Difference between revisions of "GEOS-Chem v11-02 benchmark history"
(→v11-02a) |
(→1-year full-chemistry benchmarks) |
||
Line 3: | Line 3: | ||
== 1-year full-chemistry benchmarks == | == 1-year full-chemistry benchmarks == | ||
− | + | === v11-01-public-release-Run0 === | |
+ | |||
+ | Three GEOS-Chem model versions were compared to each other: | ||
+ | |||
+ | {| border=1 cellspacing=0 cellpadding=5 | ||
+ | |-valign="top" bgcolor="#CCCCCC" | ||
+ | !Color | ||
+ | !Quantity Plotted | ||
+ | !Met Type | ||
+ | !Year | ||
+ | !Updates affecting the benchmark simulation | ||
+ | !Annual Mean OH<br>[10<sup>5</sup> molec/cm3] | ||
+ | |||
+ | |-valign="top" | ||
+ | |<span style="color:red">'''Red'''</span> | ||
+ | |[[GEOS-Chem v11-01 benchmark history#v11-01k-Run0|v11-01k-Run0]] | ||
+ | |GEOS-FP,<br>72L, 4x5 | ||
+ | |2013 | ||
+ | | | ||
+ | '''Updates introduced in [[GEOS-Chem v11-01#v11-01h|v11-01h]]:''' | ||
+ | *[[GEOS-Chem_v11-01#Incorrect_incorporation_of_moisture_in_GEOS-Chem_air_quantities|Fix to remove moisture signature in dry mixing ratio]] | ||
+ | '''Updates introduced in [[GEOS-Chem v11-01#v11-01i|v11-01i]]:''' | ||
+ | *[[Wet_deposition#Fix_bug_in_GEOS-FP.2FMERRA.2FMERRA-2_re-evaporation_calculation|Fix bug in GEOS-FP/MERRA/MERRA-2 re-evaporation calculation]] | ||
+ | '''Updates introduced in [[GEOS-Chem v11-01#v11-01j|v11-01j]]:''' | ||
+ | *[[Implementation_of_HEMCO_in_GEOS-Chem#Features_added_in_v11-01j|Update to HEMCO v2.0.003]], includes: | ||
+ | **Bug fix for PARANOX extension | ||
+ | **Fix for ocean overlap in timezones mask file | ||
+ | *[[CAC_anthropogenic_emissions#High_resolution_emissions|0.1° x 0.1° CAC emissions]] | ||
+ | *[[Implementation_of_RETRO_Anthropogenic_Emissions#RETRO_anthropogenic_propane_emissions_are_too_low|Replace RETRO C3H8 emissions with emissions from Xiao 2008]], includes: | ||
+ | **Overwrite Xiao C2H6 and C3H8 with MIX and NEI2011 regional inventories | ||
+ | *[[EDGAR_v4.2_anthropogenic_emissions#Correct_bug_in_units_of_EDGAR_v4.2_SO2_emissions|Correct bug in units of EDGAR v4.2 SO2 emissions]] | ||
+ | *[[EDGAR_v4.2_anthropogenic_emissions#Prevent_biofuel_emissions_from_being_double_counted|Prevent biofuel emissions from being double counted in EDGAR v4.2]] | ||
+ | *[[New_isoprene_scheme#Set_ACTA_and_HCOOH_to_active_in_globchem.dat|Set ACTA and HCOOH to active]] | ||
+ | *[[UCX_chemistry_mechanism#Fix_for_mesospheric_NOx_chemistry|Fix for mesospheric NOx chemistry]] | ||
+ | *[[GEOS-Chem v11-01#Fix_molecular_weight_of_N2O5|Fix molecular weight of N2O5]] | ||
+ | '''Updates introduced in [[GEOS-Chem v11-01#v11-01k|v11-01k]]:''' | ||
+ | *[[Lightning_NOx_emissions#Update_WEST_NS_DIV_to_fix_ozone_overestimate_in_southern_US|Lightning update based on Travis et al. (2016, ACP) and Zhang et al. (2014, ACP)]] | ||
+ | |12.004 | ||
+ | |||
+ | |-valign="top" | ||
+ | |<span style="color:green">'''Green'''</span> | ||
+ | |[[GEOS-Chem v11-01 benchmark history#v11-01-public-release-Run0|v11-01-public-release-Run0]] | ||
+ | |GEOS-FP,<br>72L, 4x5 | ||
+ | |2013 | ||
+ | | | ||
+ | '''Updates introduced in [[GEOS-Chem v11-01#v11-01 public release|v11-01 public release]]:''' | ||
