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− | <!-- ======================================================== -->
| + | __NOTOC__ |
− | <!-- ===== TOP TITLE ===== -->
| + | {|border="1" width="925px" bordercolor="#000000" cellspacing="0" cellpadding="5" |
− | <!-- ======================================================== -->
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− | <table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding=5" align="center">
| + | |-valign="middle" height="80" bgcolor="##4494cc;" align="center" |
− | <tr bgcolor="#FF0000">
| + | |<p><font color="#FFFFFF" size="+3">'''GEOS–Chem Wiki'''</font></p> |
− | <th colspan="2" height="80" valign="middle"><p><font color="#FFFFFF" size="+3">GEOS–Chem Wiki</font></p></th>
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− | </tr>
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− | </table>
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− | <blockquote><p align="justify">The [http://acmg.seas.harvard.edu/geos/ GEOS–Chem model] is a global 3-D model of atmospheric composition driven by assimilated meteorological observations from the Goddard Earth Observing System (GEOS) of the [http://www.as.harvard.edu NASA Global Modeling and Assimilation Office]. It is applied by [http://acmg.seas.harvard.edu/geos/geos_people.html research groups around the world] to a wide range of atmospheric composition problems, Central management and support of the model is provided by the [http://acmg.seas.harvard.edu/index.html Atmospheric Chemistry Modeling Group at Harvard University.]</p></blockquote>
| + | |} |
| | | |
− | <blockquote><p align="justify">This wiki is meant to facilitate communication between GEOS-Chem users and developers. If this is '''your first time here''', check out [[Features of the GEOS-Chem public wiki|the features page]]. If you would like to contribute to the wiki, please register as a user by clicking ''create account'' at the top right corner of this page.</p></blockquote>
| + | {|border="0" width="925px" bordercolor="#FFFFFF" cellspacing="0" cellpadding="5" |
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− | <blockquote><p align="justify">New information is continually being added to the wiki, so please check back here often, or even better, [[Features_of_the_GEOS-Chem_public_wiki#Let_the_GEOS-Chem_wiki_inform_you_of_recent_changes.21|subscribe to the recent changes' RSS feed]]: you will not miss a discussion!</p></blockquote>
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− | <!-- ======================================================== -->
| + | ---- |
− | <!-- ===== GENERAL INFO ABOUT GEOS-CHEM ===== -->
| + | |
− | <!-- ======================================================== -->
| + | |
− | <p> </p>
| + | |
− | <table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
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− | <tr bgcolor="#00AAAA"> | + | <p align="center"><big>'''GEOS-Chem Community Mission: to advance understanding of human and natural influences on the environment<br>through a comprehensive, state-of-the-science, readily accessible global model of atmospheric composition.'''</big></p> |
− | <th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">General information about GEOS–Chem</font></p></th> | + | |
− | </tr>
| + | |
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− | <!-- ======================================================== -->
| + | The [http://geos-chem.org GEOS–Chem model] is a global 3-D model of atmospheric composition driven by assimilated meteorological observations from the Goddard Earth Observing System (GEOS) of the [http://gmao.gsfc.nasa.gov/ NASA Global Modeling and Assimilation Office]. It is applied by [https://geoschem.github.io/geos-chem-people-projects-map/ research groups around the world] to a wide range of atmospheric composition problems. Central management and support of the model is provided by the [https://acmg.seas.harvard.edu/ Atmospheric Chemistry Modeling Group at Harvard University] and by the [https://sites.wustl.edu/acag/ Atmospheric Composition Analysis Group at Washington University]. |
− | <!-- ===== GENERAL INFO : FIRST ROW ===== -->
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− | <!-- ======================================================== -->
| + | |
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− | <!-- Header title -->
| + | |} |
− | <tr bgcolor="#cccccc">
| + | |
− | <th width="50%"scope="col"><big>Introduction and overview</big></th>
| + | |
− | <th width="50%"scope="col"><big>Steering Committee And Working Groups</big></th>
| + | |
− | </tr>
| + | |
