Difference between revisions of "GEOS-Chem no-diff-to-benchmark"

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!width="100px"|Model scope
 
!width="100px"|Model scope
 
!width="250px"|Notes and references
 
!width="250px"|Notes and references
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|Updates for GEOS-Chem 14.3 in CESM
 
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|Lizzie Lundgren (Harvard)
 
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|CESM
 
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|
 
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*[https://github.com/geoschem/geos-chem/pull/2154 geos-chem PR #2154]
 
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*[https://github.com/geoschem/Cloud-J/pull/2 Cloud-J PR #2]
 
  
 
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|-valign="top"
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|Add budget diagnostic option for fixed level vertical region
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|Config file update to avoid incorrect GCHP error catch for certain combinations of grid resolution and number of CPUs
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|Lizzie Lundgren (Harvard)
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|Lee Murray (Rochester)
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|Diagnostics
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|Bug fix &<br>GCHP
 
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|
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*[https://github.com/geoschem/geos-chem/pull/2127 geos-chem PR #2127]
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*[https://github.com/geoschem/geos-chem/pull/2363 geos-chem PR #2363]
  
 
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|-valign="top"
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|Fix geopotential height units in netCDF file
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|Add capability to run GEOS-Chem on CESM spectral-element dynamical core
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|Chris Holmes (FSU)
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|Haipeng Lin (Harvard)
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|Diagnostics
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|CESM
 
|
 
|
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*[https://github.com/geoschem/geos-chem/pull/2224 geos-chem PR #2224]
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*[https://github.com/geoschem/geos-chem/pull/2366 geos-chem PR #2366]
  
 
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|-valign="top"
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|Update the <tt>docs/requirements.yml</tt> to avoid security issues w/ old python versions (used to build the ReadTheDocs documentation)
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|Expand Cloud-J error handling to catch and pass errors up the call stack
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|Bob Yantosca (Harvard)
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|Lizzie Lundgren (Harvard)
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|Documentation
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|Cloud-J
 
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*[https://github.com/geoschem/GCClassic/issues/51 GCClassic #51]
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*[https://github.com/geoschem/geos-chem/pull/2353 geos-chem PR #2353]
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*[https://github.com/geoschem/GCHP/issues/393 GCHP #393]
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*[https://github.com/geoschem/Cloud-J/pull/19 Cloud-J PR #19]
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*[https://github.com/geoschem/HEMCO/issues/265 HEMCO #2147]
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|Fixes to restore proper handling of NEI 3D emissions
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|Configure number cloud levels used for photolysis in geoschem_config.yml and pass to Cloud-J
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|Nicholas Balasus (Harvard)
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|Emissions
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*[https://github.com/geoschem/geos-chem/pull/2213 geos-chem PR #2213]
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*[https://github.com/geoschem/HEMCO/pull/268 HEMCO PR #268]
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|-valign=top
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|Add debug-level printout for CAP.EXTDATA to show container name being read from ExtData.rc
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|Bob Yantosca (Harvard)<br>Lizzie Lundgren (Harvard)
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|GCHP
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|
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*[https://github.com/geoschem/MAPL/pull/31 geoschem/MAPL PR #31]
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|Fix bug in advection when using raw GMAO meteorology files
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|Lizzie Lundgren (Harvard)
 
|Lizzie Lundgren (Harvard)
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|GCHP advection
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|Photolysis
 
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*[https://github.com/geoschem/gchp/pull/392 GCHP PR #392]
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*[https://github.com/geoschem/geos-chem/pull/2342 geos-chem PR #2342]
 +
*[https://github.com/geoschem/Cloud-J/pull/17 Cloud-J PR #17]
  
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|-valign="top"
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|Add GCHP_WRAPPER C-preprocessor definition for use in submodules
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|Update Cloud-J from 7.7.1 to 7.7.2
 
|Lizzie Lundgren (Harvard)
 
|Lizzie Lundgren (Harvard)
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|GCHP
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|Cloud-J
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|
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*[https://github.com/geoschem/GCHP/pull/396 GCHP PR #396]
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|Fixes to run GEOS-Chem 14.3 in the NASA GEOS ESM
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|Lizzie Lundgren
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|GEOS
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*[https://github.com/geoschem/geos-chem/pull/2153 geos-chem PR #2155]
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*[https://github.com/geoschem/Cloud-J/releases/tag/7.7.2 Cloud-J 7.7.2]
  
 
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|Now use short submodule names in <tt>.gitmodules</tt>
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|Throw a CMake error if FAST-JX is used for any KPP mechanism except Hg
 
|Bob Yantosca (Harvard)
 
|Bob Yantosca (Harvard)
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|GitHub
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|Compilation
 
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*[https://github.com/geoschem/GCClassic/pull/52 GCClassic #52]
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*[https://github.com/geoschem/GCClassic/pull/62 GCClassic PR #62]
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*[https://github.com/geoschem/GCHP/pull/394 GCHP #394]
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*[https://github.com/geoschem/GCHP/pull/426 GCHP PR #426]
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*[https://github.com/geoschem/HEMCO/pull/266 HEMCO #266]
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|Add GitHub action for compile-only integration tests (GCClassic only for now)
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|Fix several issues with the GEOS-Chem Classic satellite diagnostics (SatDiagn and SatDiagnEdge collections)
 
|Bob Yantosca (Harvard)
 
|Bob Yantosca (Harvard)
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|GitHub
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|Diagnostics
 
