GEOS-Chem 12 benchmark history: Difference between revisions
(→12.2.0) |
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|[[Leaf_area_indices_in_GEOS-Chem#Yuan_processed_MODIS_LAI|Update to Yuan processed MODIS LAI product (covering years 2005-2016)]] | |[[Leaf_area_indices_in_GEOS-Chem#Yuan_processed_MODIS_LAI|Update to Yuan processed MODIS LAI product (covering years 2005-2016)]] | ||
*'''Off while we investigate an issue in the HEMCO interpolation''' | |||
|Jenny Fisher (Wollongong) <br>Barron Henderson (US EPA) | |Jenny Fisher (Wollongong) <br>Barron Henderson (US EPA) | ||
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|Comments on SURFACE differences: | |Comments on SURFACE differences: | ||
| | |Below we summarize the notable changes caused by specific updates. | ||
'''[[ISORROPIA_II#Investigating_persistent_noise_observed_in_ISORROPIA_output|Update ISORROPIA from v2.0 to v2.2]]''' | |||
*This update caused changes in NH3 and NIT at all levels. These differences are small number differences where concentrations are low. | |||
'''[[MEGAN_v2.1_plus_Guenther_2012_biogenic_emissions#Updated_PFT_file|Updated PFT file for MEGAN]]''' | |||
*This update caused changes in the primary and secondary organic species. Percent differences are largest over the oceans, where concentrations are low. | |||
'''[[Volcanic_SO2_emissions#OMI-based_volcanic_emissions|OMI-based Volcanic emissions 1979-2018]]''' | |||
*This update caused large decreases in SO2 over and downwind of volcanic regions. This also impacted SO4, SO4s, NH3, NH4, NIT, NITs, HNO3, several bromine species near those regions. Cui Ge wrote: | |||
::I saw the non-eruptive volcano emission in July of 2016 seems 0 everywhere. If the NASA online data shows this, I think it is OK to be consistent with that.<br><br> | |||
::Thanks for confirming this data includes both explosive and effusive eruptions. By my understanding, because volcano emission has big uncertainty (from literature also from our volcano paper), NASA team did some adjustment (the amount of volcano emission, the duration of each volcano, etc) after we published our paper. I think this updated volcano data would be the best volcano data we have for now, also we may want to keep our data to be consistent with this online source data. The AEROCOM volcano data (used in GEOS-Chem) has much bigger uncertainties. To summarize this, I think the code, the process and the data what you are using is all right. As long as we have consistent volcano data with this online source, it would be great. | |||
The following updates impacted species concentrations slightly, but the changes did not amount to >10%. | |||
*Read in and regrid existing MODIS LAI and OLSON data via HEMCO | |||
*Update from [[HEMCO_versions#HEMCO_development_history|HEMCO version]] 2.1.011 to 2.1.012: [[HEMCO_versions#Bug_fix_for_HEMCO_interpolation_algorithm|Bug fix for HEMCO interpolation algorithm]] | |||
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|In the EMISSION RATIO maps, list all species that changed by 10% or more: | |In the EMISSION RATIO maps, list all species that changed by 10% or more: | ||
|Biogenic emissions: ACET, ALD2, APIN, BCAR, BPIN, CARE, CO, EOH, FARN, ISOP, LIMO, MBOX, MONX, MYRC, OMON, OSQT, PRPE, SABI | | | ||
*Biogenic emissions: ACET, ALD2, APIN, BCAR, BPIN, CARE, CO, EOH, FARN, ISOP, LIMO, MBOX, MONX, MYRC, OMON, OSQT, PRPE, SABI | |||
*SO2 volcano emissions | |||
|-valign="top" | |-valign="top" | ||
|Comments on EMISSION RATIO differences: | |Comments on EMISSION RATIO differences: | ||
| | | | ||
*The differences in biogenic emissions are caused by [[MEGAN_v2.1_plus_Guenther_2012_biogenic_emissions#Updated_PFT_file|updating to a new PDF file created from higher resolution data]]. | |||
|-valign="top" | |-valign="top" |
Revision as of 17:40, 14 March 2019
On this page we have posted complete information about all benchmark simulations (both 1-month and 1-year) for GEOS-Chem 12.
