol-only simulation when using non-local PBL mixing]] | ||
| + | *[[Aerosol-only_simulation#Error_in_ISOROPIAII_when_sulfate_aerosols_are_turned_off|Avoid error in ISOROPIAII when using offline aerosol simulation]] | ||
| + | *[[Tagged_Ox_simulation#Modifications_for_v9-02_tagged_O3_simulation|Modifications for v9-02 tagged O3 simulation]] | ||
| + | *[[CH4_simulation#Fixes_for_wetland_emissions|Fixes for wetland emissions in CH4 simulation]] | ||
| + | *[[Tagged_Ox_simulation#Reactivate_stratospheric_P.28Ox.29_in_tagged_Ox_simulation|Reactivate stratospheric P(Ox) in tagged Ox simulation]] | ||
| + | *[[Tagged_Ox_simulation#Replace_LD65_with_LLTROP_in_tagged_ox_mod.F|Replace LD65 with LLTROP in tagged_ox_mod.F]] | ||
| + | *[[TOMAS_aerosol_microphysics#Updates_for_GEOS-Chem_v9-02_public_release|Several fixes for TOMAS aerosol microphysics]] | ||
| + | *[[POPs_simulation#Prevent_error_when_reading_global_OC|Prevent error in POPs simulation when reading global OC]] | ||
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| + | |-valign="top" | ||
| + | |Photolysis | ||
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| + | *[[FAST-J photolysis mechanism#Prevent 0.5 x 0.667 nested grid simulations from crashing when reading TOMS data|Prevent 0.5 x 0.667 nested grid simulations from crashing when reading TOMS data]] | ||
| + | *[[Aerosol_optical_properties#Fix_to_jv_spec_aod.dat|Add fix to jv_spec_aod.dat file]] | ||
| + | *[[FAST-J photolysis mechanism#v9-02 post-release patch to fix bug in acetone photolysis pressure dependency|Post-release patch to fix bug in acetone photolysis pressure dependency]] | ||
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| + | |-valign="top" | ||
| + | |Miscellaneous | ||
| + | | | ||
| + | *[[GEOS-Chem_v9-02#Additional_bug_fixes_for_MAP_A2A_regridding_algorithm|Additional bug fixes for MAP_A2A regridding]] | ||
| + | *[[Regridding_in_GEOS-Chem#Bug_in_grid_mod.F90|Bug fix in grid_mod.F90]] | ||
| + | *[[GCAP#Fixed_bugs_caused_by_GIGC_edits|Fixed typos in GCAP code]] | ||
| + | *[[Linoz stratospheric ozone chemistry#Reactivate parallel DO loop in LINOZ_CHEMO3|Reactivate parallel DO loop in LINOZ_CHEMO3 routine]] | ||
| + | *[[Boundary_layer_mixing#Corrected_unit_conversion_bug_in_calls_to_SET_CH3Br.2C_SET_BrO_for_TURBDAY_PBL_mixing|Corrected unit conversion bug when TURBDAY PBL mixing is used]] | ||
| + | *[[GEOS-Chem_v9-02#Fixes_for_minor_technical_issues|Fixes for minor technical issues]] | ||
| + | |||
| + | |} | ||
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| + | --[[User:Bmy|Bob Y.]] ([[User talk:Bmy|talk]]) 21:00, 26 October 2015 (UTC) | ||
== Bugs and fixes in older GEOS-Chem versions == | == Bugs and fixes in older GEOS-Chem versions == | ||
Revision as of 21:00, 26 October 2015
On this page we list the GEOS-Chem specific bugs and issues that users have recently encountered, and how to fix them.
Please also be sure to visit our Common GEOS-Chem error messages wiki page for more general information about some frequently encountered errors. Also visit our Currently unresolved issues in GEOS-Chem wiki page to see a list of unresolved issues by GEOS-Chem version (and if they have been fixed in subsequent releases).
Contents
Issues resolved in GEOS-Chem v11-01
The following bugs and/or technical issues were resolved in GEOS-Chem v11-01:
| Module or area | Issue that was resolved |
|---|---|
| Chemistry | |
| Cloud convection | |
| Emissions (via HEMCO) | |
| Met fields and derived quantities | |
| RRTMG radiative transfer model | |
| Specialty simulations | |
| Structural updates | |
| Wet deposition |
|
--Bob Y. (talk) 17:05, 26 October 2015 (UTC)
Issues resolved in GEOS-Chem v10-01
The following bugs and/or technical issues were resolved in GEOS-Chem v10-01:
--Bob Y. (talk) 20:56, 26 October 2015 (UTC)
Issues resolved in GEOS-Chem v9-02
The following bugs and/or technical issues were resolved in GEOS-Chem v9-02.
--Bob Y. (talk) 21:00, 26 October 2015 (UTC)
Bugs and fixes in older GEOS-Chem versions
For a complete list of bugs and fixes in older GEOS-Chem versions, please see our Bugs and fixes prior to v9-02 wiki page.
--Bob Y. 17:40, 16 April 2015 (EDT) --Bob Y. 14:11, 20 May 2014 (EDT)
