Difference between revisions of "Species in GEOS-Chem"
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== Overview == | == Overview == | ||
| − | On this page, we provide a list of species included in [[GEOS-Chem 12#12.8.0|GEOS-Chem 12.8.0]] and earlier versions. It does not include species information for version 13 or beyond. Starting in version 14 ( | + | On this page, we provide a list of species included in [[GEOS-Chem 12#12.8.0|GEOS-Chem 12.8.0]] and earlier versions. It does not include species information for version 13 or beyond. Starting in version 14 (possibly 14.1) we will include species information on ReadTheDocs rather than the GEOS-Chem wiki. |
Please see the following resources for general information about how species are defined in GEOS-Chem: | Please see the following resources for general information about how species are defined in GEOS-Chem: | ||
Revision as of 15:22, 27 July 2022
Previous | Next | Guide to species in GEOS-Chem
- Species in GEOS-Chem
- Henry's law parameters
- Dry deposition parameters
- Wet deposition parameters
- GEOS-Chem species database
- GEOS-Chem species units
- Adding passive species to GEOS-Chem
- Species indexing in GEOS-Chem
Contents
Overview
On this page, we provide a list of species included in GEOS-Chem 12.8.0 and earlier versions. It does not include species information for version 13 or beyond. Starting in version 14 (possibly 14.1) we will include species information on ReadTheDocs rather than the GEOS-Chem wiki.
Please see the following resources for general information about how species are defined in GEOS-Chem:
- Physical properties of GEOS-Chem species
- GEOS-Chem species units
- GEOS-Chem species database
- Adding new species
- Adding passive species to GEOS-Chem
- Species indexing in GEOS-Chem
Legend
The tables in the following sections list the species used in each of the various GEOS-Chem simulations. Several categories—corresponding to fields of the GEOS-Chem species database—are displayed. Note that some categories are only appropriate to full-chemistry simulations.
For the sake of clarity, we have omitted several species properties (i.e. Henry's law constants, dry deposition parameters, rainout & washout parameters, etc.). For a complete list of these properties, please see our Physical properties of GEOS-Chem wiki page.
| Item | Description |
|---|---|
| Species | Abbreviated name of the species. This will be the variable name corresponding to the species in netCDF restart and output files. |
| Full name | A longer, descriptive name for the species. This will be saved to netCDF restart and output files under the long_name variable attribute. |
| Molec wt | Molecular weight of the species in g mol-1.
Some hydrocarbon species are carried in equivalent carbon atoms. For these species, the molecular weight of carbon (12) will be listed along with the number of carbon atoms (1C, 2C, 3C, etc) per species. Species for which no molecular weight is displayed are non-advected species. These have lifetimes so short that they never move away from the grid box in which they are produced. |
| Gas or Aer | Denotes whether the species is in the gas or aerosol phase. This determines how the species dry deposits and/or wet deposits. |
| Advect | Is the species subject to advection, cloud convection, and boundary layer mixing? |
| Drydep | Is the species subject to dry deposition? |
| Wetdep | Is the species soluble and subject to wet deposition? |
| The following quantities are only relevant for full-chemistry simulations: | |
| Formula | Chemical formula of the species. |
| Chem | Is the species contained in one of the pre-built KPP chemistry mechanisms used by GEOS-Chem?
If not, then the species will have its chemistry or loss performed outside of the KPP solver (e.g. in the aerosol modules). |
| Mechanisms | Displays the GEOS-Chem chemistry mechanisms to which the species belongs. |
| Photol | Is the species included in the FAST-JX photolysis mechanism? |
| Structure | A graphic showing the molecular structure of the species. |
| Ox | Shows the number of molecules of the species that will be included in the computation of the P(Ox) and L(Ox) diagnostic families. |
| Version added/updated | The version this species was added to GEOS-Chem or the latest version this species was updated (if available). |
--Bob Yantosca (talk) 19:35, 12 December 2016 (UTC)
Full-chemistry
Search for species alphabetically: (A) (B) (C) (D) (E-F-G) (H) (I) (J-K-L) (M) (N) (O) (P-Q) (R) (S) (T-U-V-W-X-Y-Z)
The following tables lists the species in the full-chemistry simulations. (NOTE: We will add the remaining chemical structure diagrams shortly.)
A
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A3O2 | CH3CH2CH2OO | Primary peroxy radical from C3H8 | 75.1 | Gas | X | - | - | - | - | All | 
|
||
| ACET | CH3C(O)CH3 | Acetone | 58.09 | Gas | X | X | X | - | X | All | 
|
||
| ACTA | CH3C(O)OH | Acetic acid | 60.06 | Gas | X | X | X | X | - | All | 
|
v11-02c | |
| AERI | I | Iodine on aerosol | 126.9 | Aer | X | X | X | X | - | Halogens | v11-02d | ||
| ALD2 | CH3CHO | Acetaldehyde | 44.06 (12, 2C) |
Gas | X | X | X | X | X | All | 
|
||
| ALK4 | - | Lumped >= C4 Alkanes | 58.12 (12, 4C) |
Gas | X | X | - | - | - | All | 
|
||
| ASOA1 ASOA2 ASOA3 ASOAN |
- | Lumped non-volatile aerosol products of light aromatics + IVOCs | 150.0 | Aer | - | X | X | X | - | Complex SOA | v9-02o | ||
| ASOG1 ASOG2 ASOG3 |
- | Lumped non-volatile gas products of light aromatics + IVOCs | 150.0 | Gas | - | X | X | X | - | Complex SOA | v9-02o | ||
| ATO2 | CH3C(O)CH2O2 | Peroxy radical from acetone | 89.08 | Gas | X | - | - | - | - | All | 
|
||
| ATOOH | CH3C(O)CH2OOH | ATO2 peroxide | 90.09 | Gas | - | X | X | X | X | All | 
|
v9-02g |
B
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| B3O2 | CH3CH(OO)CH3 | B3O2 | 75.1 | Gas | X | - | - | - | - | All | 
|
||
| BCPI | C | Hydrophilic black carbon aerosol | 12.01 (12, 1C) |
Aer | - | X | X | X | - | All | |||
| BCPO | C | Hydrophobic black carbon aerosol | 12.01 (12, 1C) |
Aer | - | X | X | X | - | All | |||
| BENZ | C6H6 | Benzene | 78.12 (12, 6C) |
Gas | X | X | - | - | - | All | 
|
v11-02a | |
| Br | Br | Atomic bromine | 79.9 | Gas | X | X | - | - | - | All | v9-01-03m | ||
| Br2 | Br2 | Molecular Bromine | 159.8 | Gas | X | X | X | X | X | All | v9-01-03m | ||
| BrCl | BrCl | Bromine chloride | 115.45 | Gas | X | X | - | - | X | Standard | v10-01c | ||
| BrNO2 | BrNO2 | Nitryl bromide | 125.91 | Gas | X | X | - | - | X | All | 1 | v9-01-03m | |
| BrNO3 | BrNO3 | Bromine nitrate | 141.91 | Gas | X | X | X | - | X | All | 2 | v9-01-03m | |
| BrO | BrO | Bromine monoxide | 95.9 | Gas | X | X | - | - | X | All | 1 | v9-01-03m | |
| BRO2 | C6H7O5 | Peroxy radical from BENZ oxidation | 159.13 | Gas | X | - | - | - | - | All | v11-02a | ||
| BrSALA | Br | Fine sea salt bromine | 79.9 | Aer | X | X | X | X | - | Halogens | v11-02d | ||
| BrSALC | Br | Coarse sea salt bromine | 79.9 | Aer | X | X | X | X | - | Halogens | v11-02d |
C
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C2H4 | C2H4 | Ethylene | 28.05 | Gas | X | - | - | - | - | All | |||
| C2H6 | C2H6 | Ethane | 30.08 | Gas | X | X | - | - | - | - | - | - | - |
| C3H8 | C3H8 | Propane | 44.11 (12, 3C) |
Gas | X | X | - | - | - | All | |||
| C4HVP1 C4HVP2 |
C4H7O3 | C4 hydroxy-vinyl peroxy radicals from HPALDS | 103.11 | Gas | X | - | - | - | - | Standard | - | - | 12.8.0 |
| CCl4 | CCl4 | Carbon tetrachloride | 153.82 | Gas | X | X | - | - | X | Standard | v10-01c | ||
| CFC11 | CCl3F | CFC-11 (R-11, Freon 11) | 137.37 | Gas | X | - | - | X | Standard | 
|
v10-01c | ||
| CFC113 | C2Cl3F3 | CFC-113 (R-113, Freon 113) | 187.0 | Gas | X | X | X | Standard | 
|
v10-01c | |||
| CFC114 | C2Cl2F4 | CFC-114 (R-114, Freon 114) | 170.92 | Gas | X | X | - | - | X | Standard | 
|
v10-01c | |
| CFC115 | C2ClF5 | CFC-115 (R-115, Freon 115) | 154.47 | Gas | X | X | - | - | X | Standard | 
|
v10-01c | |
| CFC12 | CCl2F2 | CFC-12 (R-12, Freon 12) | 120.91 | Gas | - | X | - | - | X | Standard | 
|
v10-01c | |
| CH2Br2 | CH2Br2 | Dibromomethane | 173.83 | Gas | X | X | - | - | X | All | v9-01-03m | ||
| CH2Cl2 | CH2Cl2 | Dichloromethane | 84.93 | Gas | X | X | - | - | X | Halogens | v11-02d | ||
