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| | == feel free to experiment here == | | == feel free to experiment here == |
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| − | <!-- ===== TOP TITLE ===== -->
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| − | <table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding=5" align="center">
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| − | <tr bgcolor="#FF0000">
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| − | <th colspan="2" height="80" valign="middle"><p><font color="#FFFFFF" size="+3">GEOS–Chem Wiki</font></p></th>
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| − | <blockquote><p align="justify">The [http://acmg.seas.harvard.edu/geos/ GEOS–Chem model] is a global 3-D model of atmospheric composition driven by assimilated meteorological observations from the Goddard Earth Observing System (GEOS) of the [http://www.as.harvard.edu NASA Global Modeling and Assimilation Office]. It is applied by [http://acmg.seas.harvard.edu/geos/geos_people.html research groups around the world] to a wide range of atmospheric composition problems, Central management and support of the model is provided by the [http://acmg.seas.harvard.edu/index.html Atmospheric Chemistry Modeling Group at Harvard University.]</p></blockquote>
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| − | <blockquote><p align="justify">This wiki is meant to facilitate communication between GEOS-Chem users and developers. If this is '''your first time here''', check out [[Features of the GEOS-Chem public wiki|the features page]]. If you would like to contribute to the wiki, please register as a user by clicking ''create account'' at the top right corner of this page.</p></blockquote>
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| − | <blockquote><p align="justify">New information is continually being added to the wiki, so please check back here often, or even better, [[Features_of_the_GEOS-Chem_public_wiki#Let_the_GEOS-Chem_wiki_inform_you_of_recent_changes.21|subscribe to the recent changes' RSS feed]]: you will not miss a discussion!</p></blockquote>
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| − | <!-- ======================================================== -->
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| − | <!-- ===== GENERAL INFO ABOUT GEOS-CHEM ===== -->
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| − | <!-- ======================================================== -->
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| − | <p> </p>
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| − | <table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
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| − | <tr bgcolor="#00AAAA">
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| − | <th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">General information about GEOS–Chem</font></p></th>
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| − | <!-- ===== GENERAL INFO : FIRST ROW ===== -->
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| − | <!-- Header title -->
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| − | <tr bgcolor="#cccccc">
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| − | <th width="50%"scope="col"><big>Introduction and overview</big></th>
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| − | <th width="50%"scope="col"><big>Steering Committee And Working Groups</big></th>
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| − | </tr>
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| − | <tr>
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| − | <!-- Introduction & Overview: Links -->
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| − | <td width="50%" valign="top">
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| − | * [[Features of the GEOS-Chem public wiki]]
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| − | * [[GEOS-Chem welcome letter for new users]]
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| − | * [http://acmg.seas.harvard.edu/geos/geos_overview.html GEOS-Chem Overview]
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| − | * [http://acmg.seas.harvard.edu/geos/geos_people.html GEOS-Chem People & Projects]
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| − | * [http://acmg.seas.harvard.edu/geos/word_pdf_docs/resources_guidelines_tips.pdf User Resources, Code Development Guidelines, and Debugging Tips]
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| − | * [[GEOS-Chem programming staff]]
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| − | * [[GEOS-Chem newsletters]]
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| − | <!-- Steering Committee and Working Groups: Links -->
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| − | <td width="50%" valign="top">
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| − | * [http://acmg.seas.harvard.edu/geos/geos_steering_cmte.html GEOS-Chem Steering Committee]
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| − | ** [[GEOS-Chem model development priorities]]
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| − | * [http://acmg.seas.harvard.edu/geos/geos_working_groups.html GEOS-Chem Working Groups]
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| − | ** [[GEOS-Chem Adjoint|Adjoint Model and Data Assimilation Working Group]]
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| − | ** [[Aerosols_overview:_projects_and_developments|Aerosols Working Group]]
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| − | ** [[Carbon Gases and Organics Working Group]]
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| − | ** [[Emissions Working Group]]
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| − | ** [[Chemistry Issues|Oxidants and Chemistry Working Group]]
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| − | ** [[Regional Air Quality Working Group]]
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| − | </td>
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| − | <!-- ===== GENERAL INFO : SECOND ROW ===== -->
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| − | <!-- Header title -->
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| − | <tr bgcolor="#cccccc">
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| − | <th width="50%"scope="col"><big>Getting Started With GEOS-Chem</big></th>
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| − | <th width="50%"scope="col"><big>General Technical Information</big></th>
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| − | </tr>
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| − | <!-- Getting Started With GEOS-Chem: Links -->
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| − | <td width="50%" valign="top">
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| − | * [[Minimum system requirements for GEOS-Chem]]
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| − | * [[GEOS-Chem supported platforms and compilers]]
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| − | * [[Downloading GEOS-Chem source code and data]]
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| − | * [[GEOS-Chem code development cycle]]
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| − | * [[GEOS-Chem programming resources]] (e.g. tutorials, user guides, etc.)
