Difference between revisions of "Sandbox"

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== feel free to experiment here ==
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=== Species added ===
  
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<!-- ======================================================== -->
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Species added between versions 14.5.0-alpha.5 and 14.5.0-alpha.9:
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<!-- ===== TOP TITLE                                    ===== -->
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<!-- ======================================================== -->
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<table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding=5" align="center">
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<tr bgcolor="#FF0000">
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<th colspan="2" height="80" valign="middle"><p><font color="#FFFFFF" size="+3">GEOS&#150;Chem Wiki</font></p></th>
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</tr>
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−
<tr>
+
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<td>
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<blockquote><p align="justify">The [http://acmg.seas.harvard.edu/geos/ GEOS–Chem model] is a global 3-D model of atmospheric composition driven by assimilated meteorological observations from the Goddard Earth Observing System (GEOS) of the [http://www.as.harvard.edu NASA Global Modeling and Assimilation Office]. It is applied by [http://acmg.seas.harvard.edu/geos/geos_people.html research groups around the world] to a wide range of atmospheric composition problems, Central management and support of the model is provided by the [http://acmg.seas.harvard.edu/index.html Atmospheric Chemistry Modeling Group at Harvard University.]</p></blockquote>
+
  
−
<blockquote><p align="justify">This wiki is meant to facilitate communication between GEOS-Chem users and developers. If this is '''your first time here''', check out [[Features of the GEOS-Chem public wiki|the features page]]. If you would like to contribute to the wiki, please register as a user by clicking ''create account'' at the top right corner of this page.</p></blockquote>
+
{| border=1 cellspacing=0 cellpadding=5
 +
!width='100px' bgcolor='#CCCCCC'|Name
 +
!width='100px' bgcolor='#CCCCCC'|Formula
 +
!width='200px' bgcolor='#CCCCCC'|Fullname
 +
!width='30px' bgcolor='#CCCCCC'|Advected
 +
!width='30px' bgcolor='#CCCCCC'|Dry deposited
 +
!width='30px' bgcolor='#CCCCCC'|Gas
 +
!width='30px' bgcolor='#CCCCCC'|Photolyzed
 +
!width='30px' bgcolor='#CCCCCC'|Wet deposited
  