| CH2I2 | CH2I2 | Diiodomethane | 267.84 | Gas | X | X | - | - | X | Halogens | v11-02d | ||
| CH2IBr | CH2IBr | Bromoiodomethane | 220.84 | Gas | X | X | - | - | X | Halogens | v11-02d | ||
| CH2ICl | CH2ICl | Chloroiodomethane | 176.38 | Gas | X | X | - | - | X | Halogens | v11-02d | ||
| CH2O | CH2O, HCHO | Formaldehyde | 30.03 | Gas | X | X | X | X | X | All | |||
| CH2OO | CH2OO | Criegee intermediate | 46.03 | Gas | X | - | - | - | - | All | v11-01d | ||
| CH3Br | CH3Br | Methyl bromide, Bromomethane | 94.94 | Gas | X | X | - | - | X | All | v9-01-03m | ||
| CH3CCl3 | CH3CCl3 | Methyl chloroform | 133.35 | Gas | X | X | - | - | X | Standard | v10-01c | ||
| CH3CHOO | CH3CHOO | Criegee intermediate | 60.06 | Gas | X | - | - | - | - | All | v11-01d | ||
| CH3Cl | CH3Cl | Chloromethane | 50.45 | Gas | X | X | - | - | X | Standard | v10-01c | ||
| CH3I CH3ITracer |
CH3I | Methyl iodide | 141.94 | Gas | X | X | - | - | X | Halogens | v11-02d | ||
| CH4 | CH4 | Methane | 16.05 | Gas | X | X | - | - | - | Standard | v10-01c | ||
| CHBr3 | CHBr3 | Bromoform | 252.73 | Gas | X | X | - | - | X | All | v9-01-03m | ||
| CHCl3 | CHCl3 | Chloroform | 119.35 | Gas | - | X | - | - | X | Halogens | v11-02d | ||
| Cl | Cl | Atomic chlorine | 35.45 | Gas | X | X | - | - | - | Standard | v10-01c | ||
| Cl2 | Cl2 | Molecular chlorine | 70.9 | Gas | - | X | - | - | X | Standard | v10-01c | ||
| Cl2O2 | Cl2O2 | Dichlorine dioxide | 102.91 | Gas | - | X | - | - | X | Standard | 2 | v10-01c | |
| ClNO2 | ClNO2 | Nitryl chloride | 81.45 | Gas | X | X | - | - | X | Standard | 1 | v10-01c | |
| ClNO3 | ClNO3 | Chlorine nitrate | 97.45 | Gas | - | X | X | - | X | Standard | 2 | v10-01c | |
| ClO | ClO | Chlorine monoxide | 51.45 | Gas | X | X | - | - | X | Standard | 1 | v10-01c | |
| ClOO | ClOO | Chlorine dioxide | 67.45 | Gas | X | X | - | - | X | Standard | v10-01c | ||
| CO2 | CO2 | Carbon dioxide | 44.01 | Gas | - | - | - | - | - | All | |||
| CO | CO | Carbon monoxide | 28.01 | Gas | X | X | - | - | - | All |
D
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DHDC | C5H8O6 | Dihydroperoxide dicarbonyl | 164.0 | Gas | X | All | v11-02c | ||||||
| DHDN | C5H10O8N2 | C5 dihydroxydinitrate | 226.0 | Gas | X | X | X | X | X | All | v11-02c | ||
| DHPCARP | C5H9O7 | Dihydroxy α-formyl peroxy radical | 181.0 | Gas | X | All | v11-02c | ||||||
| DHMOB | HOCH2C(CH3)(OH)C(=O)CHO | See Paulot et al., ACP (2009) | Gas | X | All | v9-02g | |||||||
| DIBOO | Dibble peroxy radical | Gas | X | All | v9-02g | ||||||||
| DMS | (CH3)2S | Dimethyl sulfide | 62.13 | Aer | X | X | - | - | - | All | - | - | - |
| DST1 | - | Dust aerosol, Reff = 0.7 microns | 29.0 | Aer | - | X | X | X | - | All | |||
| DST2 | - | Dust aerosol, Reff = 1.4 microns | 29.0 | Aer | - | X | X | X | - | All | |||
| DST3 | - | Dust aerosol, Reff = 2.4 microns | 29.0 | Aer | - | X | X | X | - | All | |||
| DST4 | - | Dust aerosol, Reff = 4.5 microns | 29.0 | Aer | - | X | X | X | - | All | |||
| DSTAL1 | - | Dust alkalinity, Reff = 0.7 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | - |
| DSTAL2 | - | Dust alkalinity, Reff = 1.4 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | - |
| DSTAL3 | - | Dust alkalinity, Reff = 2.4 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | - |
| DSTAL4 | - | Dust alkalinity, Reff = 4.5 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | -
|
E-F-G
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EOH | C2H5OH | Ethanol | 46.08 (12, 2C) |
Gas | X | X | X | X | - | All | v11-02a | ||
| ETHLN | CHOCH2ONO2 | Ethanol nitrate | 105.06 | Gas | X | X | X | X | X | All | 1 | v11-02c | |
| ETNO3 | C2H5ONO2 | Ethyl nitrate | 91.08 | Gas | - | X | X | - | X | Standard | - | - | - |
| ETO2 | CH3CH2OO | ETO2 | 61.07 | Gas | X | - | - | - | - | All | |||
| ETP | CH3CH2OOH | Ethylhydroperoxide | 62.08 | Gas | X | X | X | X | X | All | |||
| GAOO | Criegee intermediate | Gas | X | All | v11-01d | ||||||||
| GLYC | HOCH2CHO | Glycoaldehyde | 60.06 | Gas | - | X | X | X | X | All | |||
| GLYX | CHOCHO | Glyoxal | 58.04 | Gas | - | X | X | X | X | All | v11-02c |
H
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| H | H | Atomic hydrogen | 1.01 | Gas | X | - | - | - | - | Standard | - | - | v10-01c |
| H1211 | CBrClF2 | Halon 1211, Freon 12B1 | 165.36 | Gas | X | X | - | - | X | Standard | 
|
- | v10-01c |
| H1301 | CBrF3 | Halon 1301, Freon 13B1 | 148.91 | Gas | X | X | - | - | X | Standard | 
|
- | v10-01c |
| H2 | H2 | Molecular hydrogen | 2.02 | Gas | X | - | - | - | - | All | - | - | - |
| H2402 | C2Br2F4 | Halon 2402 | 259.82 | Gas | X | X | - | - | X | Standard |
|
- | v10-01c |
| H2O | H2O | Water vapor | 18.02 | Gas | X | - | - | - | - | Standard | - | - | v10-01c |
| H2O2 | H2O2 | Hydrogen peroxide | 34.02 | Gas | X | X | X | X | X | All | - | - | - |
| HAC | HOCH2C(O)CH3 | Hydroxyacetone | 74.08 | Gas | X | X | X | X | X | All | - | - | - |
| HBr | HBr | Hypobromic acid | 80.91 | Gas | X | X | X | X | - | All | - | - | v9-01-03m |
| HC5A | C5H8O2 | isoprene-4,1-hydroxyaldehyde | 100.13 | Gas | - | X | X | X | X | Standard | - | - | 12.8.0 |
| HC187 | Epoxide oxidation product m/z 187-189 | 187.0 | Gas | X | X | X | - | - | All | - | - | v11-02c | |
| HCFC123 | C2HCl2F3 | HCFC-123, Freon 123 | 152.93 | Gas | X | X | - | - | X | Standard | 
|
- | v10-01c |
| HCFC141b | C(CH3)Cl2F | HCFC-141b, Freon 141b | 116.94 | Gas | X | X | - | - | X | Standard | 
|
- | v10-01c |
| HCFC142b | C(CH3)ClF2 | HCFC-142b, Freon 142b | 100.5 | Gas | X | X | - | - | X | Standard | 
|
- | v10-01c |
| HCFC22 | CHClF2 | HCFC-22, Freon 22 | 86.47 | Gas | X | X | - | - | X | Standard | 
|
- | v10-01c |
| HCl | HCl | Hydrochloric acid | 36.45 | Gas | X | X | X | X | - | Standard | - | - | v10-01c |
| HCOOH | HCOOH | Formic acid | 46.03 | Gas | X | X | X | X | - | All | - | - | v11-02c |
| HC5 | HOCH2CH=C(CH3)CHO | Hydroxycarbonyl with 5C | - | Gas | X | - | - | - | - | All | - | - | v9-02g |
| HC5OO | - | Peroxy radical from HC5 | - | Gas | X | - | - | - | - | All | - | - | v9-02g |
| HI | HI | Hydrogen iodide | 127.91 | Gas | H | X | X | X | - | Halogens | - | - | v11-02d
|
| HMHP | HOCH2OOH | Hydroxymethyl hydroperoxide | 64.05 | Gas | X | X | X | X | X | Standard | - | - | 12.8.0 |
| HMML | C4H6O3 | hydroxymethyl-methyl-a-lactone | 102.1 | Gas | X | X | X | X | - | Standard | - | - | 12.8.0 |
| HNO2 | HNO2 | Nitrous acid | 47.01 | Gas | X | X | - | - | X | Standard | - | - | - |
| HNO3 | HNO3 | Nitric acid | 63.01 | Gas | - | X | X | X | X | All | - | 1 | - |
| HNO4 | HNO4 | Peroxynitric acid | 79.01 | Gas | X | X | - | - | X | All | 
|
1 | |
| HO2 | HO2 | Hydroperoxyl radical | 33.01 | Gas | X | - | - | - | - | All | - | - | - |
| HOBr | HOBr | Hypobromous acid | 96.91 | Gas | X | X | X | X | X | All | - | 1 | v9-01-03m |
| HOCl | HOCl | Hypochlorous acid | 52.45 | Gas | X | X | X | X | X | Standard | 1 | v10-01c | |
| HOI | HOI | Hypoiodous acid | 143.89 | Gas | X | X | X | X | X | Halogens | - | - | v11-02d |
| HONIT | - | 2nd gen monoterpene organic nitrate | 215.0 | Gas | X | X | X | X | X | All | - | - | v11-02c |
| HPALD | C5H8O3 | Hydroperoxyaldehydes | 116.0 | Gas | X | X | X | X | X | All | - | - | v11-02c |
| HPALD1 | C5H8O3 | d-4,1-C5-hydroperoxyaldehyde | 116.13 | Gas | X | X | X | - | X | Standard | - | - | 12.8.0 |
| HPALD1OO | C5H7O5 | HPALD1OO | 147.12 | Gas | X | - | - | - | - | Standard | - | - | 12.8.0 |
| HPALD2 | C5H8O3 | d-1,4-C5-hydroperoxyaldehyde | 116.13 | Gas | X | X | X | - | X | Standard | - | - | 12.8.0 |
| HPALD2OO | C5H7O5 | HPALD2OO | 147.12 | Gas | X | - | - | - | - | Standard | - | - | 12.8.0 |
| HPALD3 | C5H8O3 | b-2,1-C5-hydroperoxyaldehyde | 116.13 | Gas | - | X | X | - | X | Standard | - | - | 12.8.0 |
| HPALD4 | C5H8O3 | b-3,4-C5-hydroperoxyaldehyde | 116.13 | Gas | - | X | X | - | X | Standard | - | - | 12.8.0 |
| HPC52O2 | OOCC(C(C=O)O)(O[O])C | HPC52O2 | 165.0 | Gas | X | - | - | - | - | All | - | - | v11-02c |
| HPETHNL | HOOCH2CHO | Hydroperoxy ethanal | 76.06 | Gas | - | X | X | X | X | Standard | - | - | 12.8.0 |
NOTE: HNO3 dry-deposits like a gas, but wet-deposits like an aerosol. Therefore, in the GEOS-Chem species database, we give HNO3 both gas and aerosol parameters.