1-year full-chemistry benchmarks
12.0.0-Run0
Three GEOS-Chem model versions were compared to each other:
The output plots for this run may be downloaded from:
ftp ftp.as.harvard.edu cd gcgrid/geos-chem/1yr_benchmarks/GC_12/12.0.0/Run0/output mget *
You may also view the PDF files online by pointing your browser to
http://ftp.as.harvard.edu/gcgrid/geos-chem/1yr_benchmarks/GC_12/12.0.0/Run0/output/
Please also view the following pages comparing this version to past 1-year benchmarks:
--Melissa Sulprizio (talk) 11:44, 10 August 2018 (UTC)
1-year transport tracers benchmarks
12.2.0-TransportTracers
A 1-year Transport Tracers benchmark simulation was performed using GEOS-Chem 12.2.0. The simulation utilized 4° x 5° GEOS-FP met fields for the year 2016, with a 10-year spinup.
For comparison of the Pb-210 and Be-7 budgets to previous versions, please see the following posts on the Rn-Pb-Be simulation wiki page:
You may view the benchmark plots for the simulation by pointing your browser to the following link:
http://ftp.as.harvard.edu/gcgrid/geos-chem/1yr_benchmarks/GC_12/12.2.0/TransportTracers/output/
Benchmark comments:
- **New in 12.2.0** A suite of transport tracers was added to the Rn-Pb-Be simulation to create a new Transport Tracers simulation to facilitate comparisons of transport schemes between GEOS-Chem "Classic" and/or GCHP with the NASA GEOS-DAS system. A new AgeofAir field was also added to State_Met and saved out via the Transport diagnostic collection for diagnosing the age of air.
- The passive species (PassiveTracer) included in this benchmark and past Rn-Pb-Be benchmark simulations is used to test for mass conservation in GEOS-Chem transport. In past GEOS-Chem versions, we found that mass was not conserved when using the non-local PBL mixing scheme (VDIFF). To track the issue, we have been running the 1-year Rn-Pb-Be benchmark with and without non-local PBL mixing. However, a fix for mass conservation when using the NLPBL mixing scheme was added in GEOS-Chem 12.1.0 and the output from the 12.2.0-TransportTracers benchmark confirms that mass is now conserved for both mixing schemes.
PassiveTracer Summary for TURBDAY mixing ---------------------------------------- Max mass = 17.6750032410721 Tg Min mass = 17.6750032410641 Tg Abs diff = 8.0 g Pct diff = 0.0000 % PassiveTracer Summary for NLPBL mixing --------------------------------------- Max mass = 17.6750032384831 Tg Min mass = 17.6750032384776 Tg Abs diff = 5.5 g Pct diff = 0.0000 %
--Melissa Sulprizio (talk) 14:26, 30 January 2019 (UTC)
1-month benchmarks
12.3.0
This section includes the assessment form for the 1-month benchmark simulation of 12.3.0.
Description | |||||||||||||||||||||||
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New features added into GEOS-Chem |
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Version, resolution, met fields used: | GEOS-FP (72L), 4x5, July 2016 | ||||||||||||||||||||||
1-month benchmark finished on: | Thu Mar 14 06:08:16 EDT 2019 | ||||||||||||||||||||||
Performance statistics: |
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Compared to previous benchmark: | 12.2.0 | ||||||||||||||||||||||
This update will impact: (select all that apply with boldface) |
Advection, BL Mixing, Convection, Met Fields, Dry Dep, Wet Dep, Stratosphere, Anthro Emiss, Biogenic Emiss, Biomass Emiss, Photolysis, Chemistry, Other (please specify): Volcano emissions | ||||||||||||||||||||||
Unit test results may be viewed at: | http://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/GC_12/12.3.0/output/GC_12.3.0_Mar14.results.html | ||||||||||||||||||||||
Plots may be viewed at: | http://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/GC_12/12.3.0/output/ | ||||||||||||||||||||||
Metrics | |||||||||||||||||||||||
Global mean OH from log file (% change): | 12.5415048745052 x 105 molec/cm3 (0.13%) | ||||||||||||||||||||||
Methyl chloroform lifetime (% change): | 4.9406 years (-0.21%) | ||||||||||||||||||||||
Methane lifetime (% change): | 8.3253 years (-0.21%) | ||||||||||||||||||||||
At the SURFACE, list all species that changed by 10% or more: | ISOP, HNO3, H2O2, RCHO, MVK, MACR, NPMN, PPN, R4N2, PRPE, N2O5, HNO4, SO2, SO4s, NH3, NH4, NIT, NITs, Br2, Br, BrO, HOBr, HBr, BrNO3, ISOPND, ISOPNB, MOBA, PROPNN, HAC, GLYC, MVKN, MACRN, NO3, MTPA, LIMO, MTPO, ISOG1, ISOG3, ISOA1, ISOA3, SOAP, EOH, MGLY, GLYX, HPALD, DHDN, ETHLN, HCOOH, IEPOXA, IEPOXB, IEPOXD, ISN1, RIPA, RIPB, RIPD, IMAE, SOAME, SOAGX, SOAMG, LVOC, LVOCOA, ISN1OG, ISN1OA, MONITS, MONITU, HONIT, IONITA, MONITA, IPMN, HC187, BrCl, HCl, Cl, ClO, HOCl, ClNO3, ClNO2, ClOO, OClO, Cl2, Cl2O2, BrSALA, BrSALC, HOI, I2, HI, INO, IONO, I2O2, I2O3, I2O4, ISALA, ISALC, OH | ||||||||||||||||||||||
Comments on SURFACE differences: | Below we summarize the notable changes caused by specific updates.
