This page contains information about the Radon-Lead-Beryllium simulation in GEOS-Chem.
- 1 Overview
- 2 Sources
- 3 Sinks
- 4 Validation
- 5 References
- 6 Previous issues that are now resolved
- 7 Outstanding issues
The Rn-Pb-Be simulation in GEOS-Chem was based on that of the old Harvard/GISS CTM model. The current simulation follows Liu et al .
The standard Rn-Pb-Be simulation uses the following tracers:
- Rn222, which is emitted naturally from soils
- Pb210, which is the primary decay product of Rn222
- Be7, which is produced by cosmic rays in the stratosphere and upper atmosphere
This simulation is most frequently used to validate the convection and advection processes in GEOS-Chem.
Note: The current version of the Rn-Pb-Be simulation (v9-01-02) is not compatible with non-local PBL mixing. You must use the TURBDAY PBL mixing scheme. (Helen Amos, 21 Nov 2011 9:02 PM EST)
The source of #Rn222 is determined as follows (cf. Jacob et al ):
- Rn222 emission poleward of 70 degrees = 0.0 [atoms/cm2/s]
- For latitudes 70S-60S and 60N-70N (both land & ocean), Rn222 emission = 0.005 [atoms/cm2/s]
- For latitudes between 60S and 60N:
- Rn222 over land = 1 [atoms/cm2/s] over land
- Rn222 over land = 0.005 [atoms/cm2/s] over oceans
- Where the surface temperature is below 0° C, reduce Rn222 emissions by a factor of 3.
The source of Be7 is taken from Lal and Peters .
Rn222 decays into Pb210 according to the exponential law: EXP( -ΔT * 2.097d-6 )
Pb210 decays according to the exponential law: EXP( -ΔT * 9.725d-10 )
Be7 decays according to the exponential law: EXP( -ΔT * 1.506d-7 )
where -ΔT is the emission timestep in seconds.
See Liu et al .
- Liu, H., D. Jacob, I. Bey, and R.M. Yantosca, Constraints from 210Pb and 7Be on wet deposition and transport in a global three-dimensional chemical tracer model driven by assimilated meteorological fields, J. Geophys. Res, 106, D11, 12,109-12,128, 2001.
- Jacob et al., Evaluation and intercomparison of global atmospheric transport models using Rn-222 and other short-lived tracers, J. Geophys. Res, 102, 5953-5970, 1997.
- Koch, D. J. Geophys. Res, 101, D13, 18651, 1996.
- Lal, D., and B. Peters, Cosmic ray produced radioactivity on the Earth. Handbuch der Physik, 46/2, 551-612, edited by K. Sitte, Springer-Verlag, New York, 1967.
Previous issues that are now resolved
Incorrect Rn values caused by bug in convection_mod.f
--Bob Y. 16:17, 19 May 2011 (EDT)
Bug for ND44 diagnostic in diag3.f
NOTE: This bug was issued as a post-release patch ("v9-01-01-Patch-diags") in GEOS-Chem v9-01-01 and was approved on 07 Jun 2011.
In the ND44 diagnostic section of diag3.f, the following lines are present twice (once for drydep fluxes and again for drydep velocities). This is a special-case for some tracers in the Caltech isoprene scheme:
! Special case for tracers with several dry dep. tracers ! E.g. ISOPN: ISOPND and ISOPNB. ! We handle both tracers at the same time so we need to ! skip the second tracer. (ccc, 2/3/10) !IF ( MMB /= NN ) CYCLE IF ( MMB /= NN .OR. & DEPNAME( N ) == 'ISOPNB' .OR. & DEPNAME( N ) == 'MVKN' ) CYCLE
However, these lines will cause the drydep fluxes and velocities for Be7 to be skipped. The fix is to bracket these lines with an IF statement so that they will only execute for a full-chemistry simulation:
IF ( ITS_A_FULLCHEM_SIM() ) THEN ! Special case for tracers with several dry dep. tracers ! E.g. ISOPN: ISOPND and ISOPNB. ! We handle both tracers at the same time so we need to ! skip the second tracer. (ccc, 2/3/10) !IF ( MMB /= NN ) CYCLE IF ( MMB /= NN .OR. & DEPNAME( N ) == 'ISOPNB' .OR. & DEPNAME( N ) == 'MVKN' ) CYCLE ENDIF
--Bob Y. 11:57, 7 July 2011 (EDT)
Missing drydep diagnostics caused by tracer name error
Please use the following tracer names in input.geos when setting up a Rn-Pb-Be simulation:
%%% TRACER MENU %%% : Type of simulation : 1 Number of Tracers : 3 Tracer Entries -------> : TR# Name g/mole Tracer Members; () = emitted Tracer #1 : 1 Rn 222.0 Tracer #2 : 2 Pb 210.0 Tracer #3 : 3 Be7 7.0
If you use alternate spellings for the Rn and Pb tracers, such as:
Tracer #1 : 1 Rn222 222.0 Tracer #2 : 2 Pb210 210.0
Then this may cause the dry deposition fluxes and frequencies for Pb210 not to be printed out.
A fix is forthcoming in GEOS-Chem v9-01-02.
--Bob Y. 11:57, 7 July 2011 (EDT)
Out-of-bounds errors in ND01, ND02 diagnostics
In RnPbBe_mod.F, the ND01 (Source of Rn, Pb, Be) and ND02 (Decay of Rn, Pb, Be) diagnostics had array-out-of-bounds errors if you requested less than 47 levels.
For example, if you specified these settings in your input.geos file (assuming a GEOS-5 or MERRA simulation w/ 47 levels):
ND01: Rn/Pb/Be source : 47 all ND02: Rn/Pb/Be decay : 47 all
then your run would work just fine. However, if you tried this:
ND01: Rn/Pb/Be source : 1 all ND02: Rn/Pb/Be decay : 1 all
then your run would crash. In some instances, the error masked itself as an I/O error (i.e. "file not found"). This is because an out-of-bounds was probably corrupting the variables that were used to check if all of the data had been read from a particular met field file.
To prevent this from happening, we now test whether the L index is smaller or equal to LD01 (the vertical extent of the AD01 array) or LD02 (the vertical extent of the AD02 array). We have now modified all of the IF statements where the ND01 or ND02 diagnostics are invoked.
For example, we took the existing block of code:
! ND01 diag: 7Be emission [kg/s] IF ( ND01 > 0 ) THEN AD01(I,J,L,3) = AD01(I,J,L,3) + ( ADD_Be / DTSRCE ) ENDIF
and add an additional test on L:
! ND01 diag: 7Be emission [kg/s] IF ( ND01 > 0 .and. L <= LD01 ) THEN AD01(I,J,L,3) = AD01(I,J,L,3) + ( ADD_Be / DTSRCE ) ENDIF
We will add this fix into GEOS-Chem v9-01-02, since it does not affect the full-chemistry simulation.
--Bob Y. 16:50, 8 November 2011 (EST)