| | | |
− | <tr>
| + | {|border="1" width="925px" bordercolor="#000000" cellspacing="0" cellpadding="5" |
| | | |
− | <!-- Introduction & Overview: Links -->
| + | |-valign="top" |
− | <td width="50%" valign="top">
| + | |colspan="3" align="center" bgcolor="#CCCCCC"|'''<font size="+2">[[GEOS-Chem overview]]</font>''' |
− | * [[GEOS-Chem welcome letter for new users]]
| + | |-valign="top" |
− | * [[Features of the GEOS-Chem public wiki]]
| + | |width="225px" align="center"|<font size="+2">[[GEOS-Chem versions|Past releases]]</font> |
− | * [http://acmg.seas.harvard.edu/geos/geos_overview.html GEOS-Chem Overview]
| + | |width="450px" align="center" bgcolor="#CCFFFF"|<font size="+2">[[GEOS-Chem 14.4.3|'''Current release: GEOS-Chem 14.4.3''']]</font> |
− | * [http://acmg.seas.harvard.edu/geos/geos_people.html GEOS-Chem People & Projects]
| + | |width="225px" align="center"|<font size="+2">[[GEOS-Chem model development_priorities|Future releases]]</font> |
− | * [http://acmg.seas.harvard.edu/geos/word_pdf_docs/resources_guidelines_tips.pdf User Resources, Code Development Guidelines, and Debugging Tips]
| + | |
− | * [[GEOS-Chem Support Team]]
| + | |
− | * [[GEOS-Chem newsletters]]
| + | |
− | * [http://acmg.seas.harvard.edu/geos/geos_search.html GEOS-Chem Search Engines]
| + | |
− | * [http://acmg.seas.harvard.edu/geos/geos_credit.html Recommendations for offering co-authorships to GEOS-Chem developers]
| + | |
− | * [http://acmg.seas.harvard.edu/geos/geos_dev_history.html GEOS-Chem code development history]
| + | |
| | | |
− | </td>
| + | |} |
| | | |
− | <!-- Steering Committee and Working Groups: Links -->
| + | == News == |
− | <td width="50%" valign="top">
| + | *02 Feb 2024: Read the [https://drive.google.com/file/d/1lUsMZkO0prJGc2eAR1hSxAlYlRooDwK5/view?usp=sharing GEOS-Chem Newsletter 2024, Issue #1] |
− | * [http://acmg.seas.harvard.edu/geos/geos_steering_cmte.html GEOS-Chem Steering Committee] | + | *13 Aug 2024: [[GEOS-Chem 14.4.3]] is now available! |
− | ** [[GEOS-Chem model development priorities]] | + | *03 Jul 2024: We have started migrating older content to the [[GEOS-Chem Wiki archives]]. |
− | * [http://acmg.seas.harvard.edu/geos/geos_working_groups.html GEOS-Chem Working Groups] | + | *A [https://scholar.google.com/citations?user=ho-sNj4AAAAJ GEOS-Chem Google Scholar page] is now available! |
− | ** [[GEOS-Chem Adjoint|Adjoint Model and Data Assimilation Working Group]] | + | **Click 'Follow' to be notified of new publications. |
− | ** [[Aerosols_overview:_projects_and_developments|Aerosols Working Group]] | + | **Contact [mailto:rebekah.horner.20@ucl.ac.uk Bex Horner] with issues or questions. |
− | ** [[Carbon Gases and Organics Working Group]] | + | *The GEOS-Chem Youtube Channel has 350+ subscribers and a new URL: <tt>'''https://www.youtube.com/~geoschem'''</tt> |
− | ** [[Chemistry-Climate Working Group]] | + | *NASA/GMAO is now producing [https://gmao.gsfc.nasa.gov/weather_prediction/GEOS-CF/ GEOS chemical forecasts (GEOS-CF)] using GEOS-Chem coupled to the NASA/GEOS ESM |
− | ** [[Hg and POPs Working Group]]
| + | |
− | ** [[Chemistry Issues|Oxidants and Chemistry Working Group]]
| + | |
− | ** [[Nested Model Working Group]]
| + | |
− | ** [[Sources and Sinks Working Group]]
| + | |
− | </td>
| + | |
| | | |
− | </tr>
| + | For access to all past GEOS-Chem newsletters, visit [[GEOS-Chem newsletters|this page]]. |
| | | |
− | <!-- ======================================================== -->
| + | == Documentation == |
− | <!-- ===== GENERAL INFO : SECOND ROW ===== -->
| + | |
− | <!-- ======================================================== -->
| + | |
| | | |
− | <!-- Header title -->
| + | === Archives === |
− | <tr bgcolor="#cccccc">
| + | |
− | <th width="50%"scope="col"><big>Getting Started With GEOS-Chem</big></th>
| + | |
− | <th width="50%"scope="col"><big>General Technical Information</big></th>
| + | |
− | </tr>
| + | |
| | | |
− | <tr>
| + | In order to prepare for a migration of the wiki platform, we have archived many of the oldest wiki pages to PDF format. Please see our '''[[GEOS-Chem Wiki archives]]''' to view these pages. |
| | | |
− | <!-- Getting Started With GEOS-Chem: Links -->
| + | === GEOS-Chem manuals and guides === |
− | <td width="50%" valign="top">
| + | |
− | * [[Frequently asked questions about GEOS-Chem]]
| + | |
− | * [[Minimum system requirements for GEOS-Chem]]
| + | |
− | * [[GEOS-Chem supported platforms and compilers]]
| + | |
− | * [[Downloading GEOS-Chem source code and data]]
| + | |
− | * [[GEOS-Chem code development cycle]]
| + | |
− | * [[GEOS-Chem programming resources]] (e.g. tutorials, user guides, etc.)