Update ISORROPIA from v2.0 to v2.2
OMI-based Volcanic emissions 1979-2018
The following updates impacted species concentrations slightly, but the changes did not amount to >10%.
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At 500 hPa, list all species that changed by 10% or more: | ISOP, H2O2, MVK, MACR, NPMN, R4N2, N2O5, HNO4, SO2, SO4, SO4s, NH3, NH4, NIT, NITs, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, ISOPND, ISOPNB, MOBA, PROPNN, GLYC, MVKN, MACRN, NO3, MTPA, LIMO, MTPO, EOH, MGLY, GLYX, HPALD, DHDN, ETHLN, HCOOH, IEPOXA, IEPOXB, IEPOXD, ISN1, RIPA, RIPB, RIPD, IMAE, SOAIE, LVOC, ISN1OG, MONITS, MONITU, HONIT, IPMN, HC187, BrCl, HCl, Cl, ClO, HOCl, ClNO3, ClNO2, ClOO, OClO, Cl2, Cl2O2, BrSALA, BrSALC, CH2I2, HOI, I2, ICl, I, IO, HI, OIO, INO, IONO, IONO2, I2O2, I2O3, I2O4, ISALA, ISALC | ||||||||||||||||||||||
Comments on 500 hPa differences: |
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In the ZONAL MEAN differences, list all species that changed by 10% or more: | NO, PAN, ISOP, HNO3, H2O2, MEK, RCHO, MVK, MACR, NPMN, PPN, R4N2, PRPE, N2O5, HNO4, MP, SO2, SO4, SO4s, NH3, NH4, NIT, NITs, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, MPN, ISOPND, ISOPNB, MOBA, PROPNN, HAC, GLYC, MVKN, MACRN, NO2, NO3, HNO2, MTPA, LIMO, MTPO, TSOG3, TSOA2, TSOA3, ISOG1, ISOG3, ISOA1, ISOA3, SOAP, EOH, MGLY, GLYX, HPALD, DHDN, ETHLN, HCOOH, IEPOXA, IEPOXB, IEPOXD, ISN1, RIPA, RIPB, RIPD, IMAE, SOAIE, SOAME, SOAGX, SOAMG, LVOC, LVOCOA, ISN1OG, ISN1OA, MONITS, MONITU, HONIT, IONITA, MONITA, IPMN, HC187, BrCl, HCl, Cl, ClO, HOCl, ClNO3, ClNO2, ClOO, OClO, Cl2, Cl2O2, BrSALA, BrSALC, CH2I2, CH2IBr, HOI, I2, IBr, ICl, I, IO, HI, OIO, INO, IONO, IONO2, I2O2, I2O3, I2O4, ISALA, ISALC, OH, HO2 | ||||||||||||||||||||||
Comments on ZONAL MEAN differences: |
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In the EMISSION RATIO maps, list all species that changed by 10% or more: |
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Comments on EMISSION RATIO differences: |
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Additional or summary comments: | |||||||||||||||||||||||
Approval | |||||||||||||||||||||||
Requires further investigation: | |||||||||||||||||||||||
Approved by: | |||||||||||||||||||||||
Date of approval: |
--Melissa Sulprizio (talk) 15:59, 14 March 2019 (UTC)
12.2.0
This section includes the assessment form for the 1-month benchmark simulation of 12.2.0.