−
<blockquote><p align="justify">New information is continually being added to the wiki, so please check back here often, or even better, [[Features_of_the_GEOS-Chem_public_wiki#Let_the_GEOS-Chem_wiki_inform_you_of_recent_changes.21|subscribe to the recent changes' RSS feed]]: you will not miss a discussion!</p></blockquote>
+
|-valign='top'
−
</td>
+
|ACO3
−
</tr>
+
|C3H3O3
−
</table>
+
|Peroxyacetyl radical for APAN
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|ACR
 +
|C3H4O
 +
|Acrolein
 +
|X
 +
|X
 +
|X
 +
|X
 +
|
 +
 +
|-valign='top'
 +
|ACRO2
 +
|C3H5O4
 +
|Peroxy radical from ACR
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|ALK7
 +
|C7H16
 +
|Lumped >= C6 Alkanes
 +
|X
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|APAN
 +
|C3H3NO5
 +
|Peroxyacryloyl nitrate
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|APINN
 +
|C10H17NO4
 +
|1st gen organic nitrate from APIN
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|APINO2
 +
|C10H17O3
 +
|Peroxy radical from APIN
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|APINP
 +
|C10H18O3
 +
|Hydroperoxide from APIN
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|AROMCHO
 +
|C5H6O4
 +
|ACCOMECHO from MCM
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|AROMCO3
 +
|C5H5O6
 +
|Lumped aromatic peroxyacetyl radical
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|AROMPN
 +
|C5H5NO8
 +
|Lumped PN from aromatics
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|BPINN
 +
|C10H17NO4
 +
|Saturated 1st gen BPIN organic nitrate
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|BPINO
 +
|C9H14O
 +
|Ketone from BPIN
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|BPINO2
 +
|C10H17O3
 +
|Peroxy radical from BPIN
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|BPINON
 +
|C9H13NO4
 +
|Saturated 2nd gen BPIN organic nitrate
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|BPINOO2
 +
|C10H17O3
 +
|2nd-gen peroxy radical from BPIN
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|BPINOOH
 +
|C9H14O3
 +
|2nd-gen peroxide from BPIN
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|BPINP
 +
|C10H18O3
 +
|Peroxide from BPIN
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|BUTN
 +
|C4H7NO4
 +
|C4H6 alkyl nitrate
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|BUTO2
 +
|C4H7O3
 +
|peroxy radical from C4H6
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|C4H6
 +
|C4H6
 +
|1,3-butadiene
 +
|X
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|C96N
 +
|C9H15NO4
 +
|Saturated 2nd gen monoterpene organic nitrate
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|C96O2
 +
|C10H17O3
 +
|2nd-gen peroxy radical from APIN
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|C96O2H
 +
|C9H16O3
 +
|Peroxide from APIN 2nd gen
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|EBZ
 +
|C8H10
 +
|Ethylbenzene
 +
|X
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|GCO3
 +
|HOCH2CO3
 +
|Peroxyacetyl radical for PHAN
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|HACTA
 +
|HOCH2CO2H
 +
|Hydroxyacetic/glycolic acid
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|LIMAL
 +
|C10H16O2
 +
|Aldehyde from limonene
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|LIMKB
 +
|C10H16O3
 +
|2nd gen ketone from limonene
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|LIMKET
 +
|C10H16O2
 +
|Ketone from limonene
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|LIMKO2
 +
|C10H17O3
 +
|2nd-gen peroxy radical from LIMO
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|LIMN
 +
|C10H17NO4
 +
|Saturated 1st gen limonene organic nitrate
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|LIMNB
 +
|C10H15NO4
 +
|Saturated 1st gen LIMO organic nitrate
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|LIMO2H
 +
|C10H18O3
 +
|Acid from LIMO
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|LIMO3
 +
|C10H17O3
 +
|Acylperoxy radical from LIMO
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|LIMO3H
 +
|C10H18O4
 +
|Peracid from LIMO
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|LIMPAN
 +
|C10H17NO4
 +
|PAN from LIMO
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|MEKCO3
 +
|C3H5O4
 +
|False
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|MEKPN
 +
|C3H5NO6
 +
|MEK peroxyacetyl nitrate
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|MYRCO
 +
|C10H18O3
 +
|Aldehyde or ketone from myrcene
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|PHAN
 +
|C2H3NO6
 +
|Peroxyhydroxyacetic nitric anhydride
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|PIN
 +
|C10H17NO4
 +
|Saturated 1st gen monoterpene organic nitrate
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|PINAL
 +
|C10H16O2
 +
|Pinonaldehyde
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|PINO3
 +
|C10H17O3
 +
|Acylperoxy radical from APIN
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|PINO3H
 +
|C10H18O4
 +
|Pinonic peracid
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|PINONIC
 +
|C10H18O3
 +
|Pinonic acid
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|PINPAN
 +
|C10H17NO4
 +
|PAN from pinonaldehyde
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|R7N1
 +
|C7H15NO5
 +
|Peroxy radical from R7N2
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|R7N2
 +
|RO2NO
 +
|C7 Lumped alkyl nitrate
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|R7O2
 +
|C7H15O2
 +
|Peroxy radical from ALK7
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|R7P
 +
|C7H16O2
 +
|Peroxide from R7O2
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|RNO3
 +
|RO2NO
 +
|Lumped aromatic nitrate
 +
|X
 +
|X
 +
|X
 +
|X
 +
|X
 +
 +
|-valign='top'
 +
|STYR
 +
|C8H8
 +
|Styrene
 +
|X
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|TLFUO2
 +
|C5H7O5
 +
|False
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|TLFUONE
 +
|C5H6O2
 +
|Aromatic furanones
 +
|X
 +
|X
 +
|X
 +
|
 +
|X
 +
 +
|-valign='top'
 +
|TMB
 +
|C8H10
 +
|Trimethylbenzenes
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|-valign='top'
 +
|ZRO2
 +
|C7H9O5
 +
|RO2 for making lumped aromatic nitrate
 +
|
 +
|
 +
|X
 +
|
 +
|
 +
 +
|}
  