I
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| I | I | Atomic iodine | 126.9 | Gas | X | X | - | - | - | Halogens | - | - | v11-02d |
| I2 | I2 | Molecular iodine | 253.8 | Gas | X | X | X | X | X | Halogens | v11-02d | ||
| I2O2 | I2O2 | Diiodine dioxide | 285.8 | Gas | - | X | X | X | X | Halogens | - | - | v11-02d |
| I2O3 | I2O3 | Diiodine trioxide | 301.8 | Gas | X | X | X | X | X | Halogens | - | - | v11-02d |
| I2O4 | I2O4 | Diiodine tetraoxide | 317.8 | Gas | X | X | X | X | X | Halogens | - | - | v11-02d |
| IAP | HOCH2C(CH3)(OOH)CH(OH)CHO | Peroxide from IAO2 | Gas | X | X | All | |||||||
| IBr | IBr | Iodine monobromide | 206.9 | Gas | X | X | X | X | X | Halogens | - | - | v11-02d |
| ICHE | C5H8O3 | Isoprene hydroxy-carbonyl-epoxides | 116.13 | Gas | X | X | X | X | - | ? | - | - | - |
| ICHOO | C5H9O5 | Peroxy radical from IEPOXD | 149.14 | Gas | X | - | - | - | - | ? | - | - | - |
| ICl | ICl | Iodine monochloride | 162.45 | Gas | X | X | X | X | X | Halogens | - | - | v11-02d |
| ICN | C5H7NO4 | Lumped isoprene carbonyl-nitrates | 145.13 | Gas | X | X | X | X | X | ? | - | - | - |
| ICNOO | C5H8NO7 | Peroxy radicals from ICN | 194.14 | Gas | X | - | - | - | - | ? | - | - | - |
| ICPDH | C5H10O5 | Isoprene dihydroxy hydroperoxycarbonyl | 150.15 | Gas | X | X | X | X | X | ? | - | - | - |
| IDC | C5H6O2 | Lumped isoprene dicarbonyls | 98.11 | Gas | X | X | X | - | - | ? | - | - | - |
| IDCHP | C5H8O5 | Isoprene dicarbonyl hydroxy dihydroperoxide | 148.13 | Gas | X | X | X | X | X | ? | - | - | - |
| IDHDP | C5H12O6 | Isoprene dihydroxy dihydroperoxide | 168.17 | Gas | X | X | X | X | X | ? | - | - | - |
| IDHNBOO | C5H10NO7 | Peroxy radicals from INPB | 196.16 | Gas | X | - | - | - | - | ? | - | - | - |
| IDHNDOO1 IDHNDOO2 |
C5H10NO7 | Peroxy radicals from INPD | 196.16 | Gas | X | - | - | - | - | ? | - | - | - |
| IDHPE | C5H10O5 | Isoprene dihydroxy hydroperoxy epoxide | 150.15 | Gas | X | X | X | X | X | ? | - | - | - |
| IDN | C5H8N2O6 | Lumped isoprene dinitrates | 192.15 | Gas | - | X | X | X | X | ? | - | - | - |
| IDNOO | C5H9N2O6 | IDNOO | 241.14 | Gas | X | - | - | - | - | ? | - | - | - |
| IEPOX | C5H10O3 | Isoprene epoxide | 118.0 | Gas | X | X | X | X | All | v9-02g | |||
| IEPOXA | C4H10O3 | trans-Beta isoprene epoxydiol | 106.14 | Gas | X | X | X | X | - | All | - | - | v11-02c |
| IEPOXAOO | C5H8O5 | Peroxy radical from trans-Beta isoprene epoxydiol | 149.14 | Gas | X | - | - | - | - | ? | - | - | - |
| IEPOXB | C4H10O3 | cis-Beta isoprene epoxydiol | 106.14 | Gas | X | X | X | X | - | All | v11-02c | ||
| IEPOXBOO | C5H9O5 | peroxy radical from cis-Beta isoprene epoxydiol | 149.14 | Gas | - | - | - | - | - | ? | - | - | -
|
| IEPOXD | C4H10O3 | Delta isoprene epoxydiol | 106.14 | Gas | X | X | X | X | - | All | - | - | v11-02c |
| IEPOXOO | RO2 from IEPOX | Gas | X | All | v9-02g
| ||||||||
| IHN1 | C5H9NO4 | Isoprene-d-4,1-hydroxynitrate | 147.15 | Gas | - | X | X | X | X | ? | - | - | - |
| IHN2 | C5H9NO4 | Isoprene-b-1,2-hydroxynitrate | 147.15 | Gas | - | X | X | X | X | ? | - | - | - |
| IHN3 | C5H9NO4 | Isoprene-b-4,3-hydroxynitrate | 147.15 | Gas | - | X | X | X | X | ? | - | - | - |
| IHN4 | C5H9NO4 | Isoprene-d-4,1-hydroxynitrate | 147.15 | Gas | - | X | X | X | X | ? | - | - | - |
| IHOO1 | C5H9O3 | Peroxy radical from OH addition to isoprene at C1 | 117.14 | Gas | - | - | - | - | - | ? | - | - | - |
| IHOO4 | C5H9O3 | Peroxy radical from OH addition to isoprene at C4 | 117.14 | Gas | - | - | - | - | - | ? | - | - | - |
| IHPNBOO | C5H10NO8 | Peroxy radicals from INPB | 212.16 | Gas | X | - | - | - | - | ? | - | - | - |
| IHPNDOO | C5H10NO8 | Peroxy radicals from INPD | 212.16 | Gas | X | - | - | - | - | ? | - | - | - |
| IHPOO1 | C5H11O6 | Peroxy radical from ISOPOOH | 167.16 | Gas | X | - | - | - | - | ? | - | - | - |
| IHPOO2 | C5H11O6 | Peroxy radical from ISOPOOH | 167.16 | Gas | X | - | - | - | - | ? | - | - | - |
| IHPOO3 | C5H11O6 | Peroxy radical from ISOPOOH | 167.16 | Gas | X | - | - | - | - | ? | - | - | - |
| IMAE | C4H6O3 | C4 epoxide from oxidation of PMN | 102.0 | Gas | X | X | X | X | All | v11-02c | |||
| INA | C5H8NO4 | Alkoxy radical from INO2D | 146.14 | Gas | X | - | - | - | - | ? | - | - | - |
| INDIOL | - | Generic aerosol-phase organonitrate hydrolysis product | 102.0 | Aer | - | X | X | X | - | All | v11-02c | ||
| INO | INO | Nitrosyl iodide | 156.91 | Gas | - | X | - | - | X | Halogens | - | - | v11-02d |
| INO2 | O2NOCH2C(OO)(CH3)CH=CH2 | RO2 from ISOP+NO3 | Gas | X | All | 1 | |||||||
| INO2B | C5H8NO5 | beta-peroxy radicals from isoprene + NO3 | 162.14 | Gas | X | - | - | - | - | ? | - | - | - |
| INO2D | C5H8NO5 | delta-peroxy radicals from isoprene + NO3 | 162.14 | Gas | X | - | - | - | - | ? | - | - | - |
| INPB | C5H9NO5 | Lumped b-hydroperoxy isoprene nitrates | 163.15 | Gas | X | X | X | X | X | ? | - | - | - |
| INPD | C5H9NO5 | Lumped d-hydroperoxy isoprene nitrates | 163.15 | Gas | X | X | X | X | X | ? | - | - | - |
| INPN | O2NOCH2C(OOH)(CH3)CH=CH2 | Peroxide from INO2 | Gas | X | X | All | 1 | ||||||
| IO | IO | Iodine monoxide | 142.9 | Gas | X | X | - | - | X | Halogens | - | - | v11-02d |
| IONITA | - | Aer-phase organic nitrate from isoprene precursors | 14.01 | Aer | X | X | X | X | - | Al | - | - | v11-02c |
| IONO | IONO | Nitryl iodide | 172.91 | Gas | X | X | X | X | X | Halogens | - | - | v11-02d |
| IONO2 | IONO2 | Iodine nitrate | 188.91 | Gas | X | X | X | X | X | Halogens | - | - | v11-02d |
| IPMN | CH2=C(CH3)C(O)OONO2 | Peroxymethacryloyl nitrate (MPAN) from isoprene oxidation | 147.0 | Gas | X | X | X | X | All | 1 | v11-02c | ||
| IPRNO3 | C3H7ONO2 | Isopropyl nitrate | 105.11 | Gas | X | X | X | - | X | ? | - | - | - |
| ISALA | I | Fine sea salt iodine | 126.9 | Aer | - | X | X | X | - | Halogens | - | - | v11-02d |
| ISALC | I | Coarse sea salt iodine | 126.9 | Aer | - | X | X | X | - | Halogens | - | - | v11-02d |
| ISN1 | C5H8NO4 | Nighttime isoprene nitrate | 147.0 | Gas | X | X | X | X | X | All | 1 | v11-02c | |
| ISN1OA | C5H10O8N2 | Aerosol-phase 2nd generation hydroxynitrates formed from ISOP+NO3 reaction pathway | 226.0 | Aer | X | X | X | X | X | All | 1 | v11-02c | |
| ISN1OG | C5H10O8N2 | Gas-phase 2nd generation hydroxynitrates formed from ISOP+NO3 reaction pathway | 226.0 | Aer | X | X | X | X | X | All | 1 | v11-02c | |
| ISNOOA | Peroxy radical from ISN1 | Gas | X | All | 1 | v9-02g | |||||||
| ISNOOB | Peroxy radical from ISN1 | Gas | X | All | 1 | v9-02g | |||||||
| ISNOHOO | Peroxy radical from ISN1 | Gas | X | All | 1 | v9-02g | |||||||
| ISNP | HOCH2C(OOH)(CH3)CH(ONO2)CH2OH | Isoprene nitrate | Gas | X | X | All | 1 | ||||||
| ISOA1 ISOA2 ISOA3 |
Lumped semivolatile aerosol products of isoprene oxidation | 150.0 | Aer | X | X | X | Complex SOA | v9-02o | |||||
| ISOG1 ISOG2 ISOG3 |
Lumped semivolatile gas products of isoprene oxidation | 150.0 | Gas | X | X | X | Complex SOA | v9-02o | |||||
| ISOP | CH2=C(CH3)CH=CH2 | Isoprene | 68.13 | Gas | X | X | - | - | - | - | 
|
- | - |
| ISOPNB | C5H9NO4 | Isoprene nitrate Beta | 147.0 | Gas | X | X | X | X | X | All | 1 | v9-02g | |
| ISOPNOO1 | C5H10NO7 | Peroxy radicals from IHN2 | 196.16 | Gas | X | - | - | - | - | ? | - | - | - |
| ISOPNOO2 | C5H10NO7 | Peroxy radicals from IHN3 | 196.16 | Gas | X | - | - | - | - | ? | - | - | - |
| ISOPNBO2 | Product of ISOPNB+OH | Gas | X | All | v9-02g | ||||||||
| ISOPND | C5H9NO4 | Isoprene nitrate Delta | 147.0 | Gas | X | X | X | X | X | All | 1 | v9-02g | |
| ISOPNDO2 | Product of ISOPND+OH | Gas | X | All | v9-02g | ||||||||
