Difference between revisions of "GEOS-Chem v10-01 benchmark history"
(→1-month benchmark with tropospheric chemistry) |
(→1-month benchmark with UCX chemistry) |
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|New features added into GEOS-Chem: | |New features added into GEOS-Chem: | ||
| | | | ||
+ | Features affecting the chemistry in this benchmark: | ||
+ | |||
*[[UCX chemistry mechanism|UCX strat chem mechanism]], includes: | *[[UCX chemistry mechanism|UCX strat chem mechanism]], includes: | ||
**[[UCX chemistry mechanism|Stratospheric chemistry]] | **[[UCX chemistry mechanism|Stratospheric chemistry]] | ||
Line 57: | Line 59: | ||
***[[FAST-JX v7.0 photolysis mechanism#Error_in_reducing_wavelength_bins_for_tropospheric_simulation|Bug fix in reducing wavelength bins for tropospheric simulation]] | ***[[FAST-JX v7.0 photolysis mechanism#Error_in_reducing_wavelength_bins_for_tropospheric_simulation|Bug fix in reducing wavelength bins for tropospheric simulation]] | ||
***[[FAST-JX_v7.0_photolysis_mechanism#VOC_photolysis_in_FAST-JX_v7.0|Updates to VOC photolysis in Fast-JX 7.0]] | ***[[FAST-JX_v7.0_photolysis_mechanism#VOC_photolysis_in_FAST-JX_v7.0|Updates to VOC photolysis in Fast-JX 7.0]] | ||
+ | |||
+ | Features not affecting the chemistry in this benchmark: | ||
+ | |||
*[[FAST-J photolysis mechanism#Bug_fix_for_determining_when_to_use_TOMS_O3_columns|Bug fix for determining when to use TOMS O3 columns]] | *[[FAST-J photolysis mechanism#Bug_fix_for_determining_when_to_use_TOMS_O3_columns|Bug fix for determining when to use TOMS O3 columns]] | ||
*[[GEOS-Chem Newsletter Summer-Fall 2013#TAU and KPPA|Add support for TAU performance profiler]] | *[[GEOS-Chem Newsletter Summer-Fall 2013#TAU and KPPA|Add support for TAU performance profiler]] |
Revision as of 18:24, 30 May 2014
On this page we have posted complete information about all benchmark simulations (both 1-month and 1-year) for GEOS-Chem v10-01.
Contents
1-yr benchmarks
TBD
1-month benchmarks
v10-01c
Because GEOS-Chem v10-01c was the version where we introduced the UCX chemistry mechanism, we performed two 1-month benchmark simulations:
- v10-01c_trop: 1-month benchmark with tropopsheric chemistry
- v10-01c_UCX: 1-month benchmark with UCX strat-trop chemistry (72 vertical levels)
--Bob Y. 13:15, 30 May 2014 (EDT)
Final recommendation for J-values
We were not able to include this final recommendation for J_values into the v10-01c_trop and v10-01c_UCX 1-month benchmarks. We will include these in the 1-year benchmarks for v10-01c.
Jingqiu Mao wrote:
- I have two more suggestions to the code and I think we then can finalize v10-01c. We can deal with unresolved J(VOC) later. Seb, please let me know if you think otherwise.
- For HAC, keep the QY as 0.6, but zero out the bins >335 nm.
- For PAN, change the reaction from
PAN = 0.6MCO3 + 0.6NO2 + 0.4MO2 + 0.4NO3
- to
PAN = 0.7MCO3 + 0.7NO2 + 0.3MO2 + 0.3NO3
Daniel Jacob replied:
- Thanks Jingqiu! If the 1-year benchmark run has already started just let it run - these changes will have very little effect except for HAC and we can just make a note of it. I'm glad that we resolved these J(VOC) issues thanks to Seb, Chris and Jingqiu. At this point we need to move on.
--Bob Y. 13:21, 30 May 2014 (EDT)
1-month benchmark with UCX chemistry
Here is the assessment form for 1-month benchmark simulation v10-01c with UCX chemistry (aka v10-01c_UCX).
