Difference between revisions of "Main Page"

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<th colspan="2" height="80" valign="middle"><p><font color="#FFFFFF" size="+3">GEOS&#150;Chem Wiki</font></p></th>
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<blockquote><p align="justify">The [http://acmg.seas.harvard.edu/geos/ GEOS–Chem model] is a global 3-D model of atmospheric composition driven by assimilated meteorological observations from the Goddard Earth Observing System (GEOS) of the [http://gmao.gsfc.nasa.gov/ NASA Global Modeling and Assimilation Office]. It is applied by [http://acmg.seas.harvard.edu/geos/geos_people.html research groups around the world] to a wide range of atmospheric composition problems, Central management and support of the model is provided by the [http://acmg.seas.harvard.edu/index.html Atmospheric Chemistry Modeling Group at Harvard University.]</p></blockquote>
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|<p><font color="#FFFFFF" size="+3">'''GEOS&#150;Chem Wiki'''</font></p>
  
<blockquote><p align="justify">This wiki is meant to facilitate communication between GEOS-Chem users and developers. If this is '''your first time here''', check out [[Features of the GEOS-Chem public wiki|the features page]]. If you would like to contribute to the wiki, please register as a user by clicking ''create account'' at the top right corner of this page.</p></blockquote>
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<blockquote><p align="justify">New information is continually being added to the wiki, so please check back here often, or even better, [[Features_of_the_GEOS-Chem_public_wiki#Let_the_GEOS-Chem_wiki_inform_you_of_recent_changes.21|subscribe to the recent changes' RSS feed]]: you will not miss a discussion!</p></blockquote>
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<blockquote>
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The [http://acmg.seas.harvard.edu/geos/ GEOS–Chem model] is a global 3-D model of atmospheric composition driven by assimilated meteorological observations from the Goddard Earth Observing System (GEOS) of the [http://gmao.gsfc.nasa.gov/ NASA Global Modeling and Assimilation Office]. It is applied by [http://acmg.seas.harvard.edu/geos/geos_people.html research groups around the world] to a wide range of atmospheric composition problems, Central management and support of the model is provided by the [http://acmg.seas.harvard.edu/index.html Atmospheric Chemistry Modeling Group at Harvard University.]
  <td bgcolor="#CCFFFF"><p align="center"><big><strong>Current public release:</strong></big></p></td>
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  <td bgcolor="#CCFFFF"><p align="center"><big><strong>[[GEOS-Chem v10-01]]</strong></big></p></td>
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  <td bgcolor="#CCFFFF"><p align="center"><big><strong>[[GEOS-Chem v10-01 benchmark history|v10-01 benchmark history]]</strong></big></p></td>
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</tr>
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<tr>
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  <td width="300px"><p align="center"><big><strong>Version in development:</strong></big></p></td>
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  <td width="250px"><p align="center"><big><strong>[[GEOS-Chem v11-01]]</strong></big></p></td>
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  <td width="250px"><p align="center"><big><strong>[[GEOS-Chem v11-01 benchmark history|v11-01 benchmark history]]</strong></big></p></td>
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</tr>
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<tr>
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  <td><p align="center"><big><strong>Version for high-performance computing (HPC) environments:</strong></big></p></td>
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  <td><p align="center"><big><strong>[[GEOS-Chem HP]]</strong></big>
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</p></td>
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  <td>&nbsp;</td>
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<tr>
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<tr>
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  <td><p align="center"><big><strong>Supported meteorological fields:</strong></big></p></td>
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  <td><p align="center"><big><strong>[[Overview_of_GMAO_met_data_products#GMAO_met_field_comparison_chart|Refer to this table]]</strong></big>
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</p></td>
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  <td>&nbsp;</td>
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<tr>
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  <td><p align="center"><big><strong>List of publications:</strong></big></p></td>
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  <td><p align="center"><big><strong>[http://acmg.seas.harvard.edu/geos/geos_pub.html Refer to this page]</strong></big>
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</p></td>
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  <td>&nbsp;</td>
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</tr>
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<tr>
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  <td><p align="center"><big><strong>Info for getting started:</strong></big></p></td>
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  <td><p align="center"><big><strong>[[GEOS-Chem welcome letter for new users]]<br>[[GEOS-Chem basics]]</strong></big>
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</p></td>
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  <td>&nbsp;</td>
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</tr>
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</table>
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</blockquote>
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<!-- ======================================================== -->
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This wiki is meant to facilitate communication between GEOS-Chem users and developers. If this is '''your first time here''', check out [[Features of the GEOS-Chem public wiki|the features page]]. If you would like to contribute to the wiki, please register as a user by clicking ''create account'' at the top right corner of this page.
<!-- ===== GENERAL INFO ABOUT GEOS-CHEM                ===== -->
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<p>&nbsp;</p>
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<table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
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<tr bgcolor="#00AAAA">
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New information is continually being added to the wiki, so please check back here often, or even better, [[Features_of_the_GEOS-Chem_public_wiki#Let_the_GEOS-Chem_wiki_inform_you_of_recent_changes.21|subscribe to the recent changes' RSS feed]]: you will not miss a discussion!
<th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">General information about GEOS&#150;Chem</font></p></th>
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<!-- ===== GENERAL INFO : FIRST ROW                    ===== -->
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<!-- Header title -->
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{|border="1" width="1000px" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center"
<tr bgcolor="#cccccc">
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<th width="50%"scope="col"><big>Introduction and overview</big></th>
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<th width="50%"scope="col"><big>Steering Committee And Working Groups</big></th>
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</tr>
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<tr>
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|width="334px"|'''Getting started w/ GEOS-Chem:'''
 +
|width="333px"|'''[[GEOS-Chem welcome letter for new users|Welcome letter for new users]]'''
 +
|width="333px"|'''[[GEOS-Chem basics]]'''
  