| ITCN | C5H9NO7 | lumped isoprene tetrafunctional carbonylnitrates | 195.15 | Gas | - | X | X | X | X | ? | - | - | - |
| ITHN | C5H11NO7 | Lumped isoprene tetrafunctional hydroxynitrates | 197.17 | Gas | - | X | X | X | X | ? | - | - | - |
J-K-L
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KO2 | C4H5O3 | Peroxy radical from >3 ketones | 101.09 | Gas | X | - | - | - | - | All | - | - | - |
| LBRO2H | - | Dummy species to track oxidation of BRO2 by HO2 | - | Gas | X | - | - | - | - | All | - | - | v11-02a |
| LBRO2N | - | Dummy species to track oxidation of BRO2 by NO | - | Gas | X | - | - | - | - | All | - | - | v11-02a |
| LCH4 | - | Dummy species to track loss rate of CH4 | - | Gas | X | - | - | - | - | All | - | - | - |
| LCO | - | Dummy species to track loss rate of CO | - | Gas | X | - | - | - | - | All | - | - | - |
| LIMO | C10H16 | Limonene | 136.26 | Gas | X | X | X | X | - | All | - | - | v11-02c |
| LIMO2 | C10H17O3 | Peroxy radical from LIMO | 185.27 | Gas | X | - | - | - | - | ? | - | - | - |
| LISOPNO3 | - | Dummy species to track oxidation of ISOP by NO3 | - | Gas | X | - | - | - | - | All | - | - | v11-02a |
| LISOPOH | - | Dummy species to track oxidation of ISOP by OH | - | Gas | X | - | - | - | - | All | v9-02g | ||
| LNRO2H | - | Dummy species to track oxidation of NRO2 by HO2 | - | Gas | X | - | - | - | - | Complex SOA w/ SVPOA | - | - | v9-02o |
| LNRO2N | - | Dummy species to track oxidation of NRO2 by NO | - | Gas | X | - | - | - | - | Complex SOA w/ SVPOA | - | - | v9-02o |
| LTRO2H | Dummy species to track oxidation of TRO2 by HO2 | Gas | X | All | v11-02a | ||||||||
| LOx | - | Dummy species to track loss rate of Ox | - | Gas | X | - | - | - | - | All | - | - | - |
| LTRO2H | - | Dummy species to track oxidation of TRO2 by HO2 | - | Gas | X | - | - | - | - | All | - | - | - |
| LTRO2N | - | Dummy species to track oxidation of TRO2 by NO | - | Gas | X | - | - | - | - | All | - | - | v11-02a |
| LVOC | C5H14O5 | Gas-phase low-volatility non-IEPOX product of RIP ox | 154.19 | Gas | X | X | X | X | - | All | - | - | v11-02c |
| LVOCOA | C5H14O5 | Aer-phase low-volatility non-IEPOX product of RIP ox | 154.19 | Aer | - | X | X | X | - | All | - | - | v11-02c |
| LXRO2H | - | Dummy species to track oxidation of XRO2 by HO2 | - | Gas | X | - | - | - | - | All | - | - | v11-02a |
| LXRO2N | - | Dummy species to track oxidation of XRO2 by NO | - | Gas | X | - | - | - | - | All | - | - | v11-02a |
M
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MACR | CH2=C(CH3)CHO | Methacrolein | 70.1 | Gas | X | X | X | - | X | All | - | - | - |
| MACR1OO | CH2=C(CH3)C(O)OO | Peroxyacyl radical from MACR + OH | 101.09 | Gas | X | - | - | - | - | All | - | - | - |
| MACR1OOH | CH2=C(CH3)C(O)OOH | Peracid from MACR | 102.1 | Gas | X | X | X | X | X | All | - | - | - |
| MACRN | HOCH2C(ONO2)(CH3)CHO | Nitrate from MACR | 149.0 | Gas | X | X | X | X | X | All | 1 | v9-02g | |
| MACRNO2 | C4H6NO7 | Product of MCRHN + OH | 180.1 | Gas | X | - | - | - | - | All | - | 1 | v9-02g |
| MACROO | Criegee intermediate | Gas | X | All | v11-01d | ||||||||
| MAN2 | HOCH2C(ONO2)(CH3)CHO | RO2 from MACR+NO3 | Gas | X | All | 1 | |||||||
| MAO3 | CH2=C(CH3)C(O)OO | Peroxyacyl from MVK and MACR | Gas | X | All | ||||||||
| MAOP | CH2=C(CH3)C(O)OOH | Peroxide from MAO3 | Gas | X | X | All | v9-02g | ||||||
| MAOPO2 | CH2OH-CHOO*CH3C(O)OOH | Peroxy radical from MAOP (addition on the double bond) | Gas | X | All | ||||||||
| MAP | CH3C(O)OOH | Peroxyacetic acid | 76.06 | Gas | X | X | X | X | X | All | |||
| MBO | CH2=CHC(CH3)2OH | 2-methyl-3-buten-2-ol | Gas | X | All | v11-01d | |||||||
| MBOOO | Criegee intermediate | Gas | X | All | v11-01d | ||||||||
| MCO3 | CH3C(O)OO | Peroxyacetyl radical | 75.05 | Gas | - | - | - | - | - | All | - | - | - |
| MCRDH | C4H8O3 | Dihydroxy-methacrolein | 104.12 | Gas | X | X | X | X | - | All | - | - | - |
| MCRENOL | C4H6O2 | Lumped enols from MVK/MACR | 86.1 | Gas | X | X | X | X | X | All | - | - | - |
| MCRHN | HOCH2C(ONO2)(CH3)CHO | Nitrate from MACR | 149.11 | Gas | X | X | X | X | X | All | - | - | - |
| MCRHNB | O2NOCH2C(OH)(CH3)CHO | Nitrate from MACR | 149.11 | Gas | X | X | X | X | X | All | - | - | - |
| MCRHP | HOCH2C(OOH)(CH3)CHO | Hydroxy-hydroperoxy-methacrolein | 120.12 | Gas | X | X | X | X | X | All | - | - | - |
| MCROHOO | C4H7O4 | Peroxy radical from MACR + OH | 119.11 | Gas | X | - | - | - | - | All | - | - | - |
| MEK | RC(O)R | Methyl Ethyl Ketone | 72.11 | Gas | X | X | - | X | X | All | - | - | - |
| MENO3 | CH3ONO2 | Methyl nitrate | 77.05 | Gas | - | X | X | - | X | All | - | - | - |
| MGLOO | Criegee intermediate | Gas | X | All | v11-01d | ||||||||
| MGLY | CH3COCHO | Methylglyoxal | 72.07 | Gas | - | X | X | X | X | All | - | - | v11-02a |
| MGLYOO | Criegee intermediate | Gas | X | All | v11-01d | ||||||||
| MNO3 | CH3ONO2 | Methylnitrate | Gas | X | All | 1 | v9-02g | ||||||
| MOBA | HOC(=O)C(CH3)=CHCHO | 5C acid from isoprene | 114.0 | Gas | X | X | X | All | v9-02g | ||||
| MOBAOO | RO2 from MOBA | Gas | X | All | v9-02g | ||||||||
| MO2 | CH3O2 | Methylperoxy radical | 47.04 | Gas | X | - | - | - | - | All | - | - | - |
| MOH | CH3OH | Methanol | 32.05 | Gas | - | X | X | X | - | All | - | - | - |
| MONITA | - | Aer-phase organic nitrate from monoterpene precursors | 14.01 | Aer | - | X | X | X | - | All | v11-02c | ||
| MONITS | C10H17NO4 | Saturated 1st gen monoterpene organic nitrate | 215.28 | Gas | X | X | X | X | X | All | v11-02c | ||
| MONITU | C10H17NO4 | Unsaturated 1st gen monoterpene organic nitrate | 215.28 | Gas | X | X | X | X | X | All | v11-02c | ||
| MOPI | C | Hydrophilic marine organic carbon aerosol | 12.01 | Aer | - | X | X | X | - | MarinePOA | - | - | - |
| MOPO | C | Hydrophobic marine organic carbon aerosol | 12.01 | Aer | - | X | X | X | - | MarinePOA | - | - | - |
| MONX | - | Total monoterpenes | - | Gas | X | - | - | - | - | All | - | - | Removed in v11-02e |
| MP | CH3OOH | Methyl hydro peroxide | 48.05 | Gas | X | X | - | X | X | All | - | - | - |
| MPAN | CH2=C(CH3)C(O)OONO2 | Peroxymethacroyl nitrate (PMN) | 147.1 | Gas | - | X | X | X | X | All | - | 1 | - |
| MPN | CH3O2NO2 | Methyl peroxy nitrate | 93.05 | Gas | - | X | - | X | X | All | - | 1 | v9-02f |
| MRO2 | HOCH2C(OO)(CH3)CHO | RO2 from MACR+OH | Gas | X | All | ||||||||
| MRP | HOCH2C(OOH)(CH3)CHO | Peroxide from MRO2 | Gas | X | X | All | |||||||
| MSA | CH4SO3 | Methyl sulfonic acid | 96.1 | Aer | - | X | X | X | - | All | - | - | - |
| MTPA | - | a-pinene, b-pinene, sabinene, carene | 136.26 | Gas | X | X | X | X | - | All | - | - | v11-02a |
| MTPO | - | Terpinene, terpinolene, myrcene, ocimene, other monoterpenes | 136.26 | Gas | X | X | X | X | - | All | - | - | v11-02e |
| MVK | CH2=CHC(=O)CH3 | Methyl vinyl ketone | 70.09 | Gas | X | X | X | X | X | All | - | - | - |
| MVKDH | HOCH2CH2OHC(O)CH3 | dihydroxy-MVK | 105.13 | Gas | - | X | X | X | - | All | - | - | - |
| MVKHC | C4H6O3 | MVK hydroxy-carbonyl | 102.1 | Gas | - | X | X | X | X | All | - | - | - |
| MVKHCB | C4H6O3 | MVK hydroxy-carbonyl | 102.1 | Gas | - | X | X | X | X | All | - | - | - |
| MVKHP | C4H8O4 | MVK hydroxy-hydroperoxide | 120.12 | Gas | - | X | X | X | X | All | - | - | - |
| MVKN | HOCH2CH(ONO2)C(=O)CH3 | Nitrate from MVK | 149.12 | Gas | - | X | X | X | X | All | - | 1 | v9-02g |
| MVKOHOO | C4H7O4 | Peroxy radical from MVK + OH | 119.11 | Gas | - | - | - | - | - | All | - | 1 | - |
| MVKOO | Criegee intermediate | Gas | X | All | v11-01d | ||||||||