Description | |||||||||||||||||||||||||||||||||
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New features added into GEOS-Chem |
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Version, resolution, met fields used: | GEOS-FP (72L), 4x5, July 2016 | ||||||||||||||||||||||||||||||||
1-month benchmark finished on: | Sat Jan 26 05:39:11 EST 2019 | ||||||||||||||||||||||||||||||||
Performance statistics: |
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Compared to previous benchmark: | 12.1.0 | ||||||||||||||||||||||||||||||||
This update will impact: (select all that apply with boldface) |
Advection, BL Mixing, Convection, Met Fields, Dry Dep, Wet Dep, Stratosphere, Anthro Emiss, Biogenic Emiss, Biomass Emiss, Photolysis, Chemistry, Other (please specify): | ||||||||||||||||||||||||||||||||
Unit test results may be viewed at: | http://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/GC_12/12.2.0/output/GC_12.2.0_Jan25.results.html | ||||||||||||||||||||||||||||||||
Plots may be viewed at: | http://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/GC_12/12.2.0/output/ | ||||||||||||||||||||||||||||||||
Metrics | |||||||||||||||||||||||||||||||||
Global mean OH from log file (% change): | 12.5253573268589 x 105 molec/cm3 (0.016%) | ||||||||||||||||||||||||||||||||
Methyl chloroform lifetime (% change): | 4.9508 years (-0.022%) | ||||||||||||||||||||||||||||||||
Methane lifetime (% change): | 8.3429 years (-0.023%) | ||||||||||||||||||||||||||||||||
At the SURFACE, list all species that changed by 10% or more: | NO, PAN, ALK4, ISOP, HNO3, MEK, RCHO, MVK, MACR, NPMN, PPN, R4N2, PRPE, C3H8, CH2O, N2O5, HNO4, MP, DMS, SO2, SO4, NH3, NH4, NIT, BCPI, OCPI, BCPO, OCPO, BrO, BrNO2, BrNO3, MPN, ISOPND, ISOPNB, MOBA, PROPNN, MVKN, MACRN, MAP, NO2, NO3, HNO2, BENZ, TOLU, XYLE, MTPA, LIMO, MTPO, TSOG1, TSOG3, TSOG0, TSOA1, TSOA2, TSOA3, TSOA0, ISOA1, ISOA2, ISOA3, ASOA1, ASOA3, SOAP, SOAS, HPALD, DHDN, ETHLN, IEPOXA, IEPOXB, IEPOXD, ISN1, RIPA, RIPB, RIPD, IMAE, SOAIE, SOAME, LVOC, ISN1OG, ISN1OA, MONITS, MONITU, HONIT, IONITA, MONITA, INDIOL, IPMN, BrCl, HCl, Cl, ClO, HOCl, ClNO3, ClNO2, ClOO, OClO, Cl2, Cl2O2, BrSALA, BrSALC, HOI, I2, I, IO, HI, OIO, INO, IONO, IONO2, I2O2, I2O3, I2O4, pFe, OH | ||||||||||||||||||||||||||||||||
Comments on SURFACE differences: | All differences can be attributed to updating the US mask file and retiring BRAVO emissions and using CEDS for Mexico instead. These changes impacted species concentrations at the surface over southern Canada and northern Mexico for several species with anthropogenic emissions. These changes propagated downwind and throughout the troposphere. See more details in the comments for emission differences below. | ||||||||||||||||||||||||||||||||
At 500 hPa, list all species that changed by 10% or more: | ISOP, MVK, MACR, NPMN, PRPE, DMS, NH3, NIT, OCPI, OCPO, HBr, ISOPND, ISOPNB, MOBA, MACRN, XYLE, MTPA, LIMO, MTPO, TSOA2, TSOA3, ISOA3, SOAP, HPALD, ETHLN, IEPOXB, ISN1, RIPA, RIPB, RIPD, LVOC, ISN1OG, MONITU, IPMN, ClNO2, OClO, Cl2, Cl2O2, BrSALA, BrSALC, CH2I2, I2O4, pFe | ||||||||||||||||||||||||||||||||
Comments on 500 hPa differences: |
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In the ZONAL MEAN differences, list all species that changed by 10% or more: | NO, PAN, ALK4, ISOP, HNO3, MEK, ALD2, RCHO, MVK, MACR, NPMN, PPN, R4N2, PRPE, C3H8, CH2O, N2O5, HNO4, MP, DMS, SO2, SO4, SO4s, NH3, NH4, NIT, BCPI, OCPI, BCPO, OCPO, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, MPN, ISOPND, ISOPNB, MOBA, PROPNN, MVKN, MACRN, MAP, NO2, NO3, HNO2, BENZ, TOLU, XYLE, MTPA, LIMO, MTPO, TSOG1, TSOG3, TSOG0, TSOA1, TSOA2, TSOA3, TSOA0, ISOA1, ISOA2, ISOA3, ASOA1, ASOA3, SOAP, SOAS, EOH, HPALD, DHDN, ETHLN, IEPOXA, IEPOXB, IEPOXD, ISN1, RIPA, RIPB, RIPD, IMAE, SOAIE, SOAME, LVOC, ISN1OG, ISN1OA, MONITS, MONITU, HONIT, IONITA, MONITA, INDIOL, IPMN, HC187, BrCl, HCl, Cl, ClO, HOCl, ClNO3, ClNO2, ClOO, OClO, Cl2, Cl2O2, BrSALA, BrSALC, CH2I2, HOI, I2, ICl, I, IO, HI, OIO, INO, IONO, IONO2, I2O2, I2O3, I2O4, pFe, OH | ||||||||||||||||||||||||||||||||
Comments on ZONAL MEAN differences: |
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In the EMISSION RATIO maps, list all species that changed by 10% or more: | Anthropogenic emissions: ACET, ALD2, ALK4, BC, BENZ, C3H8, CH2O, CO, EOH, MEK, NH3, NO, OC, PRPE, SO2, SO4, TOLU, XYLE | ||||||||||||||||||||||||||||||||