<!-- Introduction & Overview: Links -->
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|-valign="top" bgcolor="#CCFFFF" align="center"
<td width="50%" valign="top">
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|'''Current public release:'''
 +
|'''[[GEOS-Chem v10-01]]'''
 +
|'''[[GEOS-Chem v10-01 benchmark history|v10-01 benchmark history]]'''
 +
 
 +
|-valign="top" align="center"
 +
|'''Version in development:'''
 +
|'''[[GEOS-Chem v11-01]]'''
 +
|'''[[GEOS-Chem v11-01 benchmark history|v11-01 benchmark history]]'''
 +
 
 +
|-valign="top" align="center"
 +
|'''Version for high-performance<br>computing (HPC) environments:'''
 +
|'''[[GEOS-Chem HP]]'''
 +
|'''[[GEOS-Chem HP Dev Kit]]'''
 +
 
 +
|-valign="top" align="center"
 +
|'''List of publications:'''
 +
|'''[http://acmg.seas.harvard.edu/geos/geos_pub.html Refer to this page]'''
 +
|
 +
 
 +
|}
 +
 
 +
<br>
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 +
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 +
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|colspan="2"|<p><font color="#FFFFFF" size="+2">'''General information about GEOS-Chem'''</font></p>
 +
 
 +
|-valign="top" bgcolor="#CCCCCC"
 +
!width="500px"|<big>Introduction and overview</big>
 +
!width="500px"|<big>Steering Committee and working groups</big>
 +
 
 +
|-valign="top"
 +
| <!-- Intro and overview -->
 
* [[GEOS-Chem welcome letter for new users]]
 
* [[GEOS-Chem welcome letter for new users]]
 
* [[GEOS-Chem basics]]
 
* [[GEOS-Chem basics]]
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* [http://acmg.seas.harvard.edu/geos/geos_new_developments.html Recommendations for offering co-authorships to GEOS-Chem developers]
 
* [http://acmg.seas.harvard.edu/geos/geos_new_developments.html Recommendations for offering co-authorships to GEOS-Chem developers]
 
* [http://acmg.seas.harvard.edu/geos/geos_dev_history.html GEOS-Chem code development history]
 
* [http://acmg.seas.harvard.edu/geos/geos_dev_history.html GEOS-Chem code development history]
 