−
<!-- ======================================================== -->
+
−
<!-- ===== GENERAL INFO ABOUT GEOS-CHEM                ===== -->
+
=== Species removed===
−
<!-- ======================================================== -->
+
−
<p>&nbsp;</p>
+
−
<table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
+
  
−
<tr bgcolor="#00AAAA">
+
Species removed between versions 14.5.0-alpha.5 and 14.5.0-alpha.9:
−
<th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">General information about GEOS&#150;Chem</font></p></th>
+
−
</tr>
+
  
−
<!-- ======================================================== -->
+
{| border=1 cellspacing=0 cellpadding=5
−
<!-- ===== GENERAL INFO : FIRST ROW                    ===== -->
+
!width='100px' bgcolor='#CCCCCC'|Name
−
<!-- ======================================================== -->
+
!width='100px' bgcolor='#CCCCCC'|Formula
 +
!width='200px' bgcolor='#CCCCCC'|Fullname
 +
!width='30px' bgcolor='#CCCCCC'|Advected
 +
!width='30px' bgcolor='#CCCCCC'|Dry deposited
 +
!width='30px' bgcolor='#CCCCCC'|Gas
 +
!width='30px' bgcolor='#CCCCCC'|Photolyzed
 +
!width='30px' bgcolor='#CCCCCC'|Wet deposited
  
−
<!-- Header title -->
+
|}
−
<tr bgcolor="#cccccc">
+
−
<th width="50%"scope="col"><big>Introduction and overview</big></th>
+
−
<th width="50%"scope="col"><big>Steering Committee And Working Groups</big></th>
+
−
</tr>
+
−
 
+
−
<tr>
+
−
 
+
−
<!-- Introduction & Overview: Links -->
+
−
<td width="50%" valign="top">
+
−
* [[Features of the GEOS-Chem public wiki]]
+
−
* [[GEOS-Chem welcome letter for new users]]
+
−
* [http://acmg.seas.harvard.edu/geos/geos_overview.html GEOS-Chem Overview]
+
−
* [http://acmg.seas.harvard.edu/geos/geos_people.html GEOS-Chem People & Projects]
+
−
* [http://acmg.seas.harvard.edu/geos/word_pdf_docs/resources_guidelines_tips.pdf User Resources, Code Development Guidelines, and Debugging Tips]
+
−
* [[GEOS-Chem programming staff]]
+
−
* [[GEOS-Chem newsletters]]
+
−
</td>
+
−
 
+
−
<!-- Steering Committee and Working Groups: Links -->
+
−
<td width="50%" valign="top">
+
−
* [http://acmg.seas.harvard.edu/geos/geos_steering_cmte.html GEOS-Chem Steering Committee]
+
−
** [[GEOS-Chem model development priorities]]
+
−
* [http://acmg.seas.harvard.edu/geos/geos_working_groups.html GEOS-Chem Working Groups]
+
−
** [[GEOS-Chem Adjoint|Adjoint Model and Data Assimilation Working Group]]
+
−
** [[Aerosols_overview:_projects_and_developments|Aerosols Working Group]]
+
−
** [[Carbon Gases and Organics Working Group]]
+
−
** [[Emissions Working Group]]
+
−
** [[Chemistry Issues|Oxidants and Chemistry Working Group]]
+
−
** [[Regional Air Quality Working Group]]
+
−
</td>
+
−
 
+
−
</tr>
+
−
 
+
−
<!-- ======================================================== -->
+
−
<!-- ===== GENERAL INFO : SECOND ROW                    ===== -->
+
−
<!-- ======================================================== -->
+
−
 
+
−
<!-- Header title -->
+
−
<tr bgcolor="#cccccc">
+
−
<th width="50%"scope="col"><big>Getting Started With GEOS-Chem</big></th>
+
−
<th width="50%"scope="col"><big>General Technical Information</big></th>
+
−
</tr>
+
−
 