| MVKPC | OCHCH(OOH)C(O)CH3 | MVK hydroperoxy-carbonyl | 118.1 | Gas | - | X | X | X | X | All | - | - | - |
N
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| N | N | Atomic nitrogen | 14.01 | Gas | X | - | - | - | - | Standard | - | - | v10-01c |
| N2 | N2 | Molecular nitrogen | 28.02 | Gas | X | - | - | - | - | All | - | - | - |
| N2O | N2O | Nitrous oxide | 44.02 | Gas | X | X | - | - | X | Standard | 
|
- | v10-01c |
| N2O5 | N2O5 | Dinitrogen pentoxide | 108.02 | Gas | X | X | X | - | - | All | 
|
3 | - |
| NAP | C10H8 | Naphtalene/IVOC surrogate | 128.18 | Gas | X | X | - | - | - | Complex SOA w/ SVPOA | v9-02o | ||
| NH2 | NH2 | Ammonia radical | 16.0 | Gas | X | All | |||||||
| NH3 | NH3 | Ammonia | 17.04 | Gas | - | X | X | X | - | All | - | - | - |
| NH4 | NH4 | Ammonium | 18.05 | Aer | - | X | X | X | - | All | |||
| NIT | - | Inorganic nitrates | 62.01 | Aer | - | X | X | X | X | All | - | - | - |
| NITD1 | - | Nitrate on dust, Reff = 0.7 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | - |
| NITD2 | - | Nitrate on dust, Reff = 1.4 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | - |
| NITD3 | - | Nitrate on dust, Reff = 2.4 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | - |
| NITD4 | - | Nitrate on dust, Reff = 4.5 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | - |
| NITs | - | Inorganic nitrates on surface of seasalt aerosol | 31.4 | Aer | - | X | X | X | X | All | - | - | - |
| NO | NO | Nitrogen oxide | 30.01 | Gas | X | X | - | - | X | All | |||
| NO2 | NO2 | Nitrogen dioxide | 46.01 | Gas | - | X | X | - | X | All | 
|
1 | - |
| NO3 | NO3 | Nitrate radical | 62.01 | Gas | X | X | - | - | X | All | 2 | ||
| NPMN | CH2=C(CH3)C(O)OONO2 | Non-isoprene peroxymethacryloyl nitrate (MPAN) | 147.0 | Gas | X | X | X | All | 1 | v11-02c | |||
| NRO2 | Peroxy radical from naphthalene oxidation | Gas | X | Complex SOA w/ SVPOA | v9-02o
| ||||||||
| NPRNO3 | C3H7ONO2 | n-propyl nitrate | 105.11 | Gas | X | X | X | - | X | Standard | - | - | - |
| NRO2 | C10H7O2 | Peroxy radical from NAP oxidation | 159.17 | Gas | X | - | - | - | - | Standard | - | - | - |
O
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| O | O(3P) | Ground state atomic oxygen | 16.0 | Gas | X | - | - | - | - | Standard | 
|
1 | v10-01c |
| O1D | O(1D) | Excited atomic oxygen (1D) | 16.0 | Gas | X | - | - | - | - | Standard |
|
1 | v10-01c |
| O2 | O2 | Molecular oxygen | 32.0 | Gas | - | - | - | - | X | All | - | - | - |
| O3 | O3 | Ozone | 48.0 | Gas | X | X | X | - | X | All | 
|
1 | - |
| OClO | OClO | Chlorine dioxide | 67.5 | Gas | - | X | - | - | X | Standard | - | 2 | v10-01c |
| OCPI | - | Hydrophilic organic carbon aerosol | 12.01 | Aer | - | X | X | X | - | All | - | - | -
|
| OCPO | - | Hydrophobic organic carbon aerosol | 12.01 | Aer | - | X | X | X | - | All | - | - | - |
| OCS | COS | Carbonyl sulfide | 60.07 | Gas | X | X | - | - | X | Standard | 
|
- | v10-01c |
| OH | OH | Hydroxyl radical | 17.01 | Gas | X | - | - | - | - | All | - | - | - |
| OIO | OIO | Iodine dioxide | 158.9 | Gas | X | X | - | - | - | Halogens | - | - | v11-02d |
| OLND | C10H16NO5 | Monoterpene-derived NO3-alkene adduct | 230.27 | Gas | X | - | - | - | - | All | - | - | v11-02c |
| OLNN | C10H16NO5 | Monoterpene-derived NO3 adduct | 230.27 | Gas | - | - | - | - | - | All | - | - | v11-02c |
| ONIT | Organic nitrate | Gas | X | All | |||||||||
| OPOA1 OPOA2 |
Lumped aerosol primary SVOCs | 12.01 | Aer | X | X | X | - | Complex SOA w/ SVPOA | - | - | v9-02o | ||
| OPOG1 OPOG2 |
Lumped gas primary SVOCs | 12.01 | Gas | - | X | X | X | - | Complex SOA w/ SVPOA | - | - | v9-02o | |
| OTHRO2 | CH3CH2OO | Other C2 RO2 not from C2H6 oxidation | 61.07 | Gas | X | - | - | - | - | - | - | - | - |
P-Q
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PAN | CH3C(O)OONO2 | Peroxyacetyl nitrate | 121.06 | Gas | X | X | X | X | X | All | 
|
1 | - |
| PCO | - | Dummy species to track production rate of CO | - | Gas | X | - | - | - | - | All | - | - | - |
| pFe | Fe | Anthropogenic iron | 55.85 | Aer | - | X | X | X | - | - | - | - | - |
| PH2O2 | - | Dummy species to track production rate of H2O2 | - | Gas | X | - | - | - | - | - | - | - | - |
| PIO2 | C10H17O3 | Peroxy radical from MTPA | 185.27 | Gas | X | - | - | - | - | All | v11-02a | ||
| PIP | C10H18O3 | Peroxide from MTPA | 186.28 | Gas | X | X | - | - | X | All | - | - | v11-02a |
| PMNN | Product of PMNO2+NO | Gas | X | All | 1 | v9-02g | |||||||
| PMNO2 | Product of PMN+OH | Gas | X | All | 1 | v9-02g | |||||||
| PO2 | HOCH2CH(OO)CH3 | Peroxy radical from propene | 91.1 | Gas | X | - | - | - | - | All | - | - | - |
| POA1 POA2 |
- | Lumped aerosol primary SVOCs | 12.01 | Aer | - | X | X | X | - | Complex SOA w/ SVPOA | - | - | v9-02o |
| POG1 POG2 |
- | Lumped gas primary SVOCs | 12.01 (12, 1C) |
Gas | X | X | X | X | - | Complex SOA w/ SVPOA | - | - | v9-02o |
| POx | - | Dummy species to track production rate of Ox | - | Gas | X | - | - | - | - | All | - | - | - |
| PP | HOCH2CH(OOH)CH3 | Peroxide from PO2 | 92.11 | Gas | X | X | X | X | X | All | - | - | - |
| PPN | CH3CH2C(O)OONO2 | Lumped peroxypropionyl nitrate | 135.08 | Gas | - | X | X | X | - | All | - | 1 | - |
| PRN1 | O2NOCH2CH(OO)CH3 | Peroxy radical from propene + NO3 | 136.09 | Gas | X | - | - | - | - | All | - | 1 | - |
| PROPNN | CH3C(=O)CH2ONO2 | Propanone nitrate | 119.08 | Gas | X | X | X | X | X | All | 
|
1 | v9-02g |
| PRPE | C3H6 | Lumped >= C3 alkenes | 42.09 | Gas | X | X | - | X | - | All | - | - | - |
| PRPN | O2NOCH2CH(OOH)CH3 | Peroxide from PRN1 | 137.11 | Gas | X | X | X | X | X | All | - | 1 | - |
| PSO4 | - | Dummy species to track production of SO4 | - | Gas | X | - | - | - | - | All | - | - | - |
| PYAC | C3H4O3 | Pyruvic acid | 88.07 | Gas | X | X | X | X | X | All | - | - | v9-02g |
R
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| R4N1 | C4H8NO5 | Peroxy radical from R4N2 | 150.13 | Gas | - | - | - | - | - | All | - | 1 | - |
| R4N2 | RO2NO | Lumped alkyl nitrate | 119.1 | Gas | X | X | X | X | X | All | - | 1 | - |
| R4O2 | C4H9O2 | Peroxy radical from ALK4 | 89.13 | Gas | X | - | - | - | - | All | - | - | - |
| R4P | CH3CH2CH2CH2OOH | Peroxide from R4O2 | 90.14 | Gas | X | X | X | X | X | All | - | - | - |
| RA3P | CH3CH2CH2OOH | Peroxide from A3O2 | 76.11 | Gas | X | X | X | X | X | All | - | - | - |
| RB3P | CH3CH(OOH)CH3 | Peroxide from B3O2 | 76.11 | Gas | X | X | X | X | X | All | - | - | - |
| RCHO | CH3CH2CHO | Lumped aldehyde >= C3 | 58.09 | Gas | X | X | - | - | X | All | - | - | - |
| RCO3 | CH3CH2C(O)OO | Peroxypropionyl radical | 89.08 | Gas | X | - | - | - | - | All | - | - | - |
| RCOOH | C2H5C(O)OH | > C2 organic acids | 74.09 | Gas | - | - | - | - | - | All | - | - | - |
| RIO2 | HOCH2C(OO)(CH3)CH=CH2
(example - all isomers lumped) |
RO2 from isoprene (named as ISOPO2 in the literature) | 117 | Gas | X | All | 
|
||||||
| RIPA | C5H10O3 | 1,2-ISOPOOH | 118.15 | Gas | - | X | X | X | X | All | - | - | v11-02c |
| RIPB | C5H10O3 | 4,3-ISOPOOH | 118.15 | Gas | X | X | X | X | X | All | - | - | v11-02c |
| RIPC | C5H10O3 | d-1,4-ISOPOOH | 118.15 | Gas | X | X | X | X | X | All | - | - | 12.8.0 |
| RIPD | C5H10O3 | d-4,1-ISOPOOH | 118.15 | Gas | X | X | X | X | X | All | - | - | v11-02c |
| ROH | C3H7OH | > C2 alcohols | 60.11 | Gas | X | - | - | - | - | All | - | - | v9-01-03a |
| RP | CH3CH2C(O)OOH | Peroxide from RCO3 | 90.09 | Gas | X | X | X | X | X | All |
S
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| S | S | Atomic sulfur | 32.06 | X | - | - | - | - | - | Standard | - | - | 12.8.0 |