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</td>
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<!-- Steering Committee and Working Groups: Links -->
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<td width="50%" valign="top">
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* [http://acmg.seas.harvard.edu/geos/geos_steering_cmte.html GEOS-Chem Steering Committee]
 
* [http://acmg.seas.harvard.edu/geos/geos_steering_cmte.html GEOS-Chem Steering Committee]
 
** [[GEOS-Chem model development priorities]]
 
** [[GEOS-Chem model development priorities]]
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** [[Sources and Sinks Working Group|Sources and Surface Uptake Working Group]]
 
** [[Sources and Sinks Working Group|Sources and Surface Uptake Working Group]]
 
** [[Transport Working Group]]
 
** [[Transport Working Group]]
</td>
 
  
</tr>
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|-valign="top" bgcolor="#CCCCCC"
 +
!width="500px"|<big>Getting started with GEOS-Chem</big>
 +
!width="500px"|<big>General technical information</big>
  
<!-- ======================================================== -->
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|-valign="top"
<!-- ===== GENERAL INFO : SECOND ROW                    ===== -->
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|
<!-- ======================================================== -->
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+
<!-- Header title -->
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<tr bgcolor="#cccccc">
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<th width="50%"scope="col"><big>Getting Started With GEOS-Chem</big></th>
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<th width="50%"scope="col"><big>General Technical Information</big></th>
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</tr>
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+
<tr>
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+
<!-- Getting Started With GEOS-Chem: Links -->
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<td width="50%" valign="top">
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* [[Frequently asked questions about GEOS-Chem]]
 
* [[Frequently asked questions about GEOS-Chem]]
 
* [[Minimum system requirements for GEOS-Chem]]
 
* [[Minimum system requirements for GEOS-Chem]]
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* [[GEOS-Chem programming resources]] (e.g. tutorials, user guides, etc.)
 
* [[GEOS-Chem programming resources]] (e.g. tutorials, user guides, etc.)
 
* [http://acmg.seas.harvard.edu/geos/doc/man/appendix_7.html GEOS-Chem Programming Style Guide]
 
* [http://acmg.seas.harvard.edu/geos/doc/man/appendix_7.html GEOS-Chem Programming Style Guide]
</td>
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|
 
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<!-- General Technical Information: Links -->
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<td width="50%" valign="top">
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* [[Initial conditions for GEOS-Chem]]
 
* [[Initial conditions for GEOS-Chem]]
 
* [[Centralized chemistry time step]]
 
* [[Centralized chemistry time step]]
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* [[Adding tracers to GEOS-Chem|Adding advected tracers and chemical species to GEOS-Chem]]
 
* [[Adding tracers to GEOS-Chem|Adding advected tracers and chemical species to GEOS-Chem]]
 
* [[Adding Passive Tracers|Adding passive (CO-like) tracers to GEOS-Chem]]
 
* [[Adding Passive Tracers|Adding passive (CO-like) tracers to GEOS-Chem]]
</td>
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|}
 
+
</tr>
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</table>
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<br>
<!-- ===== CODE DEVELOPER'S FORUMS: TITLE              ===== -->
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<!-- ======================================================== -->
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<p>&nbsp;</p>
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<table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
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<tr bgcolor="#00AAAA">
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{|border="1" width="1000px" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center"
<th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">GEOS&#150;Chem Code Developers' Forums</font></p></th>
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</tr>
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<!-- ======================================================== -->
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|-height="50" bgcolor="#00AAAA" align="center"
<!-- ===== CODE DEVELOPER'S FORUMS : FIRST ROW          ===== -->
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|colspan="2"|<p><font color="#FFFFFF" size="+2">'''GEOS-Chem Code Developers' Forums'''</font></p>
<!-- ======================================================== -->
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<tr bgcolor="#cccccc">
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<th width="50%"scope="col"><big>Coding</big></th>
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<th width="50%"scope="col"><big>Diagnostics</big></th>
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</tr>
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<tr>
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|-valign="top" bgcolor="#CCCCCC"
 +
!width="500px"|<big>Coding</big>
 +
!width="500px"|<big>Diagnostics</big>
  
