Difference between revisions of "GEOS-Chem v11-01"
From Geos-chem
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!width="200px"|Submitted by | !width="200px"|Submitted by | ||
!width="250px"|Status | !width="250px"|Status | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|[[Aerosols_Working_Group#Organic_Aerosol_Density_.28v.10-01.29|Density of OA update]] | |[[Aerosols_Working_Group#Organic_Aerosol_Density_.28v.10-01.29|Density of OA update]] | ||
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|Melanie Hammer (Dalhousie)<br>Eloïse Marais (Harvard) | |Melanie Hammer (Dalhousie)<br>Eloïse Marais (Harvard) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|[[Mineral_dust_aerosols#Surface_chemistry_on_dust|Acid uptake on dust aerosols]] | |[[Mineral_dust_aerosols#Surface_chemistry_on_dust|Acid uptake on dust aerosols]] | ||
|Science | |Science | ||
|T. Duncan Fairlie (NASA/LARC) | |T. Duncan Fairlie (NASA/LARC) | ||
| − | | | + | | |
| + | *Delivered to [[GEOS-Chem Support Team|GCST]] | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|[[NOx-Ox-HC-aerosol#Monthly mean surface distributions|Monthly mean surface methane distributions]] | |[[NOx-Ox-HC-aerosol#Monthly mean surface distributions|Monthly mean surface methane distributions]] | ||
| Line 196: | Line 200: | ||
|Lee Murray (NASA GISS/LDEO) | |Lee Murray (NASA GISS/LDEO) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|[[MEGAN_biogenic_emissions#CO2_direct_effect_on_isoprene_emissions|CO2 direct effect on isoprene emissions]] | |[[MEGAN_biogenic_emissions#CO2_direct_effect_on_isoprene_emissions|CO2 direct effect on isoprene emissions]] | ||
|Science | |Science | ||
|Amos Tai (CUHK) | |Amos Tai (CUHK) | ||
| − | | | + | | |
| + | *Delivered to [[GEOS-Chem Support Team|GCST]] (Nov 3013) | ||
| + | |||
| + | |-valign="top" | ||
| + | |Criegee intermediates | ||
| + | |Science | ||
| + | |Dylan Millet (U. Minnesota)<br>Eloïse Marais (Harvard) | ||
| + | | | ||
| + | *Delivered to [[GEOS-Chem Support Team|GCST]] (Nov 3013) | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|[[Mineral_dust_aerosols#Improved_dust_size_distribution_scheme|Improved dust size distribution scheme]] | |[[Mineral_dust_aerosols#Improved_dust_size_distribution_scheme|Improved dust size distribution scheme]] | ||
|Science | |Science | ||
|Li Zhang (Colorado U.)<br>Daven Henze (Colorado U.) | |Li Zhang (Colorado U.)<br>Daven Henze (Colorado U.) | ||
| − | | | + | | |
| + | *Delivered to [[GEOS-Chem Support Team|GCST]] (Jan 2014) | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|[[Sulfate_aerosols#Metal_catalyzed_oxidation_of_SO2|Metal catalyzed oxidation of SO2]] (as a switch) | |[[Sulfate_aerosols#Metal_catalyzed_oxidation_of_SO2|Metal catalyzed oxidation of SO2]] (as a switch) | ||
| Line 211: | Line 227: | ||
|Becky Alexander (UW) | |Becky Alexander (UW) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|[[Aerosol_optical_properties#Implementation_of_optical_properties_for_brown_carbon|Addition of BrC UV absorption to address impacts on OH]] | |[[Aerosol_optical_properties#Implementation_of_optical_properties_for_brown_carbon|Addition of BrC UV absorption to address impacts on OH]] | ||
| Line 216: | Line 233: | ||
|Melanie Hammer (Dalhousie) | |Melanie Hammer (Dalhousie) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Update MODIS LAI fields through 2015 | |Update MODIS LAI fields through 2015 | ||
| Line 221: | Line 239: | ||
|Barron Henderson (UF) | |Barron Henderson (UF) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Flexchem | |Flexchem | ||
| Line 226: | Line 245: | ||
|Mike Long (Harvard) | |Mike Long (Harvard) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Updated organic deposition | |Updated organic deposition | ||
| Line 231: | Line 251: | ||
|Katie Travis (Harvard)<br>Jenny Fisher (U. Wollongong) | |Katie Travis (Harvard)<br>Jenny Fisher (U. Wollongong) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Hg emission update: NEI, EDGAR, NPRI, UNEP | |Hg emission update: NEI, EDGAR, NPRI, UNEP | ||
| Line 236: | Line 257: | ||