+
−
<tr>
+
−
 
+
−
<!-- Getting Started With GEOS-Chem: Links -->
+
−
<td width="50%" valign="top">
+
−
* [[Minimum system requirements for GEOS-Chem]]
+
−
* [[GEOS-Chem supported platforms and compilers]]
+
−
* [[Downloading GEOS-Chem source code and data]]
+
−
* [[GEOS-Chem code development cycle]]
+
−
* [[GEOS-Chem programming resources]] (e.g. tutorials, user guides, etc.)
+
−
* [http://acmg.seas.harvard.edu/geos/doc/man/appendix_7.html GEOS-Chem Programming Style Guide]
+
−
* [[Running GEOS-Chem with TESTRUN]]
+
−
</td>
+
−
 
+
−
<!-- General Technical Information: Links -->
+
−
<td width="50%" valign="top">
+
−
* [[Initial conditions for GEOS-Chem]]
+
−
* [[GEOS-Chem Debugging Tips|Tips on how to debug GEOS-Chem effectively]]
+
−
* [[Reporting GEOS-Chem bugs]]
+
−
* [[Parallelizing GEOS-Chem]] with the OpenMP directives
+
−
* [[Common GEOS-Chem error messages]]
+
−
* [http://acmg.seas.harvard.edu/geos/geos_search.html GEOS-Chem Search Engines]
+
−
</td>
+
−
 
+
−
</tr>
+
−
</table>
+
−
 
+
−
<!-- ======================================================== -->
+
−
<!-- ===== CODE DEVELOPER'S FORUMS: TITLE              ===== -->
+
−
<!-- ======================================================== -->
+
−
<p>&nbsp;</p>
+
−
<table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
+
−
 
+
−
<tr bgcolor="#00AAAA">
+
−
<th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">GEOS&#150;Chem Code Developers' Forums</font></p></th>
+
−
</tr>
+
−
 
+
−
<!-- ======================================================== -->
+
−
<!-- ===== CODE DEVELOPER'S FORUMS : FIRST ROW          ===== -->
+
−
<!-- ======================================================== -->
+
−
<tr bgcolor="#cccccc">
+
−
<th width="50%"scope="col"><big>Coding</big></th>
+
−
<th width="50%"scope="col"><big>Diagnostics</big></th>
+
−
</tr>
+
−
 