<!-- Coding: Links -->
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|-valign="top"
<td width="50%" valign="top">
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| <!-- Coding -->
 
* [[GEOS-Chem versions under development]]
 
* [[GEOS-Chem versions under development]]
 
* [[Bugs and fixes|List of GEOS-Chem bugs and in which version they were resolved]]
 
* [[Bugs and fixes|List of GEOS-Chem bugs and in which version they were resolved]]
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* [[Floating point math issues]]
 
* [[Floating point math issues]]
 
* [[Version control with Git]]
 
* [[Version control with Git]]
</td>
+
| <!-- Diagnostics -->
 
+
<!-- Diagnostics: Links -->
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<td width="50%" valign="top">
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* [http://acmg.seas.harvard.edu/geos/doc/man/appendix_5.html Overview of diagnostics characteristics]
 
* [http://acmg.seas.harvard.edu/geos/doc/man/appendix_5.html Overview of diagnostics characteristics]
 
* [[Diagnostic time step]]
 
* [[Diagnostic time step]]
 
* [[Mass Flux (ND24/25/26)]]
 
* [[Mass Flux (ND24/25/26)]]
 
* [[Additional diagnostics]]
 
* [[Additional diagnostics]]
</td>
 
  
</tr>
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|-valign="top" bgcolor="#CCCCCC"
 +
!width="500px"|<big>Emissions</big>
 +
!width="500px"|<big>Chemistry</big>
  
<!-- ======================================================== -->
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|-valign="top"
<!-- ===== CODE DEVELOPER'S FORUMS : SECOND ROW        ===== -->
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|<!-- Emissions -->
<!-- ======================================================== -->
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+
<!-- Header title -->
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<tr bgcolor="#cccccc">
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<th width="50%"scope="col"><big>Emissions</big></th>
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<th width="50%"scope="col"><big>Chemistry</big></th>
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</tr>
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+
<tr>
+
 
+
<!-- Emissions: Links -->
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<td width="50%" valign="top">
+
 
* [[HEMCO|HEMCO emissions component]]
 
* [[HEMCO|HEMCO emissions component]]
 
* [[HEMCO data directories]]
 
* [[HEMCO data directories]]
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* [[Volcanic SO2 emissions from Aerocom|Volcanic emissions]]
 
* [[Volcanic SO2 emissions from Aerocom|Volcanic emissions]]
 
* [[Historical and Future Emissions|Historical and future emissions]]
 
* [[Historical and Future Emissions|Historical and future emissions]]
</td>
+
|<!-- Chemistry -->
 
+
<!-- Chemistry Links -->
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<td width="50%" valign="top">
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* [[GEOS-Chem chemistry mechanisms]]
 
* [[GEOS-Chem chemistry mechanisms]]
 
* [[GEOS-Chem chemistry mechanisms#Stratospheric chemistry|Stratopsheric chemistry options]]
 
* [[GEOS-Chem chemistry mechanisms#Stratospheric chemistry|Stratopsheric chemistry options]]
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*[[Physical properties of GEOS-Chem species]] <span style="color:red">'''(NEW in [[GEOS-Chem v11-01|v11-01]]!)'''</span>
 
*[[Physical properties of GEOS-Chem species]] <span style="color:red">'''(NEW in [[GEOS-Chem v11-01|v11-01]]!)'''</span>
 
*[[Species_indexing_in_GEOS-Chem|Species and tracer indexing in GEOS-Chem]] <span style="color:red">'''(NEW in [[GEOS-Chem v11-01|v11-01]]!)'''</span>
 
*[[Species_indexing_in_GEOS-Chem|Species and tracer indexing in GEOS-Chem]] <span style="color:red">'''(NEW in [[GEOS-Chem v11-01|v11-01]]!)'''</span>
</tr>
 
  
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<!-- ===== CODE DEVELOPER'S FORUMS : THIRD ROW        ===== -->
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!width="500px"|<big>Dynamics</big>
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!width="500px"|<big>Deposition</big>
  