| + | |
− | * [http://acmg.seas.harvard.edu/geos/doc/man/appendix_7.html GEOS-Chem Programming Style Guide]
| + | |
− | * [[Running GEOS-Chem with TESTRUN]]
| + | |
− | </td>
| + | |
| | | |
− | <!-- General Technical Information: Links -->
| + | * [https://geos-chem.readthedocs.io/en/latest/geos-chem-shared-docs/supplemental-guides/related-docs.html User manuals for GEOS-Chem starting in version 13] |
− | <td width="50%" valign="top">
| + | *[https://geoschem.github.io/gcclassic-manpage-archive/ User manuals for GEOS-Chem 12 and prior versions] |
− | * [[Initial conditions for GEOS-Chem]]
| + | *Guide to running [[GEOS-Chem in CESM]] |
− | * [[GEOS-Chem Debugging Tips|Tips on how to debug GEOS-Chem effectively]] | + | *[[Software_maintained_by_GEOS-Chem_community_members|List of software tools maintained by GEOS-Chem users]] |
− | * [[Reporting GEOS-Chem bugs]]
| + | |
− | * [[Parallelizing GEOS-Chem]] with the OpenMP directives | + | |
− | * [[Common GEOS-Chem error messages]] | + | |
− | * [[Adding tracers to GEOS-Chem|Adding advected tracers and chemical species to GEOS-Chem]]
| + | |
− | </td>
| + | |
| | | |
− | </tr>
| + | === General information about GEOS-Chem === |
− | </table>
| + | |
| | | |
− | <!-- ======================================================== -->
| + | The table below lists where you can find general information about GEOS-Chem. |
− | <!-- ===== CODE DEVELOPER'S FORUMS: TITLE ===== -->
| + | |
− | <!-- ======================================================== -->
| + | |
− | <p> </p>
| + | |
− | <table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
| + | |
| | | |
− | <tr bgcolor="#00AAAA">
| + | {| border=1 cellpadding=5 cellspacing=0 |
− | <th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">GEOS–Chem Code Developers' Forums</font></p></th>
| + | |
− | </tr>
| + | |
| | | |
− | <!-- ======================================================== -->
| + | |-valign="top" |
− | <!-- ===== CODE DEVELOPER'S FORUMS : FIRST ROW ===== -->
| + | !width="200px" bgcolor="#CCCCCC"|Item |
− | <!-- ======================================================== -->
| + | !width="360px" bgcolor="#CCCCCC"|Link |
− | <tr bgcolor="#cccccc">
| + | !width="365px" bgcolor="#CCCCCC"|Description |
− | <th width="50%"scope="col"><big>Coding</big></th>
| + | |
− | <th width="50%"scope="col"><big>Diagnostics</big></th>
| + | |
− | </tr>
| + | |
| | | |
− | <tr>
| + | |-valign="top" |
| + | |'''GEOS-Chem website''' |
| + | |[http://www.geos-chem.org geos-chem.org] |
| + | |Website that links to GEOS-Chem information and resources |
| | | |
− | <!-- Coding: Links -->
| + | |-valign="top" |
− | <td width="50%" valign="top">
| + | |'''Welcome Letter''' |
− | * [[GEOS-Chem versions under development]]
| + | |[http://geos-chem.org/welcome.html geos-chem.org/welcome.html] |
− | * [[Bugs and fixes|List of GEOS-Chem bugs and in which version they were resolved]]
| + | |A welcome letter for new users of GEOS-Chem |
− | * [[Currently unresolved issues in GEOS-Chem]]
| + | |
− | * [[Common GEOS-Chem error messages]]
| + | |
− | * [[GEOS-Chem performance]]
| + | |
− | * [[Machine issues & portability]]
| + | |
− | * [[Floating point math issues]]
| + | |
− | * [[Version control with Git]]
| + | |
− | </td>
| + | |
| | | |
− | <!-- Diagnostics: Links -->
| + | |-valign="top" |
− | <td width="50%" valign="top">
| + | |'''GEOS-Chem Overview''' |
− | * [http://acmg.seas.harvard.edu/geos/doc/man/appendix_5.html Overview of diagnostics characteristics]
| + | |[[GEOS-Chem overview]] (wiki page) |
− | * [[Diagnostic time step]]
| + | |A page with linking to many GEOS-Chem topics. |