Comments on EMISSION RATIO differences: | Differences in anthropogenic emissions are observed near the US border in southern Canada and northern Mexico. These differences are caused by:
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Additional or summary comments: |
The wall time, scalability, and memory usage for this benchmark increased from 12.0.0. This is primarily because this benchmark saves out monthly netCDF diagnostics in HISTORY.rc. In addition, there are ongoing issues on the /n/regal/ scratch disk on Harvard's Odyssey cluster which have been found to negatively impact job performance. An 1-month benchmark for 12.2.0 was also done with gfortran 8.2.0 for comparison with the official benchmark using ifort 17.0.4. The change in compiler produces essentially no change in output, except perhaps at the level of numerical noise.
A 1-year Transport Tracers benchmark simulation was also performed for this version. Please see this wiki post for more details. | ||||||||||||||||||||||||||||||||
Approval | |||||||||||||||||||||||||||||||||
Requires further investigation: | No | ||||||||||||||||||||||||||||||||
Approved by: | Daniel Jacob | ||||||||||||||||||||||||||||||||
Date of approval: | 14 Feb 2019 |
--Melissa Sulprizio (talk) 23:30, 28 January 2019 (UTC)
12.1.0
This section includes the assessment form for the 1-month benchmark simulation of 12.1.0.
Description | |||||||||||||||||||||||||||||||||||||||||||||||
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New features added into GEOS-Chem |
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Version, resolution, met fields used: | GEOS-FP (72L), 4x5, July 2016 | ||||||||||||||||||||||||||||||||||||||||||||||
1-month benchmark finished on: | Wed Nov 21 16:48:07 EST 2018 | ||||||||||||||||||||||||||||||||||||||||||||||
Performance statistics: |
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Compared to previous benchmark: | 12.0.0 | ||||||||||||||||||||||||||||||||||||||||||||||
This update will impact: (select all that apply with boldface) |
Advection, BL Mixing, Convection, Met Fields, Dry Dep, Wet Dep, Stratosphere, Anthro Emiss, Biogenic Emiss, Biomass Emiss, Photolysis, Chemistry, Other (please specify): | ||||||||||||||||||||||||||||||||||||||||||||||
Unit test results may be viewed at: | http://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/GC_12/12.1.0/output/GC_12.1.0_Nov21.results.html | ||||||||||||||||||||||||||||||||||||||||||||||
Plots may be viewed at: | http://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/GC_12/12.1.0/output/ | ||||||||||||||||||||||||||||||||||||||||||||||
Metrics | |||||||||||||||||||||||||||||||||||||||||||||||
Global mean OH from log file (% change): | 12.5233901731440 x 105 molec/cm3 (-0.40%) | ||||||||||||||||||||||||||||||||||||||||||||||
Methyl chloroform lifetime (% change): | 4.9519 years (0.73%) | ||||||||||||||||||||||||||||||||||||||||||||||
Methane lifetime (% change): | 8.3448 years (0.75%) | ||||||||||||||||||||||||||||||||||||||||||||||
At the SURFACE, list all species that changed by 10% or more: | NO, O3, PAN, CO, ALK4, ISOP, HNO3, H2O2, ACET, MEK, ALD2, RCHO, MVK, MACR, NPMN, PPN, R4N2, PRPE, C3H8, CH2O, C2H6, N2O5, HNO4, MP, DMS, SO2, SO4, SO4s, MSA, NH3, NH4, NIT, NITs, BCPI, OCPI, BCPO, OCPO, DST1, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, MPN, ISOPND, ISOPNB, MOBA, PROPNN, HAC, GLYC, MVKN, MACRN, MAP, NO2, NO3, HNO2, BENZ, TOLU, XYLE, MTPA, LIMO, MTPO, TSOG1, TSOG2, TSOG3, TSOG0, TSOA1, TSOA2, TSOA3, TSOA0, ISOG1, ISOG3, ISOA1, ISOA2, ISOA3, ASOG1, ASOG2, ASOG3, ASOAN, ASOA1, ASOA2, ASOA3, SOAP, SOAS, EOH, MGLY, GLYX, ACTA, HPALD, DHDN, ETHLN, HCOOH, IEPOXA, IEPOXB, IEPOXD, ISN1, RIPA, RIPB, RIPD, IMAE, SOAIE, SOAME, SOAGX, SOAMG, LVOC, LVOCOA, ISN1OG, ISN1OA, MONITS, MONITU, HONIT, IONITA, MONITA, INDIOL, IPMN, HC187, BrCl, HCl, Cl, ClO, HOCl, ClNO3, ClNO2, ClOO, OClO, Cl2, Cl2O2, BrSALA, BrSALC, CH2I2, CH2ICl, CH2IBr, HOI, I2, IBr, ICl, I, IO, HI, OIO, INO, IONO, IONO2, I2O2, I2O3, I2O4, ISALA, ISALC, AERI, pFe, OH, HO2 | ||||||||||||||||||||||||||||||||||||||||||||||
Comments on SURFACE differences: | Below we summarize the notable changes caused by specific updates.