<!-- Header title -->
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|-valign="top"
<tr bgcolor="#cccccc">
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| <!-- Dynamics -->
<th width="50%"scope="col"><big>Dynamics</big></th>
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<th width="50%"scope="col"><big>Deposition</big></th>
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</tr>
+
 
+
<tr>
+
 
+
<!-- Dynamics: Links -->
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<td width="50%" valign="top">
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* [[Advection scheme TPCORE]]
 
* [[Advection scheme TPCORE]]
 
* [[Boundary layer mixing]]
 
* [[Boundary layer mixing]]
 
* [[Cloud convection]]
 
* [[Cloud convection]]
 
* [[Dynamic tropopause]]
 
* [[Dynamic tropopause]]
</td>
+
| <!-- Deposition -->
 
+
<!-- Deposition: Links -->
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<td width="50%" valign="top">
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* [[Dry deposition]]
 
* [[Dry deposition]]
 
**[[Leaf area indices in GEOS-Chem]]
 
**[[Leaf area indices in GEOS-Chem]]
 
* [[Wet deposition]]
 
* [[Wet deposition]]
</td>
 
  
</tr>
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|-valign="top" bgcolor="#CCCCCC"
 +
!width="500px"|<big>Aerosols</big>
 +
!width="500px"|<big>Met fields</big>
  
<!-- ======================================================== -->
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|-valign="top"
<!-- ===== CODE DEVELOPER'S FORUMS : FOURTH ROW        ===== -->
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| <!-- Aerosols -->
<!-- ======================================================== -->
+
 
+
<!-- Header title -->
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<tr bgcolor="#cccccc">
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<th width="50%"scope="col"><big>Aerosols</big></th>
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<th width="50%"scope="col"><big>Met Fields</big></th>
+
</tr>
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+
<tr>
+
 
+
<!-- Aerosols: Links -->
+
<td width="50%" valign="top">
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* [[Aerosols overview: projects and developments|Aerosols working group]]
 
* [[Aerosols overview: projects and developments|Aerosols working group]]
 
* [[Aerosol-only simulation]]
 
* [[Aerosol-only simulation]]
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** [[APM aerosol microphysics|APM]]
 
** [[APM aerosol microphysics|APM]]
 
** [[TOMAS aerosol microphysics|TOMAS]]
 
** [[TOMAS aerosol microphysics|TOMAS]]
</td>
+
| <!-- Met fields -->
 
+
<!-- Met Fields: Links -->
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<td width="50%" valign="top">
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* [[GCAP]]  
 
* [[GCAP]]  
 
** [[List of GCAP met fields|List of GCAP met fields used by GEOS-Chem]]
 
** [[List of GCAP met fields|List of GCAP met fields used by GEOS-Chem]]
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* [[Available met data for nested grid simulations]]
 
* [[Available met data for nested grid simulations]]
 
* [[List of reprocessed met fields]]
 
* [[List of reprocessed met fields]]
</td>
 
  
</tr>
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|-valign="top" bgcolor="#CCCCCC"
 +
!width="500px"|<big>Nested grid simulations</big>
 +
!width="500px"|<big>Earth System Modeling Framework</big>
  
<!-- ======================================================== -->
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|-valign="top"
<!-- ===== CODE DEVELOPER'S FORUMS : FIFTH ROW          ===== -->
+
| <!-- Nested grid -->
<!-- ======================================================== -->
+
<tr bgcolor="#cccccc">
+
<th width="50%"scope="col"><big>Nested Grid Simulations</big></th>
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<th width="50%"scope="col"><big>Earth System Model Framework</big></th>
+
</tr>
+
 
+
<tr>
+
 
+
<!-- Nested Grid Simulations: Links -->
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<td width="50%" valign="top">
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* [[GEOS-Chem nested grid simulations]]
 
* [[GEOS-Chem nested grid simulations]]
 
* [[Setting up GEOS-Chem nested grid simulations]]
 
* [[Setting up GEOS-Chem nested grid simulations]]
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* [[Steps to setup new nested domains]]
 