− | * [[Mass Flux (ND24/25/26)]]
| + | |
− | * [[Additional diagnostics]]
| + | |
− | </td>
| + | |
| | | |
− | </tr>
| + | |-valign="top" |
| + | |'''GEOS-Chem Narrative''' |
| + | |[http://geos-chem.org/narrative.html geos-chem.org/narrative.html] |
| + | |A narrative descrption of GEOS-Chem that you can include in scientific papers (plus instructions for citing GEOS-Chem) |
| | | |
− | <!-- ======================================================== -->
| + | |-valign="top" |
− | <!-- ===== CODE DEVELOPER'S FORUMS : SECOND ROW ===== -->
| + | |'''GEOS-Chem New Developments''' |
− | <!-- ======================================================== -->
| + | |[http://geos-chem.org/new-developments.html geos-chem.org/new-developments.html] |
| + | |A list of significant GEOS-Chem updates and the developers who worked on them |
| | | |
− | <!-- Header title -->
| + | |-valign="top" |
− | <tr bgcolor="#cccccc">
| + | |'''GEOS-Chem Steering Committee (GCSC)''' |
− | <th width="50%"scope="col"><big>Emissions</big></th>
| + | |[http://geos-chem.org/steering-committee.html geos-chem.org/steering-committee.html] |
− | <th width="50%"scope="col"><big>Chemistry</big></th>
| + | |A listing of current GCSC members and minutes from GCSC meetings |
− | </tr>
| + | |
| | | |
− | <tr>
| + | |-valign="top" |
| + | |'''GEOS-Chem Working Groups''' |
| + | |[http://geos-chem.org/working-groups geos-chem.org/working-groups.html] |
| + | |A listing of GEOS-Chem Working Groups and Working Group Co-Chairs |
| | | |
− | <!-- Emissions: Links -->
| + | |-valign="top" |
− | <td width="50%" valign="top">
| + | |'''GEOS-Chem Versions''' |
− | * [[Emissions overview]]
| + | |[[GEOS-Chem versions]] (wiki page) |
− | * [[Aerosol emissions]]
| + | |A listing of GEOS-Chem versions (with links for more information) |
− | * [[Aircraft emissions]]
| + | |
− | * [[Anthropogenic emissions]]
| + | |
− | ** [http://acmg.seas.harvard.edu/geos/word_pdf_docs/emissions_v8_02_03.pdf Anthropogenic emissions in GEOS-Chem v8-02-03]
| + | |
− | ** [http://wiki.seas.harvard.edu/geos-chem/images/Anth_emiss_gc_v8-01-04.pdf Anthropogenic emissions in GEOS-Chem v8-01-04]
| + | |
− | ** [http://acmg.seas.harvard.edu/geos/word_pdf_docs/INVENTORY_GC_public-pre_v8.pdf Anthropogenic emissions prior to v8-01-01]
| + | |
− | ** [[Scale factors for anthropogenic emissions]]
| + | |
− | * [[Biofuel emissions]]
| + | |
− | * [[Biogenic emissions]]
| + | |
− | * [[Biomass burning emissions]]
| + | |
− | * [[Lightning NOx emissions]]
| + | |
− | * [[Ship emissions]]
| + | |
− | * [[Soil NOx emissions]]
| + | |
− | * [[Volcanic SO2 emissions from Aerocom|Volcanic emissions]]
| + | |
− | </td>
| + | |
| | | |
− | <!-- Chemistry Links -->
| + | |-valign="top" |
− | <td width="50%" valign="top">
| + | |'''GEOS-Chem Species List''' |
− | * Standard chemistry mechanisms in GEOS-Chem
| + | |[https://geos-chem.readthedocs.io/en/latest/geos-chem-shared-docs/supplemental-guides/species-guide.html View GEOS-Chem Species properties] (ReadTheDocs page) |
− | ** [[Updating standard chemistry with JPL 10-6]]
| + | |A listing of the species used in the GEOS-Chem chemistry mechanisms |
− | ** [[NOx-Ox-HC-aerosol|NOx-Ox-hydrocarbon-aerosol (aka "full-chemistry") simulation]]
| + | |
− | ** [[KPP solvers FAQ|KPP chemical solver]]
| + | |
− | ** [[Linoz stratospheric ozone chemistry]]
| + | |
− | ** [[Stratospheric chemistry]]
| + | |
− | ** [[Photolysis mechanism|FAST-J photolysis mechanism]]
| + | |
− | * Optional chemistry mechanisms in GEOS-Chem
| + | |
− | ** [[Dicarbonyls simulation]]
| + | |