Anthropogenic PM2.5 dust source (aka AFCID)
Updates and fixes for the CEDS anthropogenic emissions inventory
Allow for SZA to 98 degrees when getting photolysis rates
The following updates impacted species concentrations slightly, but the changes did not amount to >10%. | ||||||||||||||||||||||||||||||||||||||||||||||
At 500 hPa, list all species that changed by 10% or more: | NO, PAN, ALK4, ISOP, MEK, ALD2, RCHO, MVK, MACR, NPMN, PPN, R4N2, PRPE, C3H8, CH2O, N2O5, HNO4, MP, DMS, SO2, SO4s, NH3, NIT, NITs, BCPI, OCPI, BCPO, OCPO, DST1, DST4, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, MPN, ISOPND, ISOPNB, MOBA, PROPNN, HAC, GLYC, MVKN, MACRN, MAP, NO2, NO3, HNO2, BENZ, TOLU, XYLE, MTPA, LIMO, MTPO, TSOG1, TSOG2, TSOG3, TSOG0, TSOA1, TSOA2, TSOA3, TSOA0, ISOG1, ISOG3, ISOA1, ISOA2, ISOA3, ASOG1, ASOG2, ASOG3, ASOAN, ASOA1, ASOA2, ASOA3, SOAP, SOAS, EOH, MGLY, GLYX, ACTA, HPALD, DHDN, ETHLN, HCOOH, IEPOXA, IEPOXB, IEPOXD, ISN1, RIPA, RIPB, RIPD, IMAE, SOAIE, SOAME, SOAGX, SOAMG, LVOC, LVOCOA, ISN1OG, ISN1OA, MONITS, MONITU, HONIT, IONITA, MONITA, INDIOL, IPMN, HC187, BrCl, HCl, Cl, ClO, HOCl, ClNO3, ClNO2, ClOO, OClO, Cl2, Cl2O2, BrSALA, BrSALC, CH2I2, CH2ICl, CH2IBr, I2, IBr, ICl, I, IO, HI, OIO, INO, IONO, IONO2, I2O2, I2O3, I2O4, pFe, OH, HO2 | ||||||||||||||||||||||||||||||||||||||||||||||
Comments on 500 hPa differences: | See comments for surface differences | ||||||||||||||||||||||||||||||||||||||||||||||
In the ZONAL MEAN differences, list all species that changed by 10% or more: | NO, O3, PAN, CO, ALK4, ISOP, HNO3, H2O2, ACET, MEK, ALD2, RCHO, MVK, MACR, NPMN, PPN, R4N2, PRPE, C3H8, CH2O, C2H6, N2O5, HNO4, MP, DMS, SO2, SO4, SO4s, MSA, NH3, NH4, NIT, NITs, BCPI, OCPI, BCPO, OCPO, DST1, DST2, DST3, DST4, SALC, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, CHBr3, MPN, ISOPND, ISOPNB, MOBA, PROPNN, HAC, GLYC, MVKN, MACRN, MAP, NO2, NO3, HNO2, BENZ, TOLU, XYLE, MTPA, LIMO, MTPO, TSOG1, TSOG2, TSOG3, TSOG0, TSOA1, TSOA2, TSOA3, TSOA0, ISOG1, ISOG2, ISOG3, ISOA1, ISOA2, ISOA3, ASOG1, ASOG2, ASOG3, ASOAN, ASOA1, ASOA2, ASOA3, SOAP, SOAS, EOH, MGLY, GLYX, ACTA, HPALD, DHDN, ETHLN, HCOOH, IEPOXA, IEPOXB, IEPOXD, ISN1, RIPA, RIPB, RIPD, IMAE, SOAIE, SOAME, SOAGX, SOAMG, LVOC, LVOCOA, ISN1OG, ISN1OA, MONITS, MONITU, HONIT, IONITA, MONITA, INDIOL, IPMN, HC187, OCS, BrCl, HCl, H2402, Cl, ClO, HOCl, ClNO3, ClNO2, ClOO, OClO, Cl2, Cl2O2, H2O, BrSALA, BrSALC, CH3I, CH2I2, CH2ICl, CH2IBr, HOI, I2, IBr, ICl, I, IO, HI, OIO, INO, IONO, IONO2, I2O2, I2O3, I2O4, ISALA, ISALC, AERI, pFe, OH, HO2 | ||||||||||||||||||||||||||||||||||||||||||||||
Comments on ZONAL MEAN differences: | See comments for surface differences | ||||||||||||||||||||||||||||||||||||||||||||||
In the EMISSION RATIO maps, list all species that changed by 10% or more: |
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Comments on EMISSION RATIO differences: |