+ | *[[Regridding_in_GEOS-Chem#Bug_fix:_MAP_A2A_now_only_uses_periodic_BCs_for_global_data|Bug fix: MAP_A2A now applies periodic boundary conditions only to global data sets during regridding]] | ||
+ | *[[Implementation_of_HEMCO_in_GEOS-Chem#Ocean_grid_boxes_now_use_the_timezone_of_the_nearest_land_mass_for_computing_emissions|Ocean grid boxes now use the timezone of the nearest land mass for computing emissions]] | ||
+ | |12.001 | ||
+ | |||
+ | |-valign="top" | ||
+ | |<span style="color:blue">'''Blue'''</span> | ||
+ | |[[GEOS-Chem v11-02 benchmark history#v11-02a-Run0|v11-02a-Run0]] | ||
+ | |GEOS-FP,<br>72L, 4x5 | ||
+ | |2013 | ||
+ | | | ||
+ | '''Updates introduced in [[GEOS-Chem v11-02#v11-02a|v11-02a]]:''' | ||
+ | *[[Updates_in_JPL_Publication_15-10|Update chemistry rate constants based on ''JPL Publication 15-10'']] | ||
+ | *[[Chemistry_Issues#Fixes_to_correct_ALK4_lumping_issue|Fixes to correct ALK4 lumping issue]] | ||
+ | *[[PAN|PAN updates (including emissions, deposition, species, chemistry)]] | ||
+ | *[[EPA/NEI11_North_American_emissions#Monthly_mean_emissions|Monthly mean NEI2011 emissions]] | ||
+ | *Bug fixes in the GEOS-Chem sulfate module: | ||
+ | **[[Sulfate_aerosols#Fix_error_in_production_of_SO4s.2C_NITs_in_SEASALT_CHEM_routine|Fix error in production of SO4s and NITs in <tt>SEASALT_CHEM</tt>]] | ||
+ | **[[Sulfate_aerosols#Fix_bug_in_CHEM_NIT_routine|Fix bug in <tt>CHEM_NIT</tt>]] | ||
+ | **[[Sulfate_aerosols#Fix_for_sulfate_production_in_HET_DROP_CHEM|Fix for sulfate production in <tt>HET_DROP_CHEM</tt>]] | ||
+ | **[[Sulfate_aerosols#Fix_bugs_in_sulfate_chemistry_routines|Fix bugs in sulfate chemistry routines]] | ||
+ | *[[Dry_deposition#Bug_in_computation_of_aerodynamic_resistance_RA|Fix bug in dry deposition aerodynamic resistance]] | ||
+ | *[[GEOS-Chem_v11-01#Bug_in_cos.28SZA.29_for_start_of_timestep|Bug fix in cos(SZA) for start of timestep]] | ||
+ | *[[GEOS-Chem_v11-02#Include_TOA_pressure_when_calculating_dry_pressure_edges|Include TOA pressure when calculating dry pressure edges]] | ||
+ | | | ||
+ | |||
+ | |-valign="top" | ||
+ | |'''Black''' | ||
+ | |Observations | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | | | ||
+ | |} | ||
+ | |||
+ | The output plots for Run0 may be downloaded from: | ||
+ | |||
+ | ftp ftp.as.harvard.edu | ||
+ | cd gcgrid/geos-chem/1yr_benchmarks/v11-02/v11-02a/Run0/output | ||
+ | mget * | ||
+ | |||
+ | You may also view the PDF files online by pointing your browser to | ||
+ | |||
+ | http://ftp.as.harvard.edu/gcgrid/geos-chem/1yr_benchmarks/v11-02/v11-02a/Run0/output/ | ||
+ | |||
+ | Please also view the following pages comparing this version to past 1-year benchmarks: | ||
+ | *[[Global_Burden_History#Global_Tropospheric_Aerosol_Burdens|Global Tropospheric Aerosol Burdens]] | ||
+ | *[[Global_Burden_History#Global_Tropospheric_Mean_Aerosol_Optical_Depth|Global Tropospheric Mean Aerosol Optical Depth]] | ||
+ | |||
+ | --[[User:Melissa Payer|Melissa Sulprizio]] ([[User talk:Melissa Payer|talk]]) 18:14, 10 May 2017 (UTC) | ||
== 1-month benchmarks == | == 1-month benchmarks == |
Revision as of 18:14, 10 May 2017
On this page we have posted complete information about all benchmark simulations (both 1-month and 1-year) for GEOS-Chem v11-02.