+
−
<tr>
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+
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<!-- Coding: Links -->
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<td width="50%" valign="top">
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* [[GEOS-Chem versions under development]]
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* [[Machine issues & portability]]
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* [[Floating point math issues]]
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* [[Bugs and fixes|List of GEOS-Chem bugs and in which version they were resolved]]
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</td>
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<!-- Diagnostics: Links -->
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<td width="50%" valign="top">
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* [http://acmg.seas.harvard.edu/geos/doc/man/appendix_5.html Overview of diagnostics characteristics]
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* [[Mass Flux (ND24/25/26)]]
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* [[Additional diagnostics]]
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</td>
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</tr>
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<!-- ======================================================== -->
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<!-- ===== CODE DEVELOPER'S FORUMS : SECOND ROW        ===== -->
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<!-- ======================================================== -->
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<!-- Header title -->
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<tr bgcolor="#cccccc">
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<th width="50%"scope="col"><big>Emissions</big></th>
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<th width="50%"scope="col"><big>Chemistry</big></th>
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</tr>
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<tr>
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<!-- Emissions: Links -->
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<td width="50%" valign="top">
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* [[Overview]]
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* [[Aircraft emissions]]
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* [[Anthropogenic emissions]]
+
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** [http://acmg.seas.harvard.edu/geos/word_pdf_docs/emissions_v8_02_03.pdf Description of anthropogenic emissions inventories in GEOS-Chem v8-02-03]
+
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** [http://wiki.seas.harvard.edu/geos-chem/images/Anth_emiss_gc_v8-01-04.pdf Description of anthropogenic emissions inventories in GEOS-Chem v8-01-04]
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** [http://acmg.seas.harvard.edu/geos/word_pdf_docs/INVENTORY_GC_public-pre_v8.pdf Table of available anthropogenic emissions inventories for use w/ GEOS-Chem (pre-v8)]
+
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* [[Biofuel emissions]]
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* [[Biogenic emissions]]
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* [[Biomass burning emissions]]
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* [[Lightning NOx emissions]]
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</td>
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+
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<!-- Chemistry Links -->
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<td width="50%" valign="top">
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* [[Chemistry Issues]]
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* [[NOx-Ox-HC-aerosol|NOx-Ox-hydrocarbon-aerosol (aka "full-chemistry") simulation]]
+
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* [[Photolysis mechanism]]
+
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* [[Mercury|Mercury simulation]]
+
−
* [[Tagged CO simulation]]
+
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* [[KPP solvers FAQ]]
+
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* [[Isoprene]]
+
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* [[Linoz stratospheric ozone chemistry]]
+
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</td>
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+
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</tr>
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+
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<!-- ======================================================== -->
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<!-- ===== CODE DEVELOPER'S FORUMS : THIRD ROW          ===== -->
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<!-- ======================================================== -->
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<tr bgcolor="#cccccc">
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<th width="50%"scope="col"><big>Nested Grid Simulations</big></th>
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<th width="50%"scope="col"><big>Earth System Model Framework</big></th>
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</tr>
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<tr>
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+
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<!-- Nested Grid Simulations: Links -->
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<td width="50%" valign="top">
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* [[GEOS-Chem nested grid simulations]]
+
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* [[Available met data for nested grid simulations]]
+
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** [http://acmg.seas.harvard.edu/geos/wiki_docs/nested_grids/geos_data_downloads.pdf Protocol for nested-grid data downloads]
+
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</td>
+
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+
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<!-- Met Fields: Links -->
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<td width="50%" valign="top">
+
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* [[Installing ESMF and other required libraries]]
+
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* [[Code development with the Earth System Model Framework]]
+
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* [[Automatic documentation with protex|Generating automatic LaTeX documentation with protex]]
+
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** [http://frodo.elon.edu/tutorial/tutorial/tutorial.html Web-based LaTeX tutorial]
+
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</td>
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+
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</tr>
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+
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<!-- ======================================================== -->
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<!-- ===== CODE DEVELOPER'S FORUMS : FOURTH ROW        ===== -->
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<!-- ======================================================== -->
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<tr bgcolor="#cccccc">
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<th width="50%"scope="col"><big>Related Projects</big></th>
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<th width="50%"scope="col"><big></big></th>
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<tr>
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<!-- Related Projects: Links -->
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<td width="50%" valign="top">
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* [[GEOS-Chem column code]]
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* [[GEOS-Chem Adjoint]]
+
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* [[GEOS-Chem Near-Real-Time Simulations]]
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</td>
+
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<!-- Diagnostics: Links -->
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<td width="50%" valign="top">
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</table>
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+
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<!-- ======================================================== -->
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<!-- ===== CODE DEVELOPER'S FORUMS: TITLE              ===== -->
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<!-- ======================================================== -->
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<p>&nbsp;</p>
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<table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
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<th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">Reference: Visualization, Analysis, and Wiki</font></p></th>
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</tr>
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<!-- ======================================================== -->
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<!-- ===== VISUALIZATION : FIRST ROW                    ===== -->
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<th width="50%"scope="col"><big>IDL</big></th>
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<th width="50%"scope="col"><big>GAMAP</big></th>
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</tr>
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+
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<tr>
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+
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<!-- IDL: Links -->
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<td width="50%" valign="top">
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* [http://www.ittvis.com/ ITT Visualization (vendor)]
+
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* [http://idlastro.gsfc.nasa.gov/idl_html_help/Structures.html Structures in IDL]
+
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* [http://idlastro.gsfc.nasa.gov/idl_html_help/Pointers.html Pointers in IDL]
+
−
* [http://idlastro.gsfc.nasa.gov/idl_html_help/Overview_of_Mathematics_in_IDL.html Overview of Mathematics in IDL]
+
−
* [http://www.dfanning.com/ Coyote's Guide to IDL Programming (David Fanning's Web Site)] - Lots of tips on how to accomplish programming tasks
+
−
* [http://www.mpimet.mpg.de/en/misc/software/idl IDL Page at Max Planck Institute for Meteorology]
+
−
* [http://www.mpimet.mpg.de/en/misc/software/idl/doc/mgs_script.pdf Martin Schultz's IDL Tutorial (PDF Format)]
+
−
* [http://idlastro.gsfc.nasa.gov/homepage.html IDL Astronomy User's Library]
+
−
* [http://fermi.jhuapl.edu/s1r/idl/idl.html JHU/APL/S1R IDL routines page]
+
−
* [http://cow.physics.wisc.edu/~craigm/idl/idl.html Craig Markwardt's IDL library]
+
−
* [http://cimss.ssec.wisc.edu/~gumley/doc/idltips.pdf The Underground Guide to IDL by Liam Gumley (PDF)]
+
−
* [[Reading binary files in IDL]]
+
−
</td>
+
−
 
