GEOS-Chem 13.2.1: Difference between revisions
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'''''[[GEOS-Chem_versions|GEOS-Chem Versions Page]]''''' | '''''[[GEOS-Chem_versions|GEOS-Chem Versions Page]]''''' | ||
This page includes information about GEOS-Chem 13.2.1 | This page includes information about GEOS-Chem 13.2.1. | ||
=== Version overview === | === Version overview === | ||
The following items have been added to GEOS-Chem 13.2.1 since the last benchmark for [[GEOS-Chem 13.2.0]]. See also the [https://github.com/geoschem/geos-chem/milestone/25 13.2.1 milestone | * '''Release date:''' 10 Sep 2021 | ||
* '''DOI for GEOS-Chem Classic 13.2.1:''' [https://doi.org/10.5281/zenodo.5500717 10.5281/zenodo.5500717] | |||
* '''DOI for GCHP 13.2.1:''' [https://doi.org/10.5281/zenodo.5500718 10.5281/zenodo.5500718] | |||
* '''DOI for HEMCO 3.1.1:''' [https://doi.org/10.5281/zenodo.5504133 10.5281/zenodo.5504133] | |||
The following items have been added to GEOS-Chem 13.2.1 since the last benchmark for [[GEOS-Chem 13.2.0]]. See also the following Github pages: | |||
*[https://github.com/geoschem/geos-chem/milestone/25?closed=1 13.2.1 milestone for geoschem/geos-chem] | |||
*[https://github.com/geoschem/GCHP/milestone/8?closed=1 13.2.1 milestone for geoschem/GCHP] | |||
*[https://github.com/geoschem/HEMCO/milestone/3?closed=1 3.1.1 milestone for geoschem/HEMCO] | |||
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!colspan="4" bgcolor="#CCFFFF"|Updates that will affect full-chemistry simulations | !colspan="4" bgcolor="#CCFFFF"|Updates that will affect full-chemistry simulations | ||
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|[https://github.com/geoschem/geos-chem/issues/839 Retire tropchem simulation as an option] | |||
|Melissa Sulprizio (GCST) | |||
|Structural | |||
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*NOTE: Users can still choose between simulations with 72 or 47 vertical levels | |||
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|Diagnostics | |Diagnostics | ||
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*NOTE: This update will cause JvalO3O1D and JvalO3O3P plots to differ w/r/t previous versions, but will not affect benchmark metrics such as mean OH concentration, MCF lifetime, etc. | *NOTE: This update will cause JvalO3O1D and JvalO3O3P plots to differ w/r/t previous versions, but will not affect benchmark metrics such as mean OH concentration, MCF lifetime, etc. | ||
|-valign="top" | |||
|[https://github.com/geoschem/HEMCO/issues/95 Fix to HEMCO lightning flash rate diagnostic units] | |||
|Lee Murray (Rochester) | |||
|HEMCO<br>Diagnostics | |||
| | |||
*See also [https://github.com/geoschem/HEMCO/pull/96 geoschem/HEMCO #96] | |||
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|Planeflight diagnostic bug fixes: | |Planeflight diagnostic bug fixes: | ||
*Fixed incorrect unit conversions in planeflight diagnostic output | *[https://github.com/geoschem/geos-chem/issues/796 Fixed incorrect unit conversions in planeflight diagnostic output] | ||
*Run stops unexpectedly when converting altitude -> pressure | *[https://github.com/geoschem/geos-chem/issues/801 Run stops unexpectedly when converting altitude -> pressure] | ||
|Tess Carter (MIT)<br>Bob Yantosca (GCST) | |Tess Carter (MIT)<br>Bob Yantosca (GCST) | ||
|Diagnostics | |Diagnostics | ||
| | | | ||
|-valign="top" | |-valign="top" | ||
|[https://github.com/geoschem/geos-chem/issues/798 | |[https://github.com/geoschem/geos-chem/issues/798 Fixed typo in gc_grid_mod.F90 that caused a regridding error in nested-grid simulations] | ||
|Lizzie Lundgren (GCST)<br>Bob Yantosca (GCST) | |Lizzie Lundgren (GCST)<br>Bob Yantosca (GCST) | ||
|Grids | |Grids | ||
| | |Also see: | ||
*[https://github.com/geoschem/geos-chem/issues/788 geoschem/geos-chem #788] | |||
* | *[https://github.com/geoschem/geos-chem/issues/786 geoschem/geos-chem #786] | ||
* | |||
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|Nested-grid &<br>Testing | |Nested-grid &<br>Testing | ||
| | | | ||
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|[https://github.com/geoschem/geos-chem/issues/832 Add WashU data server to GCHP data download script] | |||
|Liam Bindle (WashU) | |||
|Data download | |||
| | |||
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*Also enables downloads from <tt>[http://geoschemdata.wustl.edu http://geoschemdata.wustl.edu]</tt> | *Also enables downloads from <tt>[http://geoschemdata.wustl.edu http://geoschemdata.wustl.edu]</tt> | ||
|Bob Yantosca (GCST) | |Bob Yantosca (GCST) | ||
| | |Data download | ||
| | | | ||
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|Diagnostics | |Diagnostics | ||
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|Bug fixes for nested grid simulations: | |Bug fixes for nested-grid simulations: | ||
*[https://github.com/geoschem/geos-chem/issues/837 Bug fix: Compute grid box latitude edges properly for nested-grid simulations] | *[https://github.com/geoschem/geos-chem/issues/837 Bug fix: Compute grid box latitude edges properly for nested-grid simulations] | ||