Contents
1-year full-chemistry benchmarks
v11-01-public-release-Run0
Three GEOS-Chem model versions were compared to each other:
The output plots for Run0 may be downloaded from:
ftp ftp.as.harvard.edu cd gcgrid/geos-chem/1yr_benchmarks/v11-02/v11-02a/Run0/output mget *
You may also view the PDF files online by pointing your browser to
http://ftp.as.harvard.edu/gcgrid/geos-chem/1yr_benchmarks/v11-02/v11-02a/Run0/output/
Please also view the following pages comparing this version to past 1-year benchmarks:
--Melissa Sulprizio (talk) 18:14, 10 May 2017 (UTC)
1-month benchmarks
v11-02a
Here is the assessment form for 1-month benchmark simulation v11-02a.
Description | |||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
New features added into GEOS-Chem |
| ||||||||||||||||||||||||||||||||||||||||||||||
Version, resolution, met fields used: | v11-02, GEOS-FP (72L), 4x5, July 2013 | ||||||||||||||||||||||||||||||||||||||||||||||
1-month benchmark finished on: | Sun Apr 16 01:37:36 EDT 2017 | ||||||||||||||||||||||||||||||||||||||||||||||
Performance statistics: |
| ||||||||||||||||||||||||||||||||||||||||||||||
Compared to previous benchmark: | v11-01 public release | ||||||||||||||||||||||||||||||||||||||||||||||
This update will impact: (select all that apply with boldface) |
Advection, BL Mixing, Convection, Met Fields, Dry Dep, Wet Dep, Stratosphere, Anthro Emiss, Biogenic Emiss, Biomass Emiss, Photolysis, Chemistry, Other (please specify): | ||||||||||||||||||||||||||||||||||||||||||||||
Unit test results may be viewed at: | http://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/v11-02/v11-02a/v11-02a.results.html | ||||||||||||||||||||||||||||||||||||||||||||||
Plots may be viewed at: | http://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/v11-02/v11-02a/ | ||||||||||||||||||||||||||||||||||||||||||||||
Metrics | |||||||||||||||||||||||||||||||||||||||||||||||
Global mean OH (from log file): | 12.3128108012973 x 105 molec/cm3 | ||||||||||||||||||||||||||||||||||||||||||||||
Methyl chloroform lifetime: | 5.1159 years | ||||||||||||||||||||||||||||||||||||||||||||||
Did either of these change by more than 5%? | No. Mean OH changed by -2.57% and MCF lifetime changed by 2.94%. These changes were primarily caused by two updates:
| ||||||||||||||||||||||||||||||||||||||||||||||
At the SURFACE, list all species that changed by 10% or more: | NO, O3, PAN, CO, ALK4, ISOP, HNO3, H2O2, ACET, MEK, ALD2, RCHO, MVK, MACR, PMN, PPN, R4N2, PRPE, C3H8, CH2O, C2H6, N2O5, HNO4, MP, DMS, SO2, SO4, SO4s, MSA, NH3, NH4, NIT, NITs, BCPI, OCPI, BCPO, OCPO, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, CHBr3, MPN, ISOPND, ISOPNB, MOBA, PROPNN, HAC, GLYC, MVKN, MACRN, RIP, IEPOX, MAP, NO2, NO3, HNO2, BrCl, HCl, Cl, ClO, HOCl, ClNO3, ClOO, OClO, Cl2, Cl2O2, MTPA, LIMO, MTPO, TSOG1, TSOG2, TSOG2, TSOG0, TSOA1, TSOA2, TSOA3, TSOA0, ISOG1, ISOG2, ISOG3, ISOA1, ISOA2, ISOA3, BENZ, TOLU, XYLE, ASOG1, ASOG2, ASO3G3, ASOAN, ASOA1, ASOA2, ASOA3, OH, HO2 | ||||||||||||||||||||||||||||||||||||||||||||||
Comments on SURFACE differences: |
Below we summarize the notable changes caused by specific updates. Update chemistry rate constants based on JPL Publication 15-10
Monthly mean NEI2011 emissions