Description | |
---|---|
New features added into GEOS-Chem: |
Features affecting the chemistry in this benchmark:
Features not affecting the chemistry in this benchmark:
|
Developer name(s) and institution(s): |
|
Version, resolution, met fields used: | v10-01, GEOS-FP (72L), 4x5, July 2013 |
1-month benchmark finished on: | Thu May 29 00:01:33 2014 |
Performance statistics: |
|
Compared to previous benchmark: | v10-01c with tropospheric chemistry |
This update will impact: (select all that apply with boldface) |
Advection, BL Mixing, Convection, Met Fields, Dry Dep, Wet Dep, Stratosphere, Anthro Emiss, Biogenic Emiss, Biomass Emiss, Photolysis, Chemistry, Other (please specify): |
Unit test results may be viewed at: | ftp://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/v10-01/v10-01c/v10-01c_UCX/v10-01c_Final.results.html |
Plots may be viewed at: | ftp://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/v10-01/v10-01c/v10-01c_UCX/ |
Metrics | |
Global mean OH (from log file): | 13.1136815995777 x 105 molec/cm3 |
Methyl chloroform lifetime: | 4.7459 years |
Did either of these change by more than 5%? | No. The mean OH differs by -3.77%, and the MCF lifetimes differ by 0.23%. |
At the SURFACE, list all species that changed by 10% or more: | NO, PAN, ALK4, ISOP, HNO3, H2O2, MEK, RCHO, MVK, MACR, PMN, PPN, PRPE, N2O5, HNO4, MP, DMS, SO4s, NH3, NIT, NITs, DST4, Br2, Br, BrO, HBr, BrNO2, BrNO3, MPN, ISOPN, MOBA, HAC, GLYC, MMN, RIP, IEPOX, NO2, NO3, HNO2, OH, HO2 |
Comments on SURFACE differences: |
|
At 500 hPa, list all species that changed by 10% or more: | NO, ALK4, ISOP, HNO3, MEK, RCHO, MVK, MACR, PMN, PRPE, C3H8, N2O5, HNO4, MP, DMS, SO2, NH3, NIT, NITs, DST4, Br2, Br, BrO, HBr, BrNO2, BrNO3, MPN, ISOPN, MOBA, HAC, GLYC, MMN, RIP, IEPOX, NO2, NO3, HNO2, OH, HO2 |
Comments on 500 hPa differences: |
|
In the ZONAL MEAN differences, list all species that changed by 10% or more: | All species, except for MSA and OCPI, changed by 10% or more. |
Comments on ZONAL MEAN differences: |
|
In the EMISSION RATIO maps, list all species that changed by 10% or more: | None |
Comments on EMISSION RATIO differences: |
|
Additional or summary comments: |
|
Approval | |
Requires further investigation: | NO |
Approved by: | Daniel Jacob, Jingqiu Mao, Sebastian Eastham |
Date of approval: | 29 May 2014 |
--Bob Y. 13:11, 30 May 2014 (EDT)
1-month benchmark with tropospheric chemistry
Here is the assessment form for 1-month benchmark simulation v10-01c with tropospheric chemistry (i.e. UCX off, aka v10-01c_trop).
Description | |
---|---|
New features added into GEOS-Chem: |
Changes affecting the chemistry in this benchmark: Changes not affecting the chemistry in this benchmark:
|
Developer name(s) and institution(s): |
|
Version, resolution, met fields used: | v10-01, GEOS-FP (47L), 4x5, July 2013 |
1-month benchmark finished on: | Wed May 28 17:57:45 2014 |
Performance statistics: |
|
Compared to previous benchmark: | v10-01b |
This update will impact: (select all that apply with boldface) |
Advection, BL Mixing, Convection, Met Fields, Dry Dep, Wet Dep, Stratosphere, Anthro Emiss, Biogenic Emiss, Biomass Emiss, Photolysis, Chemistry, Other (please specify): |
Unit test results may be viewed at: | ftp://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/v10-01/v10-01c/v10-01c_trop/v10-01c_Final.results.html |
Plots may be viewed at: | ftp://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/v10-01/v10-01c/v10-01c_trop |
Metrics | |
Global mean OH (from log file): | 13.6273583437531 x 105 molec/cm3 |
Methyl chloroform lifetime: | 4.7349 years |
Did either of these change by more than 5%? | No. The mean OH differs by -0.77%, and the MCF lifetimes differ by 1.37%. |
At the SURFACE, list all species that changed by 10% or more: | NO, PAN, ALK4, ISOP, H2O2, MEK, RCHO, MVK, MACR, PMN, PPN, PRPE, CH2O, N2O5, HNO4, MP, DMS, NIT, DST4, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, MPN, ISOPN, MOBA, PROPNN, HAC, GLYC, MMN, RIP, IEPOX, MAP, NO3, HNO2, OH, HO2 |
Comments on surface differences: |
|
At 500 hPa, list all species that changed by 10% or more: | NO, PAN, ALK4, ISOP, H2O2, ACET, MEK, MVK, MACR, PMN, PRPE, CH2O, N2O5, HNO4, MP, DMS, SO2, NH3, NIT, DST4, Br2, Br, BrO, BrNO2, BrNO3, ISOPN, MOBA, PROPNN, HAC, GLYC, MMN, RIP, IEPOX, MAP, NO2, NO3, HNO2 |
Comments on 500 hPa differences: |
|
In the ZONAL MEAN differences, list all species that changed by 10% or more: | NO, PAN, ALK4, ISOP, H2O2, ACET, MEK, MVK, MACR, PMN, PRPE, C3H8, CH2O, N2O5, MP, DMS, SO4s, NH3, NIT, NITs, Br2, Br, BrO, HOBr, BrNO2, BrNO3, MPN, ISOPN, MOBA, HAC, GLYC, MMN, RIP, IEPOX, MAP, NO3, HNO2, OH, HO2 |
Comments on ZONAL MEAN differences: |
|
In the EMISSION RATIO maps, list all species that changed by 10% or more: | None |
Comments on EMISSION RATIO differences: |
|
Additional or summary comments: |
|
Approval | |
Requires further investigation: | NO |
Approved by: | Daniel Jacob, Jingqiu Mao, Sebastian Eastham |
Date of approval: | 29 May 2014 |
--Bob Y. 14:20, 30 May 2014 (EDT)
v10-01b
Here is the assessment form for 1-month benchmark simulation v10-01b.