|[[Mercury|Hg and POPs WG]] | |[[Mercury|Hg and POPs WG]] | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Optimized ocean rate coefficients for Hg simulation | |Optimized ocean rate coefficients for Hg simulation | ||
| Line 241: | Line 263: | ||
|Shaojie Song (MIT) | |Shaojie Song (MIT) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Update offline oxidant fields for Hg simulation | |Update offline oxidant fields for Hg simulation | ||
| Line 246: | Line 269: | ||
|Viral Shah (UW)<br>Johan Schmidt (Harvard) | |Viral Shah (UW)<br>Johan Schmidt (Harvard) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Dry deposition updates for Hg simulation | |Dry deposition updates for Hg simulation | ||
| Line 251: | Line 275: | ||
|Bess Corbitt (Harvard) | |Bess Corbitt (Harvard) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|New atmospheric Hg redox mechanism | |New atmospheric Hg redox mechanism | ||
| Line 256: | Line 281: | ||
|Hannah Horowitz (Harvard) | |Hannah Horowitz (Harvard) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|GTMM revision | |GTMM revision | ||
| Line 261: | Line 287: | ||
|Bess Corbitt (Harvard) | |Bess Corbitt (Harvard) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|EPA-derived BC/OA emissions over US (1990-2012) | |EPA-derived BC/OA emissions over US (1990-2012) | ||
| Line 266: | Line 293: | ||
|David Ridley (MIT) | |David Ridley (MIT) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Update density of BC to 1.8 and add absorption enhancement factor in input.geos | |Update density of BC to 1.8 and add absorption enhancement factor in input.geos | ||
| Line 271: | Line 299: | ||
|Xuan Wang (MIT) | |Xuan Wang (MIT) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Updates to isoprene chemistry, includes: | |Updates to isoprene chemistry, includes: | ||
| Line 278: | Line 307: | ||
|Jenny Fisher (U. Wollongong)<br>Eloïse Marais (Harvard)<br>Kelvin Bates (Caltech)<br>Katie Travis (Harvard) | |Jenny Fisher (U. Wollongong)<br>Eloïse Marais (Harvard)<br>Kelvin Bates (Caltech)<br>Katie Travis (Harvard) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Nighttime isoprene chemistry updates | |Nighttime isoprene chemistry updates | ||
| Line 283: | Line 313: | ||
|Rebecca Schwantes (Caltech) | |Rebecca Schwantes (Caltech) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Remove dependence of species drydep on HNO3 drydep | |Remove dependence of species drydep on HNO3 drydep | ||
| Line 288: | Line 319: | ||
|Katie Travis (Harvard)<br>Jenny Fisher (U. Wollongong) | |Katie Travis (Harvard)<br>Jenny Fisher (U. Wollongong) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Arctic Hg cycling | |Arctic Hg cycling | ||
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|Jenny Fisher (U. Wollongong) | |Jenny Fisher (U. Wollongong) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Uniformity of units | |Uniformity of units | ||
| Line 298: | Line 331: | ||
|Lizzie Lundgren ([[GEOS-Chem Support Team]]) | |Lizzie Lundgren ([[GEOS-Chem Support Team]]) | ||
|TBD | |TBD | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
|-valign="top" | |-valign="top" | ||
|A snow NOx source from deep snowpack | |A snow NOx source from deep snowpack | ||
| Line 308: | Line 337: | ||
|Maria Zatko (UW)<br>Becky Alexander (UW) | |Maria Zatko (UW)<br>Becky Alexander (UW) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Land cover module in GEOS-Chem | |Land cover module in GEOS-Chem | ||
| Line 313: | Line 343: | ||
|Jeffrey Geddes (MIT)<br>Michael Long (Harvard) | |Jeffrey Geddes (MIT)<br>Michael Long (Harvard) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Merge standard simulation with specialty simulations for OVOC, acids, aromatics, dicarbonyls, terpenes | |Merge standard simulation with specialty simulations for OVOC, acids, aromatics, dicarbonyls, terpenes | ||
| Line 318: | Line 349: | ||
|Dylan Millet (UMN)<br>Xin Chen (UMN) | |Dylan Millet (UMN)<br>Xin Chen (UMN) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Harmonizing Henry's Law coefficients across wet and dry deposition (SO2 treated as effective Henry's Law) | |Harmonizing Henry's Law coefficients across wet and dry deposition (SO2 treated as effective Henry's Law) | ||