| SALA | - | Fine (0.01-0.05 microns) sea salt aerosol | 31.4 | Aer | - | X | X | X | - | All | - | - | - |
| SALAAL | - | Fine (0.01-0.05 microns) sea salt alkalinity | 31.4 | Aer | - | X | X | X | - | All | - | - | 12.9.0 |
| SALACL | - | Chloride in fine (0.01-0.05 microns) sea salt aerosol | 31.4 | Aer | - | X | X | X | - | All | - | - | 12.9.0 |
| SALC | - | Coarse (0.5-8 microns) sea salt aerosol | 31.4 | Aer | - | X | X | X | - | All | - | - | - |
| SALCAL | - | Coarse (0.5-8 microns) sea salt alkalinity | 31.4 | Aer | - | X | X | X | - | All | - | - | 12.9.0 |
| SALCCL | - | Chloride in coarse (0.5-8 microns) sea salt aerosol | 31.4 | Aer | - | X | X | X | - | All | - | - | 12.9.0 |
| SO2 | SO2 | Sulfur dioxide | 64.04 | Gas | X | X | X | X | - | All | - | - | - |
| SO4 | SO4 | Sulfate | 96.06 | Aer | X | X | X | X | X | All | - | - | - |
| SO4H1 SO4H2 |
SO4 | Sulfate produced by HOBr | 96.06 | Gas | X | - | - | - | - | Standard | - | - | 12.8.0 |
| SO4s | - | Sulfate on surface of seasalt aerosol | 31.4 | Aer | - | X | X | X | - | All | - | - | - |
| SO4D1 | - | Sulfate on dust, Reff = 0.7 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | - |
| SO4D2 | - | Sulfate on dust, Reff = 1.4 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | - |
| SO4D3 | - | Sulfate on dust, Reff = 2.4 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | - |
| SO4D4 | - | Sulfate on dust, Reff = 4.5 microns | 29.0 | Aer | - | X | X | X | - | Aciduptake | - | - | - |
| SOAGX | C2H2O2 | Aerosol-phase glyoxal | 58.04 | Aer | - | X | X | X | - | ? | - | - | - |
| SOAIE | C5H10O3 | Aerosol-phase IEPOX | 118.15 | Aer | - | X | X | X | - | All | - | - | v11-02c |
| SOAGX | C2H2O2 | Aerosol-phase glyoxal | 58.0 | Aer | X | X | X | X | All | v11-02c | |||
| SOAME | C4H6O3 | Aerosol-phase IMAE | 102.0 | Aer | X | X | X | X | All | v11-02c | |||
| SOAMG | C3H4O2 | Aerosol-phase methylglyoxal | 72.0 | Aer | X | X | X | X | - | All | - | - | v11-02c |
| SOAP | - | SOA Precursor - lumped species for simplified SOA parameterization | 150.0 | Gas | - | X | - | - | - | Standard | - | - | v11-02c |
| SOAS | - | SOA Simple - simplified non-volatile SOA parameterization | 150.0 | Aer | X | X | X | X | - | Standard | - | - | v11-02c |
T through Z
| Species | Formula | Full name | Molec wt (g/mol) |
Gas or Aer | In Kpp |
Adv ect |
Dry dep |
Wet dep |
Pho tol |
Mechanisms | Structure | Ox? | Version added/ updated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TOLU | C7H8 | Toluene | 92.15 | Gas | X | X | - | - | - | All | - | - | v11-02a |
| TRO2 | C7H9O5 | Peroxy radical from TOLU oxidation | 173.16 | Gas | X | - | - | - | - | All | - | - | v11-02a |
| TSOA0 TSOA1 TSOA2 TSOA3 |
- | Lumped semivolatile aerosol products of monoterpene + sesquiterpene oxidation | 150.0 | Aer | X | X | X | X | - | Complex SOA | - | - | v9-02o |
| TSOG0 TSOG2 TSOG3 TSOG4 |
- | Lumped semivolatile gas products of monoterpene + sesquiterpene oxidation | 150.0 | Gas | X | X | X | X | - | Complex SOA | v9-02o | ||
| VRO2 | HOCH2CH(OO)C(O)CH3 | RO2 from MVK+OH | Gas | X | All | ||||||||
| VRP | HOCH2CH(OOH)C(O)CH3 | Peroxide from VRO2 | - | Gas | X | - | - | - | X | All | - | - | - |
| XRO2 | C8H11O5 | Peroxy radical from TOLU oxidation | 187.19 | Gas | - | - | - | - | - | All | - | - | v11-02a |
| XYLE | C8H10 | Xylene | 106.18 (12, 8C) |
Gas | - | X | - | - | - | All | - | - | v11-02a |
--Melissa Sulprizio (talk) 17:52, 14 November 2016 (UTC)
--Bob Yantosca (talk) 20:44, 13 December 2016 (UTC)
Aerosol-only
The following table lists the species in the aerosol-only simulation.
| Species | Full name | Molec wt (g/mol) |
Gas or Aer | Advect | Drydep | Wetdep |
|---|---|---|---|---|---|---|
| DMS | Dimethylsulfide | 62 | Aer | X | ||
| SO2 | Sulfur dioxide | 64 | Gas | X | X | X |
| SO4 | Sulfate | 96 | Aer | X | X | X |
| SO4s | Sulfate on surface of sea salt | 31.4 | Aer | X | X | X |
| MSA | Methanesulfonic acid | 96 | Aer | X | X | X |
| NH3 | Ammonia | 17 | Gas | X | X | X |
| NH4 | Ammonium | 18 | Aer | X | X | X |
| NIT | Inorganic nitrates | 62 | Aer | X | X | X |
| NITs | Inorganic nitrates on surface of sea salt | 31.4 | Aer | X | X | X |
| H2O2 | Hydrogen peroxide | 34 | Gas | X | X | X |
| BCPI | Hydrophilic black carbon aerosol | 12, 1C | Aer | X | X | X |
| OCPI | Hydrophilic organic carbon aerosol | 12, 1C | Aer | X | X | X |
| BCPO | Hydrophobic black carbon aerosol | 12, 1C | Aer | X | X | X |
| OCPO | Hydrophobic organic carbon aerosol | 12, 1C | Aer | X | X | X |
| DST1 | Dust aerosol, Reff = 0.7 microns | 29 | Aer | X | X | X |
| DST2 | Dust aerosol, Reff = 1.4 microns | 29 | Aer | X | X | X |
| DST3 | Dust aerosol, Reff = 2.4 microns | 29 | Aer | X | X | X |
| DST4 | Dust aerosol, Reff = 4.5 microns | 29 | Aer | X | X | X |
| SALA | Accumulation mode sea salt aerosol | 31.4 | Aer | X | X | X |
| SALC | Coarse mode sea salt aerosol | 31.4 | Aer | X | X | X |
| MTPA | Lumped monoterpenes (a-pinene, b-pinene, sabinene, carene) | 136.23 | Gas | X | X | X |
| LIMO | Limonene | 136.23 | Gas | X | X | X |
| MTPO | Terpinene, terpinolene, myrcene, ocimene, other monoterpenes | 136.23 | Gas | X | X | X |
| TSOG0 | Lumped semivolatile gas products of monoterpene + sesquiterpene oxidation | 150 | Gas | X | X | X |
| TSOG1 | Lumped semivolatile gas products of monoterpene + sesquiterpene oxidation | 150 | Gas | X | X | X |
| TSOG2 | Lumped semivolatile gas products of monoterpene + sesquiterpene oxidation | 150 | Gas | X | X | X |
| TSOG3 | Lumped semivolatile gas products of monoterpene + sesquiterpene oxidation | 150 | Gas | X | X | X |
| TSOA0 | Lumped semivolatile aerosol products of monoterpene + sesquiterpene oxidation | 150 | Aer | X | X | X |
| TSOA1 | Lumped semivolatile aerosol products of monoterpene + sesquiterpene oxidation | 150 | Aer | X | X | X |
| TSOA2 | Lumped semivolatile aerosol products of monoterpene + sesquiterpene oxidation | 150 | Aer | X | X | X |
| TSOA3 | Lumped semivolatile aerosol products of monoterpene + sesquiterpene oxidation | 150 | Aer | X | X | X |
| ISOG1 | Lumped semivolatile gas products of isoprene oxidation | 150 | Gas | X | X | X |
| ISOG2 | Lumped semivolatile gas products of isoprene oxidation | 150 | Gas | X | X | X |
| ISOG3 | Lumped semivolatile gas products of isoprene oxidation | 150 | Gas | X | X | X |
| ISOA1 | Lumped semivolatile aerosol products of isoprene oxidation | 150 | Aer | X | X | X |
| ISOA2 | Lumped semivolatile aerosol products of isoprene oxidation | 150 | Aer | X | X | X |
| ISOA3 | Lumped semivolatile aerosol products of isoprene oxidation | 150 | Aer | X | X | X |
| BENZ | Benzene | 12, 6C | Gas | X | ||
| TOLU | Toluene | 12, 7C | Gas | X | ||
| XYLE | Xylene | 12, 8C | Gas | X | ||
| ASOG1 | Lumped semivolatile gas products of light aromatics and IVOCs | 150 | Gas | X | X | X |
| ASOG2 | Lumped semivolatile gas products of light aromatics and IVOCs | 150 | Gas | X | X | X |
| ASOG3 | Lumped semivolatile gas products of light aromatics and IVOCs | 150 | Gas | X | X | X |
| ASOA1 | Lumped semivolatile aerosol products of light aromatics and IVOCs | 150 | Aer | X | X | X |
| ASOA2 | Lumped semivolatile aerosol products of light aromatics and IVOCs | 150 | Aer | X | X | X |
| ASOA3 | Lumped semivolatile aerosol products of light aromatics and IVOCs | 150 | Aer | X | X | X |
| ASOAN | Lumped nonvolatile aerosol products of light aromatics and IVOCs | 150 | Aer | X | X | X |
--Melissa Sulprizio (talk) 22:11, 17 November 2016 (UTC)
CO2
The following table lists the species in the CO2 simulation.