**This fixes a bug introduced by the GCAP 2.0 met field updates in 13.1.0 | **This fixes a bug introduced by the GCAP 2.0 met field updates in 13.1.0 | ||
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|Nested Grids | |Nested Grids | ||
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|Hg simulation | |Hg simulation | ||
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|Run directory updates for GEOS-Chem in GEOS | |||
|Christoph Keller (GMAO)<br>Lizzie Lundgren (GCST) | |||
|GEOS | |||
| | |||
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|[https://github.com/geoschem/HEMCO/pull/98 Add fixes for generating HEMCO standalone run directories] | |||
|Melissa Sulprizio (GCST) | |||
|HEMCO<br>Bug fix | |||
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|Config files | |Config files | ||
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|[https://github.com/GEOS-ESM/MAPL/pull/1002 Bug fix for better error messages if GCHP throws an error during set up | |[https://github.com/GEOS-ESM/MAPL/pull/1002 Bug fix for better error messages if GCHP throws an error during set up] | ||
|Liam Bindle (WashU) | |Liam Bindle (WashU) | ||
|MAPL | |MAPL | ||
| | |Also see: | ||
*[https://github.com/geoschem/MAPL/pull/13 geoschem/MAPL #13] | |||
* | |||
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|[https://github.com/GEOS-ESM/MAPL/pull/962 NetCDF read errors now print an error message that includes the offending file's path and a description of the error | |[https://github.com/GEOS-ESM/MAPL/pull/962 NetCDF read errors now print an error message that includes the offending file's path and a description of the error] | ||
|Liam Bindle (WashU) | |Liam Bindle (WashU) | ||
|MAPL | |MAPL | ||
| | |Also see: | ||
*See [https://github.com/geoschem/MAPL/pull/14 geoschem/MAPL #14] | *See [https://github.com/geoschem/MAPL/pull/14 geoschem/MAPL #14] | ||
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|Rundir creation | |Rundir creation | ||
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|} | |} |
Latest revision as of 17:12, 13 September 2021
This page includes information about GEOS-Chem 13.2.1.
Version overview
- Release date: 10 Sep 2021
- DOI for GEOS-Chem Classic 13.2.1: 10.5281/zenodo.5500717
- DOI for GCHP 13.2.1: 10.5281/zenodo.5500718
- DOI for HEMCO 3.1.1: 10.5281/zenodo.5504133
The following items have been added to GEOS-Chem 13.2.1 since the last benchmark for GEOS-Chem 13.2.0. See also the following Github pages:
- 13.2.1 milestone for geoschem/geos-chem
- 13.2.1 milestone for geoschem/GCHP
- 3.1.1 milestone for geoschem/HEMCO
Feature | Contributor(s) | Model scope | Notes |
---|---|---|---|
Updates that will affect full-chemistry simulations | |||
Retire tropchem simulation as an option | Melissa Sulprizio (GCST) | Structural |
|
Bug fix: Make sure JvalO3O1D and JValO3O3P diagnostic arrays are zeroed in flexchem_mod.F90 | Haipeng Lin (Harvard) Lizzie Lundgren (GCST)) |
Diagnostics |
|
Fix to HEMCO lightning flash rate diagnostic units | Lee Murray (Rochester) | HEMCO Diagnostics |
|
Updates that will not affect full-chemistry simulations | |||
Planeflight diagnostic bug fixes: | Tess Carter (MIT) Bob Yantosca (GCST) |
Diagnostics | |
Fixed typo in gc_grid_mod.F90 that caused a regridding error in nested-grid simulations | Lizzie Lundgren (GCST) Bob Yantosca (GCST) |
Grids | Also see: |
Enable nested-grid integration testing with the following updates:
Fullchem
CH4 |
Bob Yantosca (GCST) | Nested-grid & Testing |
|
Add WashU data server to GCHP data download script | Liam Bindle (WashU) | Data download | |
Update the download_data.py script to read global settings from a YAML file
|
Bob Yantosca (GCST) | Data download | |
Bug fix: Halt simulation if Restart.frequency does not match Restart.duration in HISTORY.rc (for GEOS-Chem Classic only) | Bethany Sutherland (NCST) Bob Yantosca (GCST) |
Diagnostics | |
Bug fixes for nested-grid simulations:
|
Bob Yantosca (GCST) Eloise Marais (UCL) |
Nested Grids | |
Bug fixes for Hg simulation: | Harriet Gounia (Wollongong) Jenny Fisher (Wollongong) Bob Yantosca (GCST) Colin Thackray (Harvard) |
Hg simulation | |
Run directory updates for GEOS-Chem in GEOS | Christoph Keller (GMAO) Lizzie Lundgren (GCST) |
GEOS | |
Add fixes for generating HEMCO standalone run directories | Melissa Sulprizio (GCST) | HEMCO Bug fix |
|
Updates that will only affect GCHP | |||
Bug fix for vertical scale factors in ExtData.rc | Seb Eastham (MIT) Melissa Sulprizio (GCST) |
Config files | |
Bug fix for better error messages if GCHP throws an error during set up | Liam Bindle (WashU) | MAPL | Also see: |
NetCDF read errors now print an error message that includes the offending file's path and a description of the error | Liam Bindle (WashU) | MAPL | Also see: |
Minor GCHP run directory updates | Lizzie Lundgren (GCST) | Rundir creation |
New data directories
The following data directories have been added or updated in this version. You will have to download the directories relevant to your simulation.
Inventory | Type | What was added? | Directory |
---|---|---|---|
HEMCO/SAMPLE_BCs/v2021-07 | Optional | Sample boundary condition files for testing nested-grid simulations (currently: fullchem, CH4) | HEMCO/SAMPLE_BCs/v2021-07 |