− | ** [[New isoprene scheme|Caltech isoprene chemistry scheme (v8-03-01+)]]
| + | |
− | ** [[Bromine chemistry mechanism]]
| + | |
− | * [[Offline chemistry simulations]] in GEOS-Chem
| + | |
− | * Other resources
| + | |
− | ** [[Chemistry Issues]]
| + | |
− | ** [[Development of Fast-JX in GEOS-Chem]]
| + | |
− | ** [[DSMACC chemical box model]]
| + | |
− | ** [[Isoprene|List of recent papers about isoprene]]
| + | |
− | ** [[Linking GEOS-Chem to CMAQ]]
| + | |
− | </tr>
| + | |
| | | |
− | <!-- ======================================================== -->
| + | |-valign="top" |
− | <!-- ===== CODE DEVELOPER'S FORUMS : THIRD ROW ===== -->
| + | |'''GEOS-Chem Guides''' |
− | <!-- ======================================================== -->
| + | |[[GEOS-Chem_overview#GEOS-Chem_Guides|GEOS-Chem Guides (wiki page)]] |
| + | |List of several user guides explaining topics in-depth |
| | | |
− | <!-- Header title -->
| + | |-valign="top" |
− | <tr bgcolor="#cccccc">
| + | |'''Requesting Support''' |
− | <th width="50%"scope="col"><big>Dynamics</big></th>
| + | |[https://geos-chem.readthedocs.io/en/latest/help-and-reference/SUPPORT.html GEOS-Chem support guidelines] |
− | <th width="50%"scope="col"><big>Deposition</big></th>
| + | |ReadTheDocs page with instructions for creating GEOS-Chem support requests using the Github issue trackers |
− | </tr>
| + | |
| | | |
− | <tr>
| + | |-valign="top" |
| + | |'''Submitting code or data''' |
| + | |[https://geos-chem.readthedocs.io/en/latest/help-and-reference/CONTRIBUTING.html GEOS-Chem contributing guidelines] |
| + | |ReadTheDocs page with instructions for submitting new source code or data updates to be included into GEOS-Chem. |
| | | |
− | <!-- Dynamics: Links -->
| + | |} |
− | <td width="50%" valign="top">
| + | |
− | * [[Advection scheme TPCORE]]
| + | |
− | * [[Boundary layer mixing]]
| + | |
− | * [[Cloud convection]]
| + | |
− | * [[Dynamic tropopause]]
| + | |
− | </td>
| + | |
− | | + | |
− | <!-- Deposition: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * [[Dry deposition]]
| + | |
− | **[[Leaf area indices in GEOS-Chem]]
| + | |
− | * [[Wet deposition]]
| + | |
− | </td>
| + | |
− | | + | |
− | </tr>
| + | |
− | | + | |
− | <!-- ======================================================== -->
| + | |
− | <!-- ===== CODE DEVELOPER'S FORUMS : FOURTH ROW ===== -->
| + | |
− | <!-- ======================================================== -->
| + | |
− | | + | |
− | <!-- Header title -->
| + | |
− | <tr bgcolor="#cccccc">
| + | |
− | <th width="50%"scope="col"><big>Aerosols</big></th>
| + | |
− | <th width="50%"scope="col"><big>Met Fields</big></th>
| + | |
− | </tr>
| + | |
− | | + | |
− | <tr>
| + | |
− | | + | |
− | <!-- Aerosols: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * [[Aerosols overview: projects and developments|Aerosols working group]]
| + | |
− | * [[Aerosol-only simulation]]
| + | |
− | * [[Aerosol optical properties]]
| + | |
− | * [[Aerosol thermodynamical equilibrium]]
| + | |
− | * [[Carbonaceous aerosols]]
| + | |
− | * [[Mineral dust aerosols]]
| + | |
− | * [[Secondary organic aerosols]]
| + | |
− | * [[Sea salt aerosols]]
| + | |
− | * [[Sulfate aerosols]]
| + | |
− | * Aerosol Microphysics
| + | |
− | ** [[APM aerosol microphysics|APM]]
| + | |
− | ** [[TOMAS aerosol microphysics|TOMAS]]
| + | |
− | </td>
| + | |
− | | + | |
− | <!-- Met Fields: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * [[GCAP]]
| + | |
− | * [[Overview of GMAO met data products]]
| + | |
− | * [[GMAO GEOS-4]]
| + | |
− | * [[GEOS-5|GMAO GEOS-5]]
| + | |
− | ** [[List of GEOS-5 met fields|List of GEOS-5 met fields used by GEOS-Chem]]