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| − | * [http://acmg.seas.harvard.edu/geos/doc/man/appendix_7.html GEOS-Chem Programming Style Guide]
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| − | * [[Running GEOS-Chem with TESTRUN]]
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| − | </td>
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| − | <!-- General Technical Information: Links -->
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| − | <td width="50%" valign="top">
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| − | * [[Initial conditions for GEOS-Chem]]
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| − | * [[GEOS-Chem Debugging Tips|Tips on how to debug GEOS-Chem effectively]]
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| − | * [[Reporting GEOS-Chem bugs]]
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| − | * [[Parallelizing GEOS-Chem]] with the OpenMP directives
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| − | * [[Common GEOS-Chem error messages]]
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| − | * [http://acmg.seas.harvard.edu/geos/geos_search.html GEOS-Chem Search Engines]
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| − | </td>
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| − | </table>
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| − | <!-- ======================================================== -->
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| − | <!-- ===== CODE DEVELOPER'S FORUMS: TITLE ===== -->
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| − | <!-- ======================================================== -->
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| − | <p> </p>
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| − | <table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
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| − | <tr bgcolor="#00AAAA">
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| − | <th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">GEOS–Chem Code Developers' Forums</font></p></th>
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| − | </tr>
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| − | <!-- ===== CODE DEVELOPER'S FORUMS : FIRST ROW ===== -->
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| − | <tr bgcolor="#cccccc">
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| − | <th width="50%"scope="col"><big>Coding</big></th>
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| − | <th width="50%"scope="col"><big>Diagnostics</big></th>
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| − | </tr>
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| − | <tr>
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| − | <!-- Coding: Links -->
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| − | <td width="50%" valign="top">
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| − | * [[GEOS-Chem versions under development]]
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| − | * [[Machine issues & portability]]
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| − | * [[Floating point math issues]]
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| − | * [[Bugs and fixes|List of GEOS-Chem bugs and in which version they were resolved]]
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| − | </td>
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| − | <!-- Diagnostics: Links -->
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| − | <td width="50%" valign="top">
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| − | * [http://acmg.seas.harvard.edu/geos/doc/man/appendix_5.html Overview of diagnostics characteristics]
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| − | * [[Mass Flux (ND24/25/26)]]
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| − | * [[Additional diagnostics]]
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| − | </td>
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| − | <!-- ======================================================== -->
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| − | <!-- ===== CODE DEVELOPER'S FORUMS : SECOND ROW ===== -->
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| − | <tr bgcolor="#cccccc">
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| − | <th width="50%"scope="col"><big>Emissions</big></th>
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| − | <th width="50%"scope="col"><big>Chemistry</big></th>
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| − | </tr>
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| − | <tr>
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| − | <!-- Emissions: Links -->
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| − | <td width="50%" valign="top">
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| − | * [[Overview]]
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| − | * [[Aircraft emissions]]
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| − | * [[Anthropogenic emissions]]
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| − | ** [http://acmg.seas.harvard.edu/geos/word_pdf_docs/emissions_v8_02_03.pdf Description of anthropogenic emissions inventories in GEOS-Chem v8-02-03]
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| − | ** [http://wiki.seas.harvard.edu/geos-chem/images/Anth_emiss_gc_v8-01-04.pdf Description of anthropogenic emissions inventories in GEOS-Chem v8-01-04]
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| − | ** [http://acmg.seas.harvard.edu/geos/word_pdf_docs/INVENTORY_GC_public-pre_v8.pdf Table of available anthropogenic emissions inventories for use w/ GEOS-Chem (pre-v8)]
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| − | * [[Biofuel emissions]]
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| − | * [[Biogenic emissions]]
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| − | * [[Biomass burning emissions]]
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| − | * [[Lightning NOx emissions]]
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| − | </td>
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| − | <!-- Chemistry Links -->
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| − | <td width="50%" valign="top">
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| − | * [[Chemistry Issues]]
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| − | * [[NOx-Ox-HC-aerosol|NOx-Ox-hydrocarbon-aerosol (aka "full-chemistry") simulation]]
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| − | * [[Photolysis mechanism]]
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| − | * [[Mercury|Mercury simulation]]
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| − | * [[Tagged CO simulation]]
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| − | * [[KPP solvers FAQ]]
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| − | * [[Isoprene]]
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| − | * [[Linoz stratospheric ozone chemistry]]
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| − | </td>
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| − | </tr>
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| − | <!-- ===== CODE DEVELOPER'S FORUMS : THIRD ROW ===== -->
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| − | <tr bgcolor="#cccccc">
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| − | <th width="50%"scope="col"><big>Nested Grid Simulations</big></th>
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| − | <th width="50%"scope="col"><big>Earth System Model Framework</big></th>
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| − | </tr>
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| − | <!-- Nested Grid Simulations: Links -->
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| − | <td width="50%" valign="top">
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| − | * [[GEOS-Chem nested grid simulations]]
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| − | * [[Available met data for nested grid simulations]]
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| − | ** [http://acmg.seas.harvard.edu/geos/wiki_docs/nested_grids/geos_data_downloads.pdf Protocol for nested-grid data downloads]