Description | |
---|---|
New features added into GEOS-Chem: | |
Developer name(s) and institution(s): |
|
Version, resolution, met fields used: | v10-01, GEOS-FP (47L), 4x5, July 2013 |
1-month benchmark finished on: | Wed Mar 5 15:06:00 EST 2014 |
Performance statistics: |
|
Compared to previous benchmark: | v10-01a |
This update will impact: (select all that apply with boldface) |
Advection, BL Mixing, Convection, Met Fields, Dry Dep, Wet Dep, Stratosphere, Anthro Emiss, Biogenic Emiss, Biomass Emiss, Photolysis, Chemistry, Other (please specify): |
Plots may be viewed at: | ftp://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/v10-01/v10-01b/ |
Metrics | |
Global mean OH (from log file): | 13.7339945052522 x 105 molec/cm3 |
Methyl chloroform lifetime: | 4.6706 years |
Did either of these change by more than 5%? | No. Both the mean OH and MCF lifetimes differ by < 0.01%. |
At the SURFACE, list all species that changed by 10% or more: | NO, ISOP, MVK, MACR, PMN, NIT, DST4, ISOPN, MOBA, RIP |
Comments on SURFACE differences: |
|
At 500 hPa, list all species that changed by 10% or more: | NO, ISOP, NH3, NIT, DST4, ISOPN, MOBA, RIP |
Comments on 500 hPa differences: |
|
In the ZONAL MEAN differences, list all species that changed by 10% or more: | ALK4, ISOP, C3H8, SO4s, NH3, NIT, GLYC, |
Comments on ZONAL MEAN differences: |
|
In the EMISSION RATIO maps, list all species that changed by 10% or more: | None |
Comments on EMISSION RATIO differences: | |
Additional or summary comments: |
|
Approval | |
Requires further investigation: | No |
Approved by: | Jenny Fisher, Fabien Paulot |
Date of approval: | 06 Mar 2014 |
--Melissa Sulprizio 11:34, 6 March 2014 (EST)
v10-01a
Here is the assessment form for 1-month benchmark simulation v10-01a.
Description | |
---|---|
New features added into GEOS-Chem: | |
Developer name(s) and institution(s): |
|
Version, resolution, met fields used: | v10-01, GEOS-FP (47L), 4x5, July 2013 |
1-month benchmark finished on: | Mon Feb 3 15:05:32 EST 2014 |
Performance statistics: |
|
Compared to previous benchmark: | v9-02r w/ GEOS-FP meteorology |
This update will impact: (select all that apply with boldface) |
Advection, BL Mixing, Convection, Met Fields, Dry Dep, Wet Dep, Stratosphere, Anthro Emiss, Biogenic Emiss, Biomass Emiss, Photolysis, Chemistry, Other (please specify): |
Plots may be viewed at: | ftp://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/v10-01/v10-01a/ |
Metrics | |
Global mean OH (from log file): | 13.7338316128900 x 105 molec/cm3 |
Methyl chloroform lifetime: | 4.6707 years |
Did either of these change by more than 5%? | No. The mean OH differs by -0.02%, and the MCF lifetimes differ by 0.07%. |
At the SURFACE, list all species that changed by 10% or more: | NO, O3, PAN, ISOP, HNO3, H2O2, MEK, ALD2, RCHO, MVK, MACR, PMN, PPN, R4N2, PRPE, N2O5, DMS, NH3, NH4, NIT, OCPI, DST4, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, MPN, ISOPN, MOBA, PROPNN, HAC, GLYC, MMN, RIP, IEPOX, MAP, NO3, OH |
Comments on SURFACE differences: |
|
At 500 hPa, list all species that changed by 10% or more: | NO, ISOP, MVK, MACR, PMN, PRPE, N2O5, DMS, NH3, NIT, DST4, Br2, ISOPN, MOBA, HAC, GLYC, MMN, RIP, IEPOX, NO3 |
Comments on 500 hPa differences: |
|
In the ZONAL MEAN differences, list all species that changed by 10% or more: | NO, ALK4, ISOP, MVK, MACR, PMN, PRPE, C3H8, N2O5, NH3, NIT, NITs, DST4, Br2, ISOPN, MOBA, HAC, GLYC, MMN, RIP, IEPOX |
Comments on ZONAL MEAN differences: |
|
In the EMISSION RATIO maps, list all species that changed by 10% or more: | ISOP, ACET, OC, PRPE, CO from monoterpenes |
Comments on EMISSION RATIO differences: |
|
Additional or summary comments: | We still need to determine what caused the changes in the MODIS LAI input files. As per our earlier discussion, we have put in an error trap in drydep_mod to make sure that the changes are only made for simulations using GEOS-FP and the Olson 2001 land map. |
Approval | |
Requires further investigation: | No |
Approved by: | Patrick Kim |
Date of approval: | 5 Feb 2014 |
--Melissa Sulprizio 12:16, 3 February 2014 (EST)