GEOS-Chem 14.1.0: Difference between revisions

Revision as of 19:34, 10 January 2023

This page includes information about GEOS-Chem 14.1.0. The GEOS-Chem model development priorities page lists additional developments that may be added.

Version overview

This version is currently in development

The following items have been added to GEOS-Chem 14.1.0. Also see the following Github pages:

Feature	Contributor(s)	Model scope	Notes and references
Updates that will affect full-chemistry benchmark simulations
Adaptive chemical solver (as option) / KPP 3.0.0	Mike Long (Harvard) Haipeng Lin (Harvard) Bob Yantosca (GCST) Lu Shen (PKU)	Chemistry	See H. Lin et al. [2022] (DOI: 10.31223/X5505V) KPP 3.0.0 is now released
Add MO2 + NO3 reaction	Kelvin Bates (Harvard)	Chemistry	geoschem/geos-chem PR #1444 geoschem/geos-chem #1235
Revision to a rate constant for the C2H4 scheme	Kelvin Bates (Harvard)	Chemistry	geoschem/geos-chem PR #1447 geoschem/geos-chem #1274
Fix product in HOBr/Cl + S(IV) reactions	Xuan Wang (CUHK)	Chemistry	geoschem/geos-chem PR #1448 geoschem/geos-chem #1298
Fix molecular weight of CH4	Xueying Yu (UMN)	Chemistry	geoschem/geos-chem PR #1445 geoschem/geos-chem #1312
Bug fix for computing fraction land type	Lizzie Lundgren (Harvard)	Chemistry	geoschem/geos-chem PR #1425
Bug fix: Treat SO4s and NITs as coarse aerosol in wet scavenging	Mike Long (GMAO) Christoph Keller (GMAO) Becky Alexander (UW)	Wetdep	geoschem/geos-chem PR #1426 geoschem/geos-chem #1414
Bug fixes for handling sea salt alkalinity	Becky Alexander (UW) Hansen Cao (UW) Mike Long (GMAO) Mat Evans (York)	Fullchem simulations	geoschem/geos-chem #1506 geoschem/geos-chem #1547
Bug fix: Initialize CO2 to a relevant value for full-chemistry	Mike Long (GMAO)	Chemistry	geoschem/geos-chem #1529
Updates that will NOT affect full-chemistry benchmark simulations
HTAPv3 at 0.1 deg	Dandan Zhang (WashU)	Emissions	geoschem/geos-chem #1301
Improvements in modelled Hg0 dry deposition to land	Ari Feinberg (MIT) Noelle Selin (MIT) Thandolwethu Dlamini (MIT) Martin Jiskra (UBasel) Viral Shah (Harvard)	Hg simulation	geoschem/geos-chem PR #1367
AMAP 2015 emissions from GMA2018	Helene Angot(MIT) Ari Feinberg (MIT) Noelle Selin (MIT)	Hg simulation	geoschem/geos-chem PR #1367
Joint CO2-CO-CH4-OCS simulation via KPP	Beata Bukosa (NIWA) Kevin Bowman (JPL) Mike Long (Harvard)	Specialty simulation	Still in validation geoschem/geos-chem #654
Add gfortran compiler switches to turn on code sanitization, which checks for memory leaks	Bob Yantosca (Harvard)	Structural	github.com/GCClassic PR #24
Add capability to write metadata for defined species to a YAML file	Bob Yantosca (Harvard)	Structural	geoschem/geos-chem PR #1316
Output satellite diagnostics as NetCDF	Joshua Shutter (UMN) Eloise Marais (UCL) Bob Yantosca (Harvard)	Diagnostics	geoschem/geos-chem PR #1478
Add new species concentration diagnostic in units of molec/cm3	Haipeng Lin (Harvard)	Diagnostics	geoschem/geos-chem PR #1264
RO2 diagnostic	Melissa Sulprizio (Harvard)	Diagnostics	geoschem/geos-chem PR #1334
Retire land-water-ice (LWI) input field	Lizzie Lundgren (Harvard)	Met fields	geoschem/geos-chem PR #1435 geoschem/hemco PR #170
Structural updates to facilitate coupling GEOS-Chem to CESM: Move in-module variables in global_ch4_mod.F90 to State_Chm Remove SZAFACT, JNO2, JOH module variables from hco_interface_gc_mod.F90	Haipeng Lin (Harvard)	CESM-GC Structural	geoschem/geos-chem PR #1407 geoschem/geos-chem PR #1348
Fix complex SOA definition in error check	Haipeng Lin (Harvard)	ComplexSOA	geoschem/geos-chem PR #1546
Updates that will only affect GCHP
Update MAPL from v2.18.3 to v2.26.0	Lizzie Lundgren (Harvard)	GCHP GMAO libraries	geoschem/MAPL PR #23 geoschem/geos-chem PR #1489
Fix missing value handling in HEMCO for GCHP and GEOS	Lizzie Lundgren (Harvard)	HEMCO	geoschem/MAPL PR #21 geoschem/HEMCO PR #171
Improve MAPL error handling of corrupted input files	Lizzie Lundgren (Harvard)	MAPL	geoschem/MAPL PR #24
Fix missing value handling in GCHP	Lizzie Lundgren (Harvard)	GCHP/GEOS	geoschem/gchp #258
Fix bug where GCHP fraction snow is all zeroes	Lizzie Lundgren (Harvard)	Met fields	geoschem/geos-chem PR #1577
Tagged O3 simulation in GCHP	Xingpei Yu (PKU) Jourdan He (WashU)	TagO3 simulation	geoschem/geos-chem PR #1167
GCHP diagnostic bug fixes: Add missing J-value diagnostics to GCHP HISTORY.rc Fix bug in GCHP HISTORY.rc names for HCFCs	Melissa Sulprizio (Harvard) Lizzie Lundgren (Harvard)	Diagnostics	geoschem/geos-chem PR #1582 geoschem/geos-chem PR #1590
Add GCHP operational example run scripts (Pleiades, MIT, York)	Jourdan He (WashU) Sebastian Eastham (MIT) Killian Murphy (York)	Run directory	geoschem/geos-chem PR #1563 geoschem/geos-chem PR #1571 geoschem/geos-chem PR #1570