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| − | </td>
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| − | <!-- Met Fields: Links -->
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| − | <td width="50%" valign="top">
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| − | * [[Installing ESMF and other required libraries]]
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| − | * [[Code development with the Earth System Model Framework]]
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| − | * [[Automatic documentation with protex|Generating automatic LaTeX documentation with protex]]
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| − | ** [http://frodo.elon.edu/tutorial/tutorial/tutorial.html Web-based LaTeX tutorial]
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| − | </td>
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| − | </tr>
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| − | <!-- ======================================================== -->
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| − | <!-- ===== CODE DEVELOPER'S FORUMS : FOURTH ROW ===== -->
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| − | <!-- ======================================================== -->
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| − | <tr bgcolor="#cccccc">
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| − | <th width="50%"scope="col"><big>Related Projects</big></th>
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| − | <th width="50%"scope="col"><big></big></th>
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| − | </tr>
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| − | <!-- Related Projects: Links -->
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| − | <td width="50%" valign="top">
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| − | * [[GEOS-Chem column code]]
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| − | * [[GEOS-Chem Adjoint]]
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| − | * [[GEOS-Chem Near-Real-Time Simulations]]
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| − | </td>
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| − | <!-- Diagnostics: Links -->
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| − | <!-- ===== CODE DEVELOPER'S FORUMS: TITLE ===== -->
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| − | <p> </p>
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| − | <table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
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| − | <tr bgcolor="#00AAAA">
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| − | <th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">Reference: Visualization, Analysis, and Wiki</font></p></th>
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| − | </tr>
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| − | <!-- ===== VISUALIZATION : FIRST ROW ===== -->
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| − | <th width="50%"scope="col"><big>IDL</big></th>
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| − | <th width="50%"scope="col"><big>GAMAP</big></th>
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| − | </tr>
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| − | <!-- IDL: Links -->
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| − | * [http://www.ittvis.com/ ITT Visualization (vendor)]
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| − | * [http://idlastro.gsfc.nasa.gov/idl_html_help/Structures.html Structures in IDL]
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| − | * [http://idlastro.gsfc.nasa.gov/idl_html_help/Pointers.html Pointers in IDL]
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| − | * [http://idlastro.gsfc.nasa.gov/idl_html_help/Overview_of_Mathematics_in_IDL.html Overview of Mathematics in IDL]
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| − | * [http://www.dfanning.com/ Coyote's Guide to IDL Programming (David Fanning's Web Site)] - Lots of tips on how to accomplish programming tasks
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| − | * [http://www.mpimet.mpg.de/en/misc/software/idl IDL Page at Max Planck Institute for Meteorology]
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| − | * [http://www.mpimet.mpg.de/en/misc/software/idl/doc/mgs_script.pdf Martin Schultz's IDL Tutorial (PDF Format)]
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| − | * [http://idlastro.gsfc.nasa.gov/homepage.html IDL Astronomy User's Library]
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| − | * [http://fermi.jhuapl.edu/s1r/idl/idl.html JHU/APL/S1R IDL routines page]
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| − | * [http://cow.physics.wisc.edu/~craigm/idl/idl.html Craig Markwardt's IDL library]
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| − | * [http://cimss.ssec.wisc.edu/~gumley/doc/idltips.pdf The Underground Guide to IDL by Liam Gumley (PDF)]
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| − | * [[Reading binary files in IDL]]
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| − | </td>
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| − | <td width="50%" valign="top">
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| − | * [http://acmg.seas.harvard.edu/gamap/ GAMAP web page]
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| − | * [http://acmg.seas.harvard.edu/gamap/doc/ GAMAP on-line users' guide]
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| − | * [[GAMAP bugs and fixes]]
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| − | * [[GAMAP tips and tricks]]
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| − | **[[General GAMAP usage]]
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| − | **[[File I/O with GAMAP]]
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| − | ***[http://acmg.seas.harvard.edu/gamap/doc/timeseries_brief_tutorial.pdf Working with timeseries output in GAMAP]
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| − | **[[Color and graphics with GAMAP]]
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| − | *** [http://acmg.seas.harvard.edu/geos/wiki_docs/gamap/gamap_color_table_file.pdf Loading Color Tables in GAMAP v2.12]
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| − | *** [http://acmg.seas.harvard.edu/forum_files/cdh_ColorInIDL.pdf Working with color in IDL by Chris Holmes]
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| − | **[[Regridding with GAMAP]]
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| − | **[[Date and time computations with GAMAP]]
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| − | **[[Text manipulation with GAMAP]]
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| − | </td>
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| − | <th width="50%"scope="col"><big>Wiki Documentation</big></th>
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| − | <th width="50%"scope="col"><big></big></th>
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| − | </tr>
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| − | <!-- Wiki Documentation: Links -->
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| − | * [[Sandbox]]
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| − | * [http://www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
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| − | * [http://meta.wikimedia.org/wiki/Help:Contents MediaWiki User's Guide]
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| − | * [http://meta.wikimedia.org/wiki/Help:Wikitext Examples of Wiki markup text]
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| − | * [http://meta.wikimedia.org/wiki/Help:Reference_card One-page editing reference card]
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| − | * [http://www.mediawiki.org/wiki/Manual:Configuration_settings Configuration Settings list]
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| − | * [http://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
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