| Line 323: | Line 355: | ||
|Duncan Fairlie (NASA/LARC)<br>Daniel Jacob (Harvard)<br>Prasad Kasibhatla (Duke)<br>Becky Alexander (UW) | |Duncan Fairlie (NASA/LARC)<br>Daniel Jacob (Harvard)<br>Prasad Kasibhatla (Duke)<br>Becky Alexander (UW) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|NetCDF output: Flexible diagnostic package and tracer restart file | |NetCDF output: Flexible diagnostic package and tracer restart file | ||
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|[[GEOS-Chem Support Team]] | |[[GEOS-Chem Support Team]] | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Automate redistribution of NOx in HEMCO | |Automate redistribution of NOx in HEMCO | ||
| Line 333: | Line 367: | ||
|Lee Murray (NASA GISS/LDEO) | |Lee Murray (NASA GISS/LDEO) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Injection height for fire emissions | |Injection height for fire emissions | ||
| Line 338: | Line 373: | ||
|Emily Fischer (CSU) | |Emily Fischer (CSU) | ||
|TBD | |TBD | ||
| + | |||
|-valign="top" | |-valign="top" | ||
|Improved lightning emission scheme | |Improved lightning emission scheme | ||
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|} | |} | ||
| − | --[[User:Melissa Payer|Melissa Sulprizio]] ([[User talk:Melissa Payer|talk]]) 18: | + | --[[User:Melissa Payer|Melissa Sulprizio]] ([[User talk:Melissa Payer|talk]]) 18:08, 17 June 2015 (UTC) |
=== New data directories === | === New data directories === | ||
Revision as of 18:08, 17 June 2015
Contents
Overview
History
The table below shows the previous, current, and successive versions of GEOS-Chem:
| Previous version | This version | Next version |
|---|---|---|
| GEOS-Chem v10-01 | GEOS-Chem v11-01 | TBD |
| PROVISIONAL RELEASE 01 May 2015 | TBD | TBD |
| View v10-01 benchmark history | View v11-01 benchmark history | TBD |
--Melissa Sulprizio 10:30, 5 May 2015 (EDT)
What's new in this version
NOTE: v11-01a, v11-02b, etc. denote 1-month benchmark simulations, which are designed to evaluate GEOS-Chem's performance at intermediate stages of development.
v11-01a
Please see the Benchmark approval form for GEOS-Chem v11-01a for complete information about the validation of GEOS-Chem v10-01a.
| Feature | Type | Submitted by | Status |
|---|---|---|---|
| Correctly incorporate moisture into air quantity calculations and tracer unit conversions | Science & Bug fix |
Lizzie Lundgren (GEOS-Chem Support Team) | TBD |
--Bob Y. 13:33, 5 May 2015 (EDT)
v11-01b
NOTE: This version will require a 1-month benchmark simulation and a 1-year benchmark simulation.
| Feature | Type | Submitted by | Status |
|---|---|---|---|
| Fix to direct/diffuse radiation | Science & Bug fix |
Katie Travis | TBD |
| Fix for NO3 + ISOP product (currently not a tracer; no deposition) | Science | Katie Travis | " " |
| Save curtains out along flight track | Science | SEAC4RS Team | " " |
| OVOC dry deposition as described in Nguyen et al. [2014] | Science | SEAC4RS Team | " " |
| Various dry deposition updates | Science | SEAC4RS Team | " " |
Lightning updates, including:
|
Science | SEAC4RS Team | " " |
Add scaling options for NEI2008/NEI2011:
|
Science | SEAC4RS Team | " " |
| Scale down soil NOx by 50% on the basis of comparison to OMI | Science | SEAC4RS Team | " " |
| Update OA molecular weight | Science | SEAC4RS Team | " " |
--Melissa Sulprizio (talk) 18:23, 16 June 2015 (UTC)
v11-01c
NOTE: This version will require a 1-month benchmark simulation and 1-year benchmark simulation.
| Feature | Type | Submitted by | Status |
|---|---|---|---|
| Update DMS climatology to Lana | Science | Tom Breider (Harvard) | TBD |
| Impaction scavenging for hydrophobic BC | Science | Qiaoqiao Wang (Max Planck Institute) | " " |
| Homogeneous IN removal | Science | Qiaoqiao Wang (Max Planck Institute) | " " |
| Online emission of marine primary organic aerosol (POA) | Science | Brett Gantt (NCSU) Matthew Johnson (NASA Ames) |
" " |
--Melissa Sulprizio (talk) 18:23, 16 June 2015 (UTC)
v11-01d
NOTE: This version will require a 1-month benchmark simulation only.