New data directories

The following data directories have been added or updated in this version. You will have to download the directories relevant to your simulation.

Inventory	Simulations	What was added?	Directory
Updated CH4 files (Fixes netCDF file issues)	CH4 carboncycle	CH4loss from GMI (netCDF longitudes fixed) EDGARv6 emissions (netCDF timestamps fixed) GEPA emissions (netCDF files edited for COARDS compliance) Lakes emissions (netCDF files edited for COARDS compliance) Scarpelli_Mexico emissions (netCDF files edited for COARDS compliance)	`ExtData/HEMCO/CH4/v2022-11/`
Updated CO2 files (Fixes netCDF file issues)	CO2 carboncycle	FOSSIL (netCDF longitudes fixed) OCEAN (netCDF longitudes fixed)	`ExtData/HEMCO/CO2/v2022-11/`
2018 AMAP/UNEP Global Mercury Assessment Emissions	Hg	Emissions of Hg0, Hg2, HgP (base year 2015) are provided for the following sectors Artisanal/small scale gold mining, Power generation Industry Other intentional uses.	`ExtData/HEMCO/MERCURY/v2022-10/`
OCS_FLUX	carboncycle	OCS surface fluxes from model simulations by JPL (provided by Kevin Bowman)	`ExtData/HEMCO/OCS_FLUX/v2022-11`
Restart files	carboncycle fullchem TOMAS	GEOS-Chem Classic & GCHP restart files for the 14.1.0 fullchem and TOMAS simulations with PRO2 (family species) added GEOS-Chem Classic & GCHP restart files for the 14.1.0 carboncycle simulation	TBD