| + | |
− | ** [[GEOS-5 issues]]
| + | |
− | ** [[GEOS-5 met field reprocessing]]
| + | |
− | * [[MERRA|GMAO MERRA "reanalysis"]]
| + | |
− | ** [[List of MERRA met fields|List of MERRA met fields used by GEOS-Chem]]
| + | |
− | ** [[MERRA implementation details|Implementing MERRA into GEOS-Chem]]
| + | |
− | * [[GEOS-5.7.2|GMAO GEOS-5.7.2]]
| + | |
− | ** [[List of GEOS-5.7.2 met fields|List of GEOS-5.7.2 met fields proposed for GEOS-Chem]]
| + | |
− | * [http://acmg.seas.harvard.edu/geos/doc/man/appendix_4.html GEOS-Chem Met Fields (from website)]
| + | |
− | ** [[Notes regarding GEOS vertical grids]]
| + | |
− | </td>
| + | |
− | | + | |
− | </tr>
| + | |
− | | + | |
− | <!-- ======================================================== -->
| + | |
− | <!-- ===== CODE DEVELOPER'S FORUMS : FIFTH ROW ===== -->
| + | |
− | <!-- ======================================================== -->
| + | |
− | <tr bgcolor="#cccccc">
| + | |
− | <th width="50%"scope="col"><big>Nested Grid Simulations</big></th>
| + | |
− | <th width="50%"scope="col"><big>Earth System Model Framework</big></th>
| + | |
− | </tr>
| + | |
− | | + | |
− | <tr>
| + | |
− | | + | |
− | <!-- Nested Grid Simulations: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * [[GEOS-Chem nested grid simulations]]
| + | |
− | * [[Setting up GEOS-Chem nested grid simulations]]
| + | |
− | * [[Available met data for nested grid simulations]]
| + | |
− | * [http://acmg.seas.harvard.edu/geos/wiki_docs/nested_grids/geos_data_downloads.pdf Protocol for nested-grid data downloads]
| + | |
− | </td>
| + | |
− | | + | |
− | <!-- Met Fields: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * [[Installing ESMF and other required libraries]]
| + | |
− | * [[Code development with the Earth System Model Framework]]
| + | |
− | * [[Automatic documentation with protex|Generating automatic LaTeX documentation with protex]]
| + | |
− | ** [http://frodo.elon.edu/tutorial/tutorial/tutorial.html Web-based LaTeX tutorial]
| + | |
− | </td>
| + | |
− | | + | |
− | </tr>
| + | |
− | | + | |
− | <!-- ======================================================== -->
| + | |
− | <!-- ===== CODE DEVELOPER'S FORUMS : SIXTH ROW ===== -->
| + | |
− | <!-- ======================================================== -->
| + | |
− | <tr bgcolor="#cccccc">
| + | |
− | <th width="50%"scope="col"><big>Benchmarking and Evaluation</big></th>
| + | |
− | <th width="50%"scope="col"><big>Related Projects</big></th>
| + | |
− | </tr>
| + | |
− | | + | |
− | <tr>
| + | |
− | | + | |
− | <!-- Diagnostics: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * [http://acmg.seas.harvard.edu/geos/geos_benchmark.html General info about GEOS-Chem benchmark simulations]
| + | |
− | * [http://acmg.seas.harvard.edu/geos/geos_1yr_plots.html List of GEOS-Chem 1-year benchmark simulations]
| + | |
− | * [[Mean OH lifetime in GEOS-Chem]]
| + | |
− | * [ftp://ftp.as.harvard.edu/pub/geos-chem/1yr_benchmarks/ FTP site with output from 1-year GEOS-Chem benchmark simulations]
| + | |
− | * [[GEOS-Chem participation in community intercomparisons]]
| + | |
− | * [[Satellite_Spec_Table|Satellite Instrument Specifications Table]]
| + | |
− | </td>
| + | |
− | | + | |
− | <!-- Related Projects: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * [[Grid-independent GEOS-Chem]]
| + | |
− | * [[GEOS-Chem Adjoint]]
| + | |
− | * [[GEOS-Chem Near-Real-Time Simulations]]
| + | |
− | * [[FlexAOD]]
| + | |
− | </td>
| + | |
− | | + | |
− | </tr>
| + | |
− | </table>
| + | |
− | | + | |
− | <!-- ======================================================== -->