| Feature | Type | Submitted by | Status |
|---|---|---|---|
| Updates to PAH code | Science | Carey Friedman (MIT) | TBD |
| Remove in-plume reduction of Hg | Science | Yanxu Zhang (Harvard) | " " |
--Melissa Sulprizio (talk) 18:23, 16 June 2015 (UTC)
In the pipeline
The following features are slated for inclusion in GEOS-Chem v11-01:
| Feature | Type | Submitted by | Status |
|---|---|---|---|
| Density of OA update | Science | Melanie Hammer (Dalhousie) Eloïse Marais (Harvard) |
TBD |
| Acid uptake on dust aerosols | Science | T. Duncan Fairlie (NASA/LARC) |
|
| Monthly mean surface methane distributions | Science | Lee Murray (NASA GISS/LDEO) | TBD |
| CO2 direct effect on isoprene emissions | Science | Amos Tai (CUHK) |
|
| Criegee intermediates | Science | Dylan Millet (U. Minnesota) Eloïse Marais (Harvard) |
|
| Improved dust size distribution scheme | Science | Li Zhang (Colorado U.) Daven Henze (Colorado U.) |
|
| Metal catalyzed oxidation of SO2 (as a switch) | Science | Becky Alexander (UW) | TBD |
| Addition of BrC UV absorption to address impacts on OH | Science | Melanie Hammer (Dalhousie) | TBD |
| Update MODIS LAI fields through 2015 | Science | Barron Henderson (UF) | TBD |
| Flexchem | Science | Mike Long (Harvard) | TBD |
| Updated organic deposition | Science | Katie Travis (Harvard) Jenny Fisher (U. Wollongong) |
TBD |
| Hg emission update: NEI, EDGAR, NPRI, UNEP | Science | Hg and POPs WG | TBD |
| Optimized ocean rate coefficients for Hg simulation | Science | Shaojie Song (MIT) | TBD |
| Update offline oxidant fields for Hg simulation | Science | Viral Shah (UW) Johan Schmidt (Harvard) |
TBD |
| Dry deposition updates for Hg simulation | Science | Bess Corbitt (Harvard) | TBD |
| New atmospheric Hg redox mechanism | Science | Hannah Horowitz (Harvard) | TBD |
| GTMM revision | Science | Bess Corbitt (Harvard) | TBD |
| EPA-derived BC/OA emissions over US (1990-2012) | Science | David Ridley (MIT) | TBD |
| Update density of BC to 1.8 and add absorption enhancement factor in input.geos | Science | Xuan Wang (MIT) | TBD |
Updates to isoprene chemistry, includes:
|
Science | Jenny Fisher (U. Wollongong) Eloïse Marais (Harvard) Kelvin Bates (Caltech) Katie Travis (Harvard) |
TBD |
| Nighttime isoprene chemistry updates | Science | Rebecca Schwantes (Caltech) | TBD |
| Remove dependence of species drydep on HNO3 drydep | Science | Katie Travis (Harvard) Jenny Fisher (U. Wollongong) |
TBD |
| Arctic Hg cycling | Science | Jenny Fisher (U. Wollongong) | TBD |
| Uniformity of units | Science | Lizzie Lundgren (GEOS-Chem Support Team) | TBD |
| A snow NOx source from deep snowpack | Science | Maria Zatko (UW) Becky Alexander (UW) |
TBD |
| Land cover module in GEOS-Chem | Science | Jeffrey Geddes (MIT) Michael Long (Harvard) |
TBD |
| Merge standard simulation with specialty simulations for OVOC, acids, aromatics, dicarbonyls, terpenes | Science | Dylan Millet (UMN) Xin Chen (UMN) |
TBD |
| Harmonizing Henry's Law coefficients across wet and dry deposition (SO2 treated as effective Henry's Law) | Science | Duncan Fairlie (NASA/LARC) Daniel Jacob (Harvard) Prasad Kasibhatla (Duke) Becky Alexander (UW) |
TBD |
| NetCDF output: Flexible diagnostic package and tracer restart file | Science | GEOS-Chem Support Team | TBD |
| Automate redistribution of NOx in HEMCO | Science | Lee Murray (NASA GISS/LDEO) | TBD |
| Injection height for fire emissions | Science | Emily Fischer (CSU) | TBD |
| Improved lightning emission scheme | Science | Lee Murray (NASA GISS/LDEO) | TBD |
--Melissa Sulprizio (talk) 18:08, 17 June 2015 (UTC)
New data directories
The following new data directories have been added for GEOS-Chem v11-01. You will have to download the directories relevant to your simulation.
- TBD
Validation
In this section we provide information about the benchmarks and tests that we have done to validate GEOS-Chem v11-01.
1-month and 1-year benchmarks
For complete information about the benchmark simulations used to validate GEOS-Chem v11-01, please see our GEOS-Chem v11-01 benchmark history wiki page.
--Melissa Sulprizio 10:30, 5 May 2015 (EDT)
Unit tests for GEOS-Chem v11-01
We performed a full set of unit tests on GEOS-Chem before submitting each 1-month benchmark. Click on the links below to see the results from each set of unit tests:
| Unit test | Date | Notes |
|---|---|---|
| TBD | TBD |
--Melissa Sulprizio 10:30, 5 May 2015 (EDT)
Previous issues now resolved in GEOS-Chem v11-01
The following bugs and/or technical issues have now been resolved in GEOS-Chem v11-01.
- None yet
Outstanding issues not yet resolved in GEOS-Chem v11-01
The following issues have not yet been resolved in GEOS-Chem v11-01. Some of these issues represent questions of open research rather than bugs in the source code.
- None yet