+
−
<!-- Diagnostics: Links -->
+
−
<td width="50%" valign="top">
+
−
* [http://acmg.seas.harvard.edu/gamap/ GAMAP web page]
+
−
* [http://acmg.seas.harvard.edu/gamap/doc/ GAMAP on-line users' guide]
+
−
* [[GAMAP bugs and fixes]]
+
−
* [[GAMAP tips and tricks]]
+
−
**[[General GAMAP usage]]
+
−
**[[File I/O with GAMAP]]
+
−
***[http://acmg.seas.harvard.edu/gamap/doc/timeseries_brief_tutorial.pdf Working with timeseries output in GAMAP]
+
−
**[[Color and graphics with GAMAP]]
+
−
*** [http://acmg.seas.harvard.edu/geos/wiki_docs/gamap/gamap_color_table_file.pdf Loading Color Tables in GAMAP v2.12]
+
−
*** [http://acmg.seas.harvard.edu/forum_files/cdh_ColorInIDL.pdf Working with color in IDL by Chris Holmes]
+
−
**[[Regridding with GAMAP]]
+
−
**[[Date and time computations with GAMAP]]
+
−
**[[Text manipulation with GAMAP]]
+
−
</td>
+
−
 
+
−
</tr>
+
−
 
+
−
<!-- ======================================================== -->
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<!-- ===== VISUALIZATION: SECOND ROW                    ===== -->
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<!-- ======================================================== -->
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+
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<!-- Header title -->
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<th width="50%"scope="col"><big>Wiki Documentation</big></th>
+
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<th width="50%"scope="col"><big></big></th>
+
−
</tr>
+
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+
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<tr>
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<!-- Wiki Documentation: Links -->
+
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<td width="50%" valign="top">
+
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* [[Sandbox]]
+
−
* [http://www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
+
−
* [http://meta.wikimedia.org/wiki/Help:Contents MediaWiki User's Guide]
+
−
* [http://meta.wikimedia.org/wiki/Help:Wikitext Examples of Wiki markup text]
+
−
* [http://meta.wikimedia.org/wiki/Help:Reference_card One-page editing reference card]
+
−
* [http://www.mediawiki.org/wiki/Manual:Configuration_settings Configuration Settings list]
+
−
* [http://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
+
−
</td>
+
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+
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</table>
+

Latest revision as of 19:10, 3 October 2024

Species added

Species added between versions 14.5.0-alpha.5 and 14.5.0-alpha.9:

Name Formula Fullname Advected Dry deposited Gas Photolyzed Wet deposited
ACO3 C3H3O3 Peroxyacetyl radical for APAN X
ACR C3H4O Acrolein X X X X
ACRO2 C3H5O4 Peroxy radical from ACR X
ALK7 C7H16 Lumped >= C6 Alkanes X X
APAN C3H3NO5 Peroxyacryloyl nitrate X X X X X
APINN C10H17NO4 1st gen organic nitrate from APIN X X X X X
APINO2 C10H17O3 Peroxy radical from APIN X
APINP C10H18O3 Hydroperoxide from APIN X X X X
AROMCHO C5H6O4 ACCOMECHO from MCM X X X X
AROMCO3 C5H5O6 Lumped aromatic peroxyacetyl radical X
AROMPN C5H5NO8 Lumped PN from aromatics X X X X X
BPINN C10H17NO4 Saturated 1st gen BPIN organic nitrate X X X X X
BPINO C9H14O Ketone from BPIN X X X X
BPINO2 C10H17O3 Peroxy radical from BPIN X
BPINON C9H13NO4 Saturated 2nd gen BPIN organic nitrate X X X X X
BPINOO2 C10H17O3 2nd-gen peroxy radical from BPIN X
BPINOOH C9H14O3 2nd-gen peroxide from BPIN X X X X
BPINP C10H18O3 Peroxide from BPIN X X X X
BUTN C4H7NO4 C4H6 alkyl nitrate X X X X
BUTO2 C4H7O3 peroxy radical from C4H6 X
C4H6 C4H6 1,3-butadiene X X
C96N C9H15NO4 Saturated 2nd gen monoterpene organic nitrate X X X X X
C96O2 C10H17O3 2nd-gen peroxy radical from APIN X
C96O2H C9H16O3 Peroxide from APIN 2nd gen X X X X
EBZ C8H10 Ethylbenzene X X
GCO3 HOCH2CO3 Peroxyacetyl radical for PHAN X
HACTA HOCH2CO2H Hydroxyacetic/glycolic acid X X X X
LIMAL C10H16O2 Aldehyde from limonene X X X X
LIMKB C10H16O3 2nd gen ketone from limonene X X X X
LIMKET C10H16O2 Ketone from limonene X X X X
LIMKO2 C10H17O3 2nd-gen peroxy radical from LIMO X
LIMN C10H17NO4 Saturated 1st gen limonene organic nitrate X X X X X
LIMNB C10H15NO4 Saturated 1st gen LIMO organic nitrate X X X X X
LIMO2H C10H18O3 Acid from LIMO X X X X
LIMO3 C10H17O3 Acylperoxy radical from LIMO X
LIMO3H C10H18O4 Peracid from LIMO X X X X
LIMPAN C10H17NO4 PAN from LIMO X X X X X
MEKCO3 C3H5O4 False X
MEKPN C3H5NO6 MEK peroxyacetyl nitrate X X X X X
MYRCO C10H18O3 Aldehyde or ketone from myrcene X X X X
PHAN C2H3NO6 Peroxyhydroxyacetic nitric anhydride X X X X X
PIN C10H17NO4 Saturated 1st gen monoterpene organic nitrate X X X X X
PINAL C10H16O2 Pinonaldehyde X X X X
PINO3 C10H17O3 Acylperoxy radical from APIN X
PINO3H C10H18O4 Pinonic peracid X X X X
PINONIC C10H18O3 Pinonic acid X X X X
PINPAN C10H17NO4 PAN from pinonaldehyde X X X X X
R7N1 C7H15NO5 Peroxy radical from R7N2 X
R7N2 RO2NO C7 Lumped alkyl nitrate X X X X X
R7O2 C7H15O2 Peroxy radical from ALK7 X
R7P C7H16O2 Peroxide from R7O2 X X X X X
RNO3 RO2NO Lumped aromatic nitrate X X X X X
STYR C8H8 Styrene X X
TLFUO2 C5H7O5 False X
TLFUONE C5H6O2 Aromatic furanones X X X X
TMB C8H10 Trimethylbenzenes X
ZRO2 C7H9O5 RO2 for making lumped aromatic nitrate X


Species removed

Species removed between versions 14.5.0-alpha.5 and 14.5.0-alpha.9:

Name Formula Fullname Advected Dry deposited Gas Photolyzed Wet deposited
Retrieved from "https://wiki.seas.harvard.edu/geos-chem/index.php?title=Sandbox&oldid=54327"