1-month benchmarks

TBD

1-year benchmarks

TBD

@@ Line 36: / Line 36: @@
 |Chemistry
 |
-*See [https://github.com/geoschem/geos-chem/pull/1444 geoschem/geos-chem PR #1444]
+*[https://github.com/geoschem/geos-chem/pull/1444 geoschem/geos-chem PR #1444]
-*See [https://github.com/geoschem/geos-chem/issues/1235 geoschem/geos-chem #1235]
+*[https://github.com/geoschem/geos-chem/issues/1235 geoschem/geos-chem #1235]
 |-valign="top"
@@ Line 44: / Line 44: @@
 |Chemistry
 |
-*See [https://github.com/geoschem/geos-chem/pull/1447 geoschem/geos-chem PR #1447]
+*[https://github.com/geoschem/geos-chem/pull/1447 geoschem/geos-chem PR #1447]
-*See [https://github.com/geoschem/geos-chem/issues/1274 geoschem/geos-chem #1274]
+*[https://github.com/geoschem/geos-chem/issues/1274 geoschem/geos-chem #1274]
 |-valign="top"
@@ Line 52: / Line 52: @@
 |Chemistry
 |
-*See [https://github.com/geoschem/geos-chem/pull/1448 geoschem/geos-chem PR #1448]
+*[https://github.com/geoschem/geos-chem/pull/1448 geoschem/geos-chem PR #1448]
-*See [https://github.com/geoschem/geos-chem/issues/1298 geoschem/geos-chem #1298]
+*[https://github.com/geoschem/geos-chem/issues/1298 geoschem/geos-chem #1298]
 |-valign="top"
@@ Line 60: / Line 60: @@
 |Chemistry
 |
-*See [https://github.com/geoschem/geos-chem/pull/1445 geoschem/geos-chem PR #1445]
+*[https://github.com/geoschem/geos-chem/pull/1445 geoschem/geos-chem PR #1445]
-*See [https://github.com/geoschem/geos-chem/issues/1312 geoschem/geos-chem #1312]
+*[https://github.com/geoschem/geos-chem/issues/1312 geoschem/geos-chem #1312]
 |-valign="top"
@@ Line 68: / Line 68: @@
 |Chemistry
 |
-*See [https://github.com/geoschem/geos-chem/pull/1425 geoschem/geos-chem PR #1425]
+*[https://github.com/geoschem/geos-chem/pull/1425 geoschem/geos-chem PR #1425]
 |-valign="top"
@@ Line 75: / Line 75: @@
 |Wetdep
 |
-*See [https://github.com/geoschem/geos-chem/issues/1426 geoschem/geos-chem PR #1426]
+*[https://github.com/geoschem/geos-chem/issues/1426 geoschem/geos-chem PR #1426]
-*See [https://github.com/geoschem/geos-chem/issues/1414 geoschem/geos-chem #1414]
+*[https://github.com/geoschem/geos-chem/issues/1414 geoschem/geos-chem #1414]
 |-valign="top"
@@ Line 83: / Line 83: @@
 |Fullchem simulations
 |
-*See [https://github.com/geoschem/geos-chem/issues/1506 geoschem/geos-chem #1506]
+*[https://github.com/geoschem/geos-chem/issues/1506 geoschem/geos-chem #1506]
-*See [https://github.com/geoschem/geos-chem/issues/1547 geoschem/geos-chem #1547]
+*[https://github.com/geoschem/geos-chem/issues/1547 geoschem/geos-chem #1547]
 |-valign="top"
@@ Line 91: / Line 91: @@
 |Chemistry
 |
-*See [https://github.com/geoschem/geos-chem/issues/1529 geoschem/geos-chem #1529]
+*[https://github.com/geoschem/geos-chem/issues/1529 geoschem/geos-chem #1529]
 |-valign="top"
@@ Line 101: / Line 101: @@
 |Emissions
 |
-*See [https://github.com/geoschem/geos-chem/issues/1301 geoschem/geos-chem #1301]
+*[https://github.com/geoschem/geos-chem/issues/1301 geoschem/geos-chem #1301]
 |-valign="top"
@@ Line 108: / Line 108: @@
 |Hg simulation
 |
-* See [https://github.com/geoschem/geos-chem/pull/1367 geoschem/geos-chem PR #1367]
+*[https://github.com/geoschem/geos-chem/pull/1367 geoschem/geos-chem PR #1367]
 |-valign="top"
@@ Line 115: / Line 115: @@
 |Hg simulation
 |
-* See [https://github.com/geoschem/geos-chem/pull/1367 geoschem/geos-chem PR #1367]
+*[https://github.com/geoschem/geos-chem/pull/1367 geoschem/geos-chem PR #1367]
 |-valign="top"
@@ Line 130: / Line 130: @@
 |Structural
 |
-*See [https://github.com/geoschem/GCClassic/pull/24 github.com/GCClassic PR #24]
+*[https://github.com/geoschem/GCClassic/pull/24 github.com/GCClassic PR #24]
 |-valign="top"
@@ Line 137: / Line 137: @@
 |Structural
 |
-*See [https://github.com/geoschem/geos-chem/pull/1316 geoschem/geos-chem PR #1316]