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Additional or summary comments: | Important new features in this version that do not impact benchmark output include:
The switch from ifort 11.1.069 to ifort 17.0.4 produces essentially no change in output, except perhaps at the level of numerical noise. The data below were obtained from 1-month benchmark simulations with GEOS-Chem 12.0.0 submitted by Melissa Sulprizio:
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Approval | |||||||||||||||||||||||||||||||||||||||||||||||
Requires further investigation: | No | ||||||||||||||||||||||||||||||||||||||||||||||
Approved by: | Daniel Jacob | ||||||||||||||||||||||||||||||||||||||||||||||
Date of approval: | 23 Nov 2018 |
--Melissa Sulprizio (talk) 22:37, 21 November 2018 (UTC)
12.0.0
This section includes the assessment form for the 1-month benchmark simulation of 12.0.0.
Description | |
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New features added into GEOS-Chem | |
Version, resolution, met fields used: | GEOS-FP (72L), 4x5, July 2016 |
1-month benchmark finished on: | Mon Jul 30 21:05:43 EDT 2018 |
Performance statistics: |
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Compared to previous benchmark: | v11-02-rc |
This update will impact: (select all that apply with boldface) |
Advection, BL Mixing, Convection, Met Fields, Dry Dep, Wet Dep, Stratosphere, Anthro Emiss, Biogenic Emiss, Biomass Emiss, Photolysis, Chemistry, Other (please specify): |
Unit test results may be viewed at: | http://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/GC_12/12.0.0/output/GC_12.0.0.results.html |
Plots may be viewed at: | http://ftp.as.harvard.edu/gcgrid/geos-chem/1mo_benchmarks/GC_12/12.0.0/output/ |
Metrics | |
Global mean OH from log file (% change): | 12.5734575378792 x 105 molec/cm3 (+1.80%) |
Methyl chloroform lifetime (% change): | 4.9162 years (-1.91%) |
Methane lifetime (% change): | 8.2830 years (-1.85%) |
O3 STE flux (% change): | 495.1870 Tg O3/year (-0.18%) |
At the SURFACE, list all species that changed by 10% or more: | NO, O3, PAN, CO, ALK4, ISOP, HNO3, H2O2, ACET, MEK, ALD2, RCHO, MVK, MACR, NPMN, PPN, R4N2, PRPE, C3H8, CH2O, C2H6, N2O5, HNO4, MP, DMS, SO2, SO4, SO4s, NH3, NH4, NIT, NITs, BCPI, BCPO, OCPI, OCPO, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, MPN, ISOPND, ISOPNB, MOBA, PROPNN, HAC, GLYC, MVKN, MACRN, MAP, NO2, NO3, HNO2, BENZ, TOLU, XYLE, MTPA, LIMO, MTPO, TSOG*, TSOA*, ISOG*, ISOA*, ASOG*, ASOA*, SOAP, SOAS, EOH, MGLY, GLYX, ACTA, HPALD, DHDN, ETHLN, HCOOH, IEPOX*, ISN1, RIP*, IMAE, SOAIE, SOAME, SOAGX, SOAMG, LVOC, LVOCOA, ISN1OG, ISN1OA, MONITS, MONITU, HONIT, MONITA, INDIOL, IPMN, HC187, BrCl, HCl, Cl, ClO, HOCl, ClNO3, ClNO2, ClOO, OClO, Cl2, Cl2O2, BrSALA, BrSALC, CH2I2, CH2ICl, CH2IBr, HOI, I2, IBr, ICl, I, IO, HI, OIO, INO, IONO, IONO2, I2O2, I2O3, I2O4, ISALA, ISALC, AERI, pFe, OH, HO2 |
Comments on SURFACE differences: | Below we summarize the notable changes caused by specific updates.