| + | |
− | <!-- ===== REFERENCE: TITLE ===== -->
| + | |
− | <!-- ======================================================== -->
| + | |
− | <p> </p>
| + | |
− | <table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
| + | |
− | | + | |
− | <tr bgcolor="#00AAAA">
| + | |
− | <th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">Reference Section</font></p></th>
| + | |
− | </tr>
| + | |
− | | + | |
− | <!-- ======================================================== -->
| + | |
− | <!-- ===== REFERENCE: FIRST ROW ===== -->
| + | |
− | <!-- ======================================================== -->
| + | |
− | <tr bgcolor="#cccccc">
| + | |
− | <th width="50%"scope="col"><big>IDL</big></th>
| + | |
− | <th width="50%"scope="col"><big>GAMAP</big></th>
| + | |
− | </tr>
| + | |
− | | + | |
− | <tr>
| + | |
− | | + | |
− | <!-- IDL: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * [http://www.exelisvis.com/ Exelis Visual Information Solutions (vendor)]
| + | |
− | * [http://www.exelisvis.com/docs/routines-1.html Online IDL Reference Manual @ Exelis website]
| + | |
− | * [http://idlastro.gsfc.nasa.gov/idl_html_help/Structures.html Structures in IDL]
| + | |
− | * [http://idlastro.gsfc.nasa.gov/idl_html_help/Pointers.html Pointers in IDL]
| + | |
− | * [http://idlastro.gsfc.nasa.gov/idl_html_help/Overview_of_Mathematics_in_IDL.html Overview of Mathematics in IDL]
| + | |
− | * [http://www.dfanning.com/ Coyote's Guide to IDL Programming (David Fanning's Web Site)] - Lots of tips on how to accomplish programming tasks
| + | |
− | * [http://www.mpimet.mpg.de/en/misc/software/idl IDL Page at Max Planck Institute for Meteorology]
| + | |
− | * [http://www.mpimet.mpg.de/en/misc/software/idl/doc/mgs_script.pdf Martin Schultz's IDL Tutorial (PDF Format)]
| + | |
− | * [http://idlastro.gsfc.nasa.gov/homepage.html IDL Astronomy User's Library]
| + | |
− | * [http://fermi.jhuapl.edu/s1r/idl/idl.html JHU/APL/S1R IDL routines page]
| + | |
− | * [http://cow.physics.wisc.edu/~craigm/idl/idl.html Craig Markwardt's IDL library]
| + | |
− | * [http://cimss.ssec.wisc.edu/~gumley/doc/idltips.pdf The Underground Guide to IDL by Liam Gumley (PDF)]
| + | |
− | * [[Reading binary files in IDL]]
| + | |
− | </td>
| + | |
− | | + | |
− | <!-- Diagnostics: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * [http://acmg.seas.harvard.edu/gamap/ GAMAP web page]
| + | |
− | * [http://acmg.seas.harvard.edu/gamap/doc/ GAMAP on-line users' guide]
| + | |
− | * [[GAMAP bugs and fixes]]
| + | |
− | * [[GAMAP tips and tricks]]
| + | |
− | **[[General GAMAP usage]]
| + | |
− | **[[TVMAP cheat sheet]]
| + | |
− | **[[File I/O with GAMAP]]
| + | |
− | ***[http://acmg.seas.harvard.edu/gamap/doc/timeseries_brief_tutorial.pdf Working with timeseries output in GAMAP]
| + | |
− | **[[Color and graphics with GAMAP]]
| + | |
− | *** [http://acmg.seas.harvard.edu/geos/wiki_docs/gamap/gamap_color_table_file.pdf Loading Color Tables in GAMAP v2.12]
| + | |
− | *** [http://acmg.seas.harvard.edu/forum_files/cdh_ColorInIDL.pdf Working with color in IDL by Chris Holmes]
| + | |
− | **[[Regridding with GAMAP]]
| + | |
− | **[[Date and time computations with GAMAP]]
| + | |
− | **[[Text manipulation with GAMAP]]
| + | |
− | </td>
| + | |
− | | + | |
− | </tr>
| + | |
− | | + | |
− | <!-- ======================================================== -->
| + | |
− | <!-- ===== REFERENCE: SECOND ROW ===== -->
| + | |
− | <!-- ======================================================== -->
| + | |
− | | + | |
− | <!-- Header title -->
| + | |
− | <tr bgcolor="#cccccc">
| + | |