+*[https://github.com/geoschem/geos-chem/pull/1316 geoschem/geos-chem PR #1316]
 |-valign="top"
@@ Line 144: / Line 144: @@
 |Diagnostics
 |
-*See [https://github.com/geoschem/geos-chem/pull/1478 geoschem/geos-chem PR #1478]
+*[https://github.com/geoschem/geos-chem/pull/1478 geoschem/geos-chem PR #1478]
 |-valign="top"
@@ Line 151: / Line 151: @@
 |Diagnostics
 |
-*See [https://github.com/geoschem/geos-chem/pull/1264 geoschem/geos-chem PR #1264]
+*[https://github.com/geoschem/geos-chem/pull/1264 geoschem/geos-chem PR #1264]
 |-valign="top"
@@ Line 159: / Line 158: @@
 |Diagnostics
 |
-* See [https://github.com/geoschem/geos-chem/pull/1334 geoschem/geos-chem PR #1334]
+*[https://github.com/geoschem/geos-chem/pull/1334 geoschem/geos-chem PR #1334]
 |-valign="top"
@@ Line 166: / Line 165: @@
 |Met fields
 |
-*See [https://github.com/geoschem/geos-chem/pull/1435 geoschem/geos-chem PR #1435]
+*[https://github.com/geoschem/geos-chem/pull/1435 geoschem/geos-chem PR #1435]
-*See [https://github.com/geoschem/HEMCO/pull/170 geoschem/hemco PR #170]
+*[https://github.com/geoschem/HEMCO/pull/170 geoschem/hemco PR #170]
 |-valign="top"
@@ Line 176: / Line 175: @@
 |CESM-GC<br>Structural
 |
-*See [https://github.com/geoschem/geos-chem/pull/1407 geoschem/geos-chem PR #1407]
+*[https://github.com/geoschem/geos-chem/pull/1407 geoschem/geos-chem PR #1407]
-*See [https://github.com/geoschem/geos-chem/pull/1348 geoschem/geos-chem PR #1348]
+*[https://github.com/geoschem/geos-chem/pull/1348 geoschem/geos-chem PR #1348]
+|-valign="top"
+|[https://github.com/geoschem/geos-chem/pull/1546 Fix complex SOA definition in error check]
+|Haipeng Lin (Harvard)
+|ComplexSOA
+|
+*[https://github.com/geoschem/geos-chem/pull/1546 geoschem/geos-chem PR #1546]
 |-valign="top"
@@ Line 187: / Line 193: @@
 |GCHP<br>GMAO libraries
 |
-*See [https://github.com/geoschem/MAPL/pull/23 geoschem/MAPL PR #23]
+*[https://github.com/geoschem/MAPL/pull/23 geoschem/MAPL PR #23]
-*See [https://github.com/geoschem/geos-chem/pull/1489 geoschem/geos-chem PR #1489]
+*[https://github.com/geoschem/geos-chem/pull/1489 geoschem/geos-chem PR #1489]
 |-valign="top"
@@ Line 195: / Line 201: @@
 |HEMCO
 |
-*See [https://github.com/geoschem/MAPL/pull/21 geoschem/MAPL PR #21]
+*[https://github.com/geoschem/MAPL/pull/21 geoschem/MAPL PR #21]
-*See [https://github.com/geoschem/HEMCO/pull/171 geoschem/HEMCO PR #171]
+*[https://github.com/geoschem/HEMCO/pull/171 geoschem/HEMCO PR #171]
 |-valign="top"
@@ Line 203: / Line 209: @@
 |MAPL
 |
-*See [https://github.com/geoschem/MAPL/pull/24 geoschem/MAPL PR #24]
+*[https://github.com/geoschem/MAPL/pull/24 geoschem/MAPL PR #24]
 |-valign="top"
@@ Line 210: / Line 216: @@
 |GCHP/GEOS
 |
-*See [https://github.com/geoschem/GCHP/issues/258 geoschem/gchp #258]
+*[https://github.com/geoschem/GCHP/issues/258 geoschem/gchp #258]
 |-valign="top"
@@ Line 235: / Line 241: @@
 *[https://github.com/geoschem/geos-chem/pull/1582 geoschem/geos-chem PR #1582]
 *[https://github.com/geoschem/geos-chem/pull/1590 geoschem/geos-chem PR #1590]
+|-valign="top"
+|Add GCHP operational example run scripts (Pleiades, MIT, York)
+|Jourdan He (WashU)<br>Sebastian Eastham (MIT)<br>Killian Murphy (York)
+|Run directory
+|
+*[https://github.com/geoschem/geos-chem/pull/1563 geoschem/geos-chem PR #1563]
+*[https://github.com/geoschem/geos-chem/pull/1571 geoschem/geos-chem PR #1571]
+*[https://github.com/geoschem/geos-chem/pull/1570 geoschem/geos-chem PR #1570]
 |}

GEOS-Chem 14.1.0: Difference between revisions

Revision as of 19:34, 10 January 2023

Contents

Version overview

New data directories

1-month benchmarks

1-year benchmarks

Navigation menu

GEOS-Chem 14.1.0: Difference between revisions

Revision as of 19:34, 10 January 2023

Version overview

New data directories

1-month benchmarks

1-year benchmarks

Navigation menu

Search