Add entries to HEMCO_Config.rc for SOAP and pFe in CEDS inventory
Bug fix for CH4 boundary conditions
Bug fix for liquid water content in gckpp_HetRates.F90
Fix typo in call to GAMMA_HOBr_AER
Fixes to DICE-Africa emissions
Bug fix in FlexChem: do not zero out ACTA, EOH, HCOOH concentrations
Add GFED4.1 data for 2016 and 2016
The following updates impacted species concentrations slightly, but the changes did not amount to >10%. |
At 500 hPa, list all species that changed by 10% or more: | NO, PAN, CO, ALK4, ISOP, HNO3, ACET, MEK, ALD2, RCHO, MVK, MACR, NPMN, PPN, R4N2, PRPE, C3H8, C2H6, N2O5, HNO4, MP, DMS, SO2, SO4, NH3, NH4, NIT, NITs, BCPI, BCPO, OCPI, OCPO, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, MPN, ISOPND, ISOPNB, MOBA, PROPNN, HAC, GLYC, MVKN, MACRN, MAP, NO2, NO3, HNO2, BENZ, TOLU, XYLE, MTPA, LIMO, MTPO, TSOG*, TSOA*, ISOG*, ISOA*, ASOG*, ASOA*, SOAP, SOAS, EOH, MGLY, GLYX, ACTA, HPALD, DHDN, ETHLN, HCOOH, IEPOX*, ISN1, RIP*, IMAE, SOAIE, SOAME, SOAGX, SOAMG, LVOC, LVOCOA, ISN1OG, ISN1OA, MONITS, MONITU, HONIT, MONITA, INDIOL, IPMN, HC187, BrCl, HCl, Cl, ClO, HOCl, ClNO3, ClNO2, ClOO, OClO, Cl2, Cl2O2, BrSALA, BrSALC, CH2I2, CH2ICl, CH2IBr, HOI, I2, IBr, ICl, I, IO, HI, OIO, INO, IONO, IONO2, I2O2, I2O3, I2O4, pFe, OH |
Comments on 500 hPa differences: | See comments for surface differences |
In the ZONAL MEAN differences, list all species that changed by 10% or more: | NO, PAN, CO, ALK4, ISOP, HNO3, H2O2, ACET, MEK, ALD2, RCHO, MVK, MACR, NPMN, PPN, R4N2, PRPE, C3H8, CH2O, C2H6, N2O5, HNO4, MP, DMS, SO2, SO4, SO4s, NH3, NH4, NIT, NITs, BCPI, BCPO, OCPI, OCPO, Br2, Br, BrO, HOBr, HBr, BrNO2, BrNO3, MPN, ISOPND, ISOPNB, MOBA, PROPNN, HAC, GLYC, MVKN, MACRN, MAP, NO2, NO3, HNO2, BENZ, TOLU, XYLE, MTPA, LIMO, MTPO, TSOG*, TSOA*, ISOG*, ISOA*, ASOG*, ASOA*, SOAP, SOAS, EOH, MGLY, GLYX, ACTA, HPALD, DHDN, ETHLN, HCOOH, IEPOX*, ISN1, RIP*, IMAE, SOAIE, SOAME, SOAGX, SOAMG, LVOC, ISN1OG, ISN1OA, MONITS, MONITU, HONIT, IONITA, MONITA, INDIOL, IPMN, HC187, CH4, BrCl, HCl, Cl, ClO, HOCl, ClNO3, ClNO2, ClOO, OClO, Cl2, Cl2O2, BrSALA, BrSALC, CH2I2, CH2IBr, HOI, I2, ICl, I, IO, HI, OIO, INO, IONO, IONO2, I2O2, I2O3, I2O4, pFe, OH, HO2 |
Comments on ZONAL MEAN differences: | See comments for surface differences |
In the EMISSION RATIO maps, list all species that changed by 10% or more: |
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Comments on EMISSION RATIO differences: |
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Additional or summary comments: | |
Approval | |
Requires further investigation: | No |
Approved by: | GCST |
Date of approval: | 02 Aug 2018 |
--Melissa Sulprizio (talk) 17:10, 31 July 2018 (UTC)
GCHP benchmarks
TBD