− | <th width="50%"scope="col"><big>Fortran</big></th>
| + | |
− | <th width="50%"scope="col"><big>Perl</big></th>
| + | |
− | </tr>
| + | |
− | | + | |
− | <tr>
| + | |
− | | + | |
− | <!-- Fortran: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * Intel Fortran Compiler
| + | |
− | ** [http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/main_for_lin_v11.pdf Version 11.1]
| + | |
− | ** [http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/main_for_lin_v12.pdf Version 12.1]
| + | |
− | * [http://www.pgroup.com/products/ PGI Fortran]
| + | |
− | * [http://www-01.ibm.com/software/awdtools/fortran/xlfortran/ IBM XL Fortran]
| + | |
− | * [http://docs.sun.com/app/docs/doc/819-3686 Sun Studio 11 Fortran Compiler]
| + | |
− | * [http://www.liv.ac.uk/HPC/HTMLF90Course/HTMLF90CourseSlides.html Modular Programming w/ Fortran 90 (U. Liverpool)]
| + | |
− | * [http://www.liv.ac.uk/HPC/F90page.html Other University of Liverpool F90 tutorials and courses]
| + | |
− | * [http://sunsite.unc.edu/pub/languages/fortran/index.html User Notes on FORTRAN Programming]
| + | |
− | * [http://www.nsc.liu.se/~boein/f77to90/f77to90.html Fortran 90 for the FORTRAN 77 Programmer]
| + | |
− | * [http://www.kcl.ac.uk/kis/support/cc/fortran/f90home.html#1.0 Fortran 90 Home Page at King's College, London]
| + | |
− | * [http://www.cs.rpi.edu/~szymansk/oof90.html Object Oriented Fortran 90 Programming]
| + | |
− | </td>
| + | |
− | | + | |
− | <!-- Perl: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * [http://www.perl.com Perl.com]
| + | |
− | * [http://www.perl.org/books/beginning-perl/ ''Beginning Perl'' by Simon Cozens (free online book)]
| + | |
− | * [http://backpan.perl.org/authors/id/Q/QU/QUONG/perlin20.html Perl in 20 pages]
| + | |
− | * [http://www.enginsite.com/Library-Robert%27s-Perl-Tutorial.htm MediaWiki User's Guide]
| + | |
− | * [http://www.cpan.org/ Comprehensive Perl Archive Network (CPAN.org)]
| + | |
− | </td>
| + | |
− | | + | |
− | </tr>
| + | |
− | | + | |
− | <!-- Header title -->
| + | |
− | <tr bgcolor="#cccccc">
| + | |
− | <th width="50%"scope="col"><big>R</big></th>
| + | |
− | <th width="50%"scope="col"><big>Wiki Documentation</big></th>
| + | |
− | </tr>
| + | |
− | | + | |
− | <tr>
| + | |
− | | + | |
− | <!-- R: links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | *[http://www.r-project.org/ The R project for statistical computing]
| + | |
− | *[http://journal.r-project.org/ The R journal]
| + | |
− | *[http://www.mayin.org/ajayshah/KB/R/index.html R by example]
| + | |
− | *[[Using R to analyze GEOS-Chem data]]
| + | |
− | </td>
| + | |
− | | + | |
− | <!-- Wiki Documentation: Links -->
| + | |
− | <td width="50%" valign="top">
| + | |
− | * [[Sandbox]]
| + | |
− | * [http://www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
| + | |
− | * [http://meta.wikimedia.org/wiki/Help:Contents MediaWiki User's Guide]
| + | |
− | * [http://meta.wikimedia.org/wiki/Help:Wikitext Examples of Wiki markup text]
| + | |
− | * [http://meta.wikimedia.org/wiki/Help:Reference_card One-page editing reference card]
| + | |
− | * [http://www.mediawiki.org/wiki/Manual:Configuration_settings Configuration Settings list]
| + | |
− | * [http://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
| + | |
− | </td>
| + | |
− | | + | |
− | </tr>
| + | |
− | | + | |
− | </table>
| + | |
In order to prepare for a migration of the wiki platform, we have archived many of the oldest wiki pages to PDF format. Please see our GEOS-Chem Wiki archives to view these pages.
The table below lists where you can find general information about GEOS-Chem.