| Species | Full name | Molec wt (g/mol) |
Gas or Aer | Advect | Drydep | Wetdep |
|---|---|---|---|---|---|---|
| CO2 | Total carbon dioxide | 44 | Gas | X | ||
| You may add the following species for a tagged CO2 simulation: | ||||||
| CO2ff | CO2 from fossil fuel emissions | 44 | Gas | X | ||
| CO2oc | CO2 from ocean emissions | 44 | Gas | X | ||
| CO2bal | CO2 from balanced biosphere | 44 | Gas | X | ||
| CO2bb | CO2 from biomass burning emissions | 44 | Gas | X | ||
| CO2bf | CO2 from biofuel burning emissions | 44 | Gas | X | ||
| CO2nte | CO2 from net terrestrial exchange | 44 | Gas | X | ||
| CO2se | CO2 from ship emissions | 44 | Gas | X | ||
| CO2av | CO2 from aircraft emissions | 44 | Gas | X | ||
| CO2ch | CO2 from chemical source | 44 | Gas | X | ||
| CO2corr | CO2 from chemical source surface correction | 44 | Gas | X | ||
| CO2bg | CO2 background (including only fossil fuel CO2) |
44 | Gas | X | ||
| CO2xx | CO2 tracers produced in various regions | 44 | Gas | X | ||
--Melissa Sulprizio (talk) 22:38, 17 November 2016 (UTC)
CH4
The following table lists the species in the CH4 simulation.
| Species | Full name | Molec wt (g/mol) |
Gas or Aer | Advect | Drydep | Wetdep |
|---|---|---|---|---|---|---|
| CH4 | Total methane | 16 | Gas | X | ||
| You may add the following species for a tagged CH4 simulation: | ||||||
| CH4_OIL | CH4 from oil emissions | 16 | Gas | X | ||
| CH4_GAS | CH4 from gas emissions | 16 | Gas | X | ||
| CH4_COL | CH4 from coal mining emissions | 16 | Gas | X | ||
| CH4_LIV | CH4 from livestock emissions | 16 | Gas | X | ||
| CH4_LDF | CH4 from landfill emissions | 16 | Gas | X | ||
| CH4_WST | CH4 from waste emissions | 16 | Gas | X | ||
| CH4_RIC | CH4 from rice emissions | 16 | Gas | X | ||
| CH4_OTA | CH4 from other anthropogenic emissions | 16 | Gas | X | ||
| CH4_BBN | CH4 from biomass burning emissions | 16 | Gas | X | ||
| CH4_WTL | CH4 from wetland emissions | 16 | Gas | X | ||
| CH4_SEE | CH4 from geological seep emissions | 16 | Gas | X | ||
| CH4_LAK | CH4 from lake emissions | 16 | Gas | X | ||
| CH4_TER | CH4 from termite emissions | 16 | Gas | X | ||
| CH4_SAB | CH4 from soil absorption emissions | 16 | Gas | X | ||
--Melissa Sulprizio (talk) 13:23, 28 April 2020 (UTC)
Hg
The following table lists the species in the Hg simulation.
| Species | Full name | Molec wt (g/mol) |
Gas or Aer | Advect | Drydep | Wetdep |
|---|---|---|---|---|---|---|
| Hg0 | Total elemental mercury | 201 | Gas | X | X | |
| Hg2 | Total divalent mercury | 201 | Gas | X | X | X |
| HgP | Total particulate mercury | 201 | Aer | X | X | X |
| You may add the following species for tagged Hg simulation: | ||||||
| Hg0_can | Elemental mercury from Canada anthro | 201 | Gas | X | X | |
| Hg0_usa | Elemental mercury from USA anthro | 201 | Gas | X | X | |
| Hg0_cam | Elemental mercury from Centeral America anthro | 201 | Gas | X | X | |
| Hg0_sam | Elemental mercury from South America anthro | 201 | Gas | X | X | |
| Hg0_waf | Elemental mercury from West Africa anthro | 201 | Gas | X | X | |
| Hg0_eaf | Elemental mercury from East Africa anthro | 201 | Gas | X | X | |
| Hg0_saf | Elemental mercury from South Africa anthro | 201 | Gas | X | X | |
| Hg0_naf | Elemental mercury from North Africa anthro | 201 | Gas | X | X | |
| Hg0_eur | Elemental mercury from Europe anthro | 201 | Gas | X | X | |
| Hg0_eeu | Elemental mercury from Eastern Europe anthro | 201 | Gas | X | X | |
| Hg0_sov | Elemental mercury from Former USSR anthro | 201 | Gas | X | X | |
| Hg0_mde | Elemental mercury from Middle East anthro | 201 | Gas | X | X | |
| Hg0_sas | Elemental mercury from South Asia anthro | 201 | Gas | X | X | |
| Hg0_sov | Elemental mercury from East Asia anthro | 201 | Gas | X | X | |
| Hg0_sea | Elemental mercury from Southeast Asia anthro | 201 | Gas | X | X | |
| Hg0_jpn | Elemental mercury from Japan anthro | 201 | Gas | X | X | |
| Hg0_oce | Elemental mercury from Ocean anthro | 201 | Gas | X | X | |
| Hg0_so | Elemental mercury from Organic soils | 201 | Gas | X | X | |
| Hg0_bb | Elemental mercury from Biomass burning | 201 | Gas | X | X | |
| Hg0_geo | Elemental mercury from Geogenic | 201 | Gas | X | X | |
| Hg0_atl | Elemental mercury from Middle Atlantic subsurface waters | 201 | Gas | X | X | |
| Hg0_nat | Elemental mercury from North Atlantic subsurface waters | 201 | Gas | X | X | |
| Hg0_sat | Elemental mercury from South Atlantic subsurface waters | 201 | Gas | X | X | |
| Hg0_npa | Elemental mercury from North Pacific subsurface waters | 201 | Gas | X | X | |
| Hg0_arc | Elemental mercury from Arctic subsurface waters | 201 | Gas | X | X | |
| Hg0_ant | Elemental mercury from Antarctic subsurface waters | 201 | Gas | X | X | |
| Hg0_ocn | Elemental mercury from Indo-Pacific subsurface waters | 201 | Gas | X | X | |
| Hg0_str | Elemental mercury from Stratospheric | 201 | Gas | X | X | |
| Hg2_can | Divalent mercury from Canada anthro | 201 | Gas | X | X | X |
| Hg2_usa | Divalent mercury from USA anthro | 201 | Gas | X | X | X |
| Hg2_cam | Divalent mercury from Centeral America anthro | 201 | Gas | X | X | X |
| Hg2_sam | Divalent mercury from South America anthro | 201 | Gas | X | X | X |
| Hg2_waf | Divalent mercury from West Africa anthro | 201 | Gas | X | X | X |
| Hg2_eaf | Divalent mercury from East Africa anthro | 201 | Gas | X | X | X |
| Hg2_saf | Divalent mercury from South Africa anthro | 201 | Gas | X | X | X |
| Hg2_naf | Divalent mercury from North Africa anthro | 201 | Gas | X | X | X |
| Hg2_eur | Divalent mercury from Europe anthro | 201 | Gas | X | X | X |
| Hg2_eeu | Divalent mercury from Eastern Europe anthro | 201 | Gas | X | X | X |
| Hg2_sov | Divalent mercury from Former USSR anthro | 201 | Gas | X | X | X |
| Hg2_mde | Divalent mercury from Middle East anthro | 201 | Gas | X | X | X |
| Hg2_sas | Divalent mercury from South Asia anthro | 201 | Gas | X | X | X |
| Hg2_sov | Divalent mercury from East Asia anthro | 201 | Gas | X | X | X |
| Hg2_sea | Divalent mercury from Southeast Asia anthro | 201 | Gas | X | X | X |
| Hg2_jpn | Divalent mercury from Japan anthro | 201 | Gas | X | X | X |
| Hg2_oce | Divalent mercury from Ocean anthro | 201 | Gas | X | X | X |
| Hg2_so | Divalent mercury from Organic soils | 201 | Gas | X | X | X |
| Hg2_bb | Divalent mercury from Biomass burning | 201 | Gas | X | X | X |
| Hg2_geo | Divalent mercury from Geogenic | 201 | Gas | X | X | X |
| Hg2_atl | Divalent mercury from Middle Atlantic subsurface waters | 201 | Gas | X | X | X |
| Hg2_nat | Divalent mercury from North Atlantic subsurface waters | 201 | Gas | X | X | X |
| Hg2_sat | Divalent mercury from South Atlantic subsurface waters | 201 | Gas | X | X | X |
| Hg2_npa | Divalent mercury from North Pacific subsurface waters | 201 | Gas | X | X | X |
| Hg2_arc | Divalent mercury from Arctic subsurface waters | 201 | Gas | X | X | X |
| Hg2_ant | Divalent mercury from Antarctic subsurface waters | 201 | Gas | X | X | X |
| Hg2_ocn | Divalent mercury from Indo-Pacific subsurface waters | 201 | Gas | X | X | X |
| Hg2_str | Divalent mercury from Stratospheric | 201 | Gas | X | X | X |
| HgP_can | Particulate mercury from Canada anthro | 201 | Aer | X | X | X |
| HgP_usa | Particulate mercury from USA anthro | 201 | Aer | X | X | X |
| HgP_cam | Particulate mercury from Centeral America anthro | 201 | Aer | X | X | X |
| HgP_sam | Particulate mercury from South America anthro | 201 | Aer | X | X | X |
| HgP_waf | Particulate mercury from West Africa anthro | 201 | Aer | X | X | X |