Bug fixes in the GEOS-Chem sulfate module:
Fix bug in dry deposition aerodynamic resistance
The following updates impacted species concentrations slightly, but the changes did not amount to >10%. | ||||||||||||||||||||||||||||||||||||||||||||||
At 500 hPa, list all species that changed by 10% or more: | NO, PAN, CO, ALK4, ISOP, HNO3, H2O2, ACET, MEK, ALD2, RCHO, MVK, MACR, PMN, PPN, R4N2, PRPE, C3H8, CH2O, C2H6, N2O5, HNO4, MP, DMS, SO2, SO4, SO4s, MSA, NH3, NH4, NIT, NITs, BCPI, OCPI, BCPO, OCPO, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, CHBr3, MPN, ISOPND, ISOPNB, MOBA, PROPNN, HAC, GLYC, MVKN, MACRN, RIP, IEPOX, MAP, NO2, NO3, HNO2, BrCl, Cl, ClO, HOCl, ClNO3, ClOO, OClO, Cl2, Cl2O2, MTPA, LIMO, MTPO, TSOG1, TSOG2, TSOG2, TSOG0, TSOA1, TSOA2, TSOA3, TSOA0, ISOG1, ISOG2, ISOG3, ISOA1, ISOA2, ISOA3, BENZ, TOLU, XYLE, ASOG1, ASOG2, ASO3G3, ASOAN, ASOA1, ASOA2, ASOA3, OH, HO2 | ||||||||||||||||||||||||||||||||||||||||||||||
Comments on 500 hPa differences: | See comments on surface differences. | ||||||||||||||||||||||||||||||||||||||||||||||
In the ZONAL MEAN differences, list all species that changed by 10% or more: | NO, PAN, ALK4, ISOP, HNO3, H2O2, MEK, ALD2, RCHO, MVK, MACR, PMN, PPN, PRPE, C3H8, CH2O, N2O5, HNO4, MP, DMS, SO2, SO4, SO4s, NH3, NH4, NIT, NITs, BCPI, OCPI, BCPO, OCPO, Br2, Br, BrO, HOBr, HBr, BrNO2, CHBr3, MPN, ISOPND, ISOPNB, MOBA, HAC, GLYC, MVKN, MACRN, RIP, IEPOX, MAP, NO2, NO3, HNO2, BrCl, Cl, ClO, HOCl, ClNO3, ClOO, OClO, Cl2, Cl2O2, MTPA, LIMO, MTPO, TSOG1, TSOG2, TSOG3, TSOG0, TSOA1, TSOA2, TSOA3, TSOA0, ISOG1, ISOG2, ISOG3, ISOA1, ISOA2, ISOA3, BENZ, TOLU, XYLE, ASOG1, ASOG2, ASOG3, ASOAN, ASOA1, ASOA2, ASOA3, OH, HO2 | ||||||||||||||||||||||||||||||||||||||||||||||
Comments on ZONAL MEAN differences: | See comments on surface differences. | ||||||||||||||||||||||||||||||||||||||||||||||
In the EMISSION RATIO maps, list all species that changed by 10% or more: |
| ||||||||||||||||||||||||||||||||||||||||||||||
Comments on EMISSION RATIO differences: |
| ||||||||||||||||||||||||||||||||||||||||||||||
Additional or summary comments: | Results from our v11-02a benchmark using the GNU Fortran Compiler
In order to evaluate the performance of GEOS-Chem using the the free and open source GNU Fortran compiler, we performed an additional 1-month benchmark for v11-02a. For this additional benchamark, we used GNU Fortran v6.2.0 to compile GEOS-Chem instead of our usual Intel Fortran Compiler version 11.1.069. For more details, see this post on our GNU Fortran compiler wiki page. Summary: The benchmark using GNU Fortran yielded essentially identical results to the benchmark using Intel Fortran. This is very encouraging, as it will allow GEOS-Chem development to take place on computational platforms that do not have proprietary compilers (such as Intel Fortran or PGI Fortran), which can be prohibitively expensive to purchase. | ||||||||||||||||||||||||||||||||||||||||||||||
Approval | |||||||||||||||||||||||||||||||||||||||||||||||
Requires further investigation: | TBD | ||||||||||||||||||||||||||||||||||||||||||||||
Approved by: | TBD | ||||||||||||||||||||||||||||||||||||||||||||||
Date of approval: | TBD |
--Melissa Sulprizio (talk) 19:27, 20 April 2017 (UTC)
1-year Rn-Pb-Be benchmarks
TBD