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*[https://github.com/geoschem/GCClassic/pull/50 GCClassic #50]
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*[https://github.com/geoschem/geos-chem/pull/2369 geos-chem PR #2369]
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|Restrict volcano climatology prints to root thread
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|Christoph Keller (GMAO)
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|HEMCO
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*[https://github.com/geoschem/HEMCO/pull/263 HEMCO PR #263]
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|Run directory bug fixes for GEOS-IT meteorology
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|MAPL update: Horizontal flux regridding bug fix
 
|Lizzie Lundgren (Harvard)
 
|Lizzie Lundgren (Harvard)
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|Run directory
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|GCHP
 
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*[https://github.com/geoschem/geos-chem/pull/2153 geos-chem PR #2153]
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*[https://github.com/geoschem/MAPL/pull/36 MAPL PR #36]
  
 
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|Update operational run_scripts for the Harvard Cannon cluster
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|MAPL update: Add logger print in prefetch loop
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|Bob Yantosca (Harvard)
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|Lizzie Lundgren (Harvard)
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|Run directory
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|GCHP
 
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*[https://github.com/geoschem/geos-chem/pull/2100 geos-chem PR #2100]
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*[https://github.com/geoschem/MAPL/pull/35 MAPL PR #35]
  
 
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|Add operational run scripts for the Imperial College London cluster
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|Remove InvMEGAN manual diagnostics from hcox_megan_mod.F90
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|Seb Eastham (Imperial)
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|Eloise Marais (UCL)<br>Bob Yantosca (Harvard)
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|Run directory
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|HEMCO
 
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*[https://github.com/geoschem/geos-chem/pull/2138 geos-chem PR #2138]
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*[https://github.com/geoschem/HEMCO/pull/282 HEMCO PR #282]
  
 
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|-valign="top"
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|Add operational run scripts for the WashU Compute1 cluster
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|Update CESM HEMCO settings to incorporate new emissions since 14.1.2
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|Yidan Tang (WashU)
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|Lizzie Lundgren (Harvard)<br>Haipeng Lin (Harvard)
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|Run directory
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|CESM
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|-valign="top"
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|ObsPack bug fixes: (1) Use netCDF-F90 library routines; (2) Read obspack_id variable into a character array
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|Bob Yantosca (Harvard)
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|Structural
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|
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*[https://github.com/geoschem/geos-chem/pull/2177 geos-chem PR #2177]
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*[https://github.com/geoschem/geos-chem/issues/2170 geos-chem #2170]
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|-valign="top"
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|Add <tt>#SBATCH -c 1</tt> to Harvard Cannon GCHP run scripts and integration tests; Also allow <tt>-s none</tt> in integration tests
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|Bob Yantosca (Harvard)
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|Structural
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|
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*[https://github.com/geoschem/geos-chem/pull/2182 geos-chem PR #2182]
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*[https://github.com/geoschem/geos-chem/issues/2147 geos-chem #2147]
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* Needed after a SLURM update on the Harvard Cannon cluster
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|-valign="top"
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|Update integration & parallel test scripts to input the test type and reduce the number of input arguments
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|Bob Yantosca (Harvard)
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|Testing
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|
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*[https://github.com/geoschem/geos-chem/pull/2187 geos-chem PR #2187]
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−
 
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|-valign="top"
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|Update integration tests to pass quick option to compile scripts
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|Melissa Sulprizio (Harvard)
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|Testing
+
 
|
 
|
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*[https://github.com/geoschem/geos-chem/pull/2222 geos-chem PR #2222]
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*[https://github.com/geoschem/geos-chem/pull/2375 geos-chem PR #2375]
  
 
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Latest revision as of 19:33, 17 July 2024

GEOS-Chem Versions Page | GEOS-Chem model development priorities

This page includes information about the GEOS-Chem "no-diff-to-benchmark" development stream, which contains updates and fixes that will not affect the fullchem benchmark simulations. These updates are mergeable at any time, either into the next Y version or into a standalone Z version.

Updates that will not affect fullchem benchmark simulations

Feature Contributor(s) Model scope Notes and references
Config file update to avoid incorrect GCHP error catch for certain combinations of grid resolution and number of CPUs Lee Murray (Rochester) Bug fix &
GCHP
Add capability to run GEOS-Chem on CESM spectral-element dynamical core Haipeng Lin (Harvard) CESM
Expand Cloud-J error handling to catch and pass errors up the call stack Lizzie Lundgren (Harvard) Cloud-J
Configure number cloud levels used for photolysis in geoschem_config.yml and pass to Cloud-J Lizzie Lundgren (Harvard) Photolysis
Update Cloud-J from 7.7.1 to 7.7.2 Lizzie Lundgren (Harvard) Cloud-J
Throw a CMake error if FAST-JX is used for any KPP mechanism except Hg Bob Yantosca (Harvard) Compilation
Fix several issues with the GEOS-Chem Classic satellite diagnostics (SatDiagn and SatDiagnEdge collections) Bob Yantosca (Harvard) Diagnostics
MAPL update: Horizontal flux regridding bug fix Lizzie Lundgren (Harvard) GCHP
MAPL update: Add logger print in prefetch loop Lizzie Lundgren (Harvard) GCHP
Remove InvMEGAN manual diagnostics from hcox_megan_mod.F90 Eloise Marais (UCL)
Bob Yantosca (Harvard) 		HEMCO
Update CESM HEMCO settings to incorporate new emissions since 14.1.2 Lizzie Lundgren (Harvard)
Haipeng Lin (Harvard) 		CESM
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