| HgP_eaf | Particulate mercury from East Africa anthro | 201 | Aer | X | X | X |
| HgP_saf | Particulate mercury from South Africa anthro | 201 | Aer | X | X | X |
| HgP_naf | Particulate mercury from North Africa anthro | 201 | Aer | X | X | X |
| HgP_eur | Particulate mercury from Europe anthro | 201 | Aer | X | X | X |
| HgP_eeu | Particulate mercury from Eastern Europe anthro | 201 | Aer | X | X | X |
| HgP_sov | Particulate mercury from Former USSR anthro | 201 | Aer | X | X | X |
| HgP_mde | Particulate mercury from Middle East anthro | 201 | Aer | X | X | X |
| HgP_sas | Particulate mercury from South Asia anthro | 201 | Aer | X | X | X |
| HgP_sov | Particulate mercury from East Asia anthro | 201 | Aer | X | X | X |
| HgP_sea | Particulate mercury from Southeast Asia anthro | 201 | Aer | X | X | X |
| HgP_jpn | Particulate mercury from Japan anthro | 201 | Aer | X | X | X |
| HgP_oce | Particulate mercury from Ocean anthro | 201 | Aer | X | X | X |
| HgP_so | Particulate mercury from Organic soils | 201 | Aer | X | X | X |
| HgP_bb | Particulate mercury from Biomass burning | 201 | Aer | X | X | X |
| HgP_geo | Particulate mercury from Geogenic | 201 | Aer | X | X | X |
| HgP_atl | Particulate mercury from Middle Atlantic subsurface waters | 201 | Aer | X | X | X |
| HgP_nat | Particulate mercury from North Atlantic subsurface waters | 201 | Aer | X | X | X |
| HgP_sat | Particulate mercury from South Atlantic subsurface waters | 201 | Aer | X | X | X |
| HgP_npa | Particulate mercury from North Pacific subsurface waters | 201 | Aer | X | X | X |
| HgP_arc | Particulate mercury from Arctic subsurface waters | 201 | Aer | X | X | X |
| HgP_ant | Particulate mercury from Antarctic subsurface waters | 201 | Aer | X | X | X |
| HgP_ocn | Particulate mercury from Indo-Pacific subsurface waters | 201 | Aer | X | X | X |
| HgP_str | Particulate mercury from Stratospheric | 201 | Aer | X | X | |
--Melissa Sulprizio (talk) 20:44, 21 November 2016 (UTC)
POPs
The following table lists the species in the POPs simulation.
| Species | Full name | Molec wt (g/mol) |
Gas or Aer | Advect | Drydep | Wetdep |
|---|---|---|---|---|---|---|
| POPG | Gas-phase POP | 178.23 (PHE) 202.25 (PYR) 252.31 (BaP) |
Gas | X | X | X |
| POPPOCPO | Organic carbon-bound particulate | 178.23 (PHE) 202.25 (PYR) 252.31 (BaP) |
Aer | X | X | X |
| POPPOCPI | Organic carbon-bound particulate | 178.23 (PHE) 202.25 (PYR) 252.31 (BaP) |
Aer | X | X | X |
| POPPBCPO | Black carbon-bound particulate | 178.23 (PHE) 202.25 (PYR) 252.31 (BaP) |
Aer | X | X | X |
| POPPBCPI | Black carbon-bound particulate | 178.23 (PHE) 202.25 (PYR) 252.31 (BaP) |
Aer | X | X | X |
--Melissa Sulprizio (talk) 20:51, 21 November 2016 (UTC)
TransportTracers
The list of species for the transport tracers simulation has now been moved to our Transport Working Group wiki page.
--Bob Yantosca (talk) 15:15, 8 May 2020 (UTC)
Tagged CO
The following table lists the species in the Tagged CO simulation.
| Species | Full name | Molec wt (g/mol) |
Gas or Aer | Advect | Drydep | Wetdep |
|---|---|---|---|---|---|---|
| CO | Total carbon monoxide | 28 | Gas | X | ||
| COus | CO from US fossil fuel emissions | 28 | Gas | X | ||
| COeur | CO from European fossil fuel emissions | 28 | Gas | X | ||
| COasia | CO from Asian fossil fuel emissions | 28 | Gas | X | ||
| COoth | CO from other fossil fuel emissions (rest of world) | 28 | Gas | X | ||
| CObbAm | CO from South American biomass burning emissions | 28 | Gas | X | ||
| CObbAf | CO from African biomass burning emissions | 28 | Gas | X | ||
| CObbAs | CO from SE Asian biomass burning emissions | 28 | Gas | X | ||
| CObbOc | CO from Oceania biomass burning emissions | 28 | Gas | X | ||
| CObbEu | CO from European biomass burning emissions | 28 | Gas | X | ||
| CObbNA | CO from North American biomass burning emissions | 28 | Gas | X | ||
| COch4 | CO chemically produced from CH4 oxidation | 28 | Gas | X | ||
| CObiof | CO from biofuel burning emissions (whole world) | 28 | Gas | X | ||
| COisop | CO chemically produced from isoprene oxidation | 28 | Gas | X | ||
| COmono | CO chemically produced from monoterpene oxidation | 28 | Gas | X | ||
| COmeoh | CO chemically produced from methanol oxidation | 28 | Gas | X | ||
| COacet | CO chemically produced from acetone oxidation | 28 | Gas | X |
--Melissa Sulprizio (talk) 22:38, 17 November 2016 (UTC)
Tagged O3
The following table lists the species in the Tagged O3 simulation.
| Species | Full name | Molec wt (g/mol) |
Gas or Aer | Advect | Drydep | Wetdep |
|---|---|---|---|---|---|---|
| O3 | Total ozone | 46 | Gas | X | X | |
| O3Strt | O3 produced in the stratosphere | 46 | Gas | X | X | |
| You may add the following optional species: | ||||||
| O3UT | O3 produced in the upper troposphere (above 350 hPa) | 46 | Gas | X | X | |
| O3MT | O3 produced in the middle troposphere (PBL top - 350 hPa) | 46 | Gas | X | X | |
| O3ROW | O3 produced in the rest of the world | 46 | Gas | X | X | |
| O3PcBL | O3 produced in the Pacific Ocean boundary layer | 46 | Gas | X | X | |
| O3NABL | O3 produced in the North American boundary layer | 46 | Gas | X | X | |
| O3AtBL | O3 produced in the Atlantic Ocean boundary layer | 46 | Gas | X | X | |
| O3EuBL | O3 produced in the European boundary layer | 46 | Gas | X | X | |
| O3AfBL | O3 produced in the African boundary layer | 46 | Gas | X | X | |
| O3AsBl | O3 produced in the Asian boundary layer | 46 | Gas | X | X | |
| O3Init | O3 from the initial condition | 46 | Gas | X | X | |
| O3USA | O3 produced over the United States (surface - tropopause) | 46 | Gas | X | X | |
--Melissa Sulprizio (talk) 21:08, 21 November 2016 (UTC)
TOMAS aerosol microphysics
There are currently 4 options for TOMAS aerosol microphysics simulations:
| Option | Description | Compile with |
|---|---|---|
| TOMAS12 | Uses 12 size bins (nn = 12) | TOMAS12=y |
| TOMAS15 | Uses 15 size bins (nn = 15) | TOMAS15=y |
| TOMAS30 | Uses 30 size bins (nn = 30) | TOMAS30=y |
| TOMAS40 | Uses 40 size bins (nn = 40) | TOMAS40=y |
TOMAS aerosol microphysics simulations carry the same species as the Tropchem simulation, plus the additional size-resolved aerosol species:
| Species | Full name | Molec wt (g/mol) |
Gas or Aer | Advect | Drydep | Wetdep |
|---|---|---|---|---|---|---|
| AW{1..nn} | Aerosol water, size bins 1 - nn | 18 | Aer | X | ||
| DUST{1..nn} | Mineral dust, size bins 1 - nn
|
100 | Aer | X | X | |
| ECIL{1..nn} | Hydrophilic elemental carbon, size bins 1 - nn | 12 | Aer | X | X | |
| ECOB{1..nn} | Hydrophobic elemental carbon, size bins 1 - nn | 12 | Aer | X | ||
| H2SO4 | Sulfuric acid | 98 | Gas[1] | X | X | X |
| NK{1..nn} | Aerosol number, size bins 1 - nn | 1 | Aer | X | X | X |
| OCIL{1..nn} | Hydrophilic organic carbon, size bins 1 - nn | 12 | Aer | X | X | |
| OCOB{1..nn} | Hydrophobic organic carbon, size bins 1 - nn | 12 | Aer | X | X | |
| SF{1..nn} | Sulfate aerosol, size bins 1 - nn | 96 | Aer | X | X | |
| SS{1..nn} | Sea salt aerosol, size bins 1 - nn | 58.5 | Aer | X | X |
NOTES:
- The TOMAS H2SO4 species dry-deposits like a gas, but wet-deposits like an aerosol. Therefore, we need to give H2SO4 both gas-phase and aerosol parameters in the GEOS-Chem species database.
--Bob Yantosca (talk) 22:02, 13 December 2016 (UTC)
Passive species
Starting in GEOS-Chem v11-01, it is possible to add one or more passive species to any simulation type. For more information, see this wiki post on adding passive species.
--Melissa Sulprizio (talk) 21:06, 21 March 2017 (UTC)