* [[Steps to setup new nested domains]]
 
* [[GEOS-Chem nested model publications]]
 
* [[GEOS-Chem nested model publications]]
</td>
+
| <!-- ESMF -->
 
+
<!-- Libraries -->
+
<td width="50%" valign="top">
+
 
* [[Installing ESMF and other required libraries]]
 
* [[Installing ESMF and other required libraries]]
 
* [[Code development with the Earth System Model Framework]]
 
* [[Code development with the Earth System Model Framework]]
 
* [[Automatic documentation with protex|Generating automatic LaTeX documentation with protex]]
 
* [[Automatic documentation with protex|Generating automatic LaTeX documentation with protex]]
 
** [http://frodo.elon.edu/tutorial/tutorial/tutorial.html Web-based LaTeX tutorial]
 
** [http://frodo.elon.edu/tutorial/tutorial/tutorial.html Web-based LaTeX tutorial]
</td>
 
  
</tr>
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|-valign="top" bgcolor="#CCCCCC"
 +
!width="500px"|<big>Benchmarking and Evaluation</big>
 +
!width="500px"|<big>Related projects</big>
  
<!-- ======================================================== -->
+
|-valign="top"
<!-- ===== CODE DEVELOPER'S FORUMS : SIXTH ROW          ===== -->
+
| <!-- Benchmarks -->
<!-- ======================================================== -->
+
<tr bgcolor="#cccccc">
+
<th width="50%"scope="col"><big>Benchmarking and Evaluation</big></th>
+
<th width="50%"scope="col"><big>Related Projects</big></th>
+
</tr>
+
 
+
<tr>
+
 
+
<!-- Diagnostics: Links -->
+
<td width="50%" valign="top">
+
 
* [http://acmg.seas.harvard.edu/geos/geos_benchmark.html General info about GEOS-Chem benchmark simulations]
 
* [http://acmg.seas.harvard.edu/geos/geos_benchmark.html General info about GEOS-Chem benchmark simulations]
 
* [http://acmg.seas.harvard.edu/geos/geos_1yr_plots.html List of GEOS-Chem 1-year benchmark simulations]
 
* [http://acmg.seas.harvard.edu/geos/geos_1yr_plots.html List of GEOS-Chem 1-year benchmark simulations]
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* [[GEOS-Chem participation in community intercomparisons]]
 
* [[GEOS-Chem participation in community intercomparisons]]
 
* [[Satellite_Specifications_Table|Satellite Instrument Specifications Table]]
 
* [[Satellite_Specifications_Table|Satellite Instrument Specifications Table]]
</td>
+
| <!-- Projects -->
 
+
<!-- Related Projects: Links -->
+
<td width="50%" valign="top">
+
 
* [[Grid-independent GEOS-Chem]]
 
* [[Grid-independent GEOS-Chem]]
 
* [[GEOS-Chem Adjoint]]
 
* [[GEOS-Chem Adjoint]]
 
* [[GEOS-Chem Near-Real-Time Simulations]]
 
* [[GEOS-Chem Near-Real-Time Simulations]]
 
* [[FlexAOD]]
 
* [[FlexAOD]]
</td>
+
|}
  
</tr>
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<br>
</table>
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<!-- ======================================================== -->
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{|border="1" width="1000px" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center"
<!-- ===== REFERENCE: TITLE                            ===== -->
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<!-- ======================================================== -->
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<p>&nbsp;</p>
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<table width="100%" border="1" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center">
+
  
<tr bgcolor="#00AAAA">
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|-height="50" bgcolor="#00AAAA" align="center"
<th colspan="2" height="50" valign="middle"><p><font color="#FFFFFF" size="+2">Reference Section</font></p></th>
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|colspan="2"|<p><font color="#FFFFFF" size="+2">'''Reference Section'''</font></p>
</tr>
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<!-- ======================================================== -->
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|-valign="top" bgcolor="#CCCCCC"
<!-- ===== REFERENCE: FIRST ROW                        ===== -->
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!width="500px"|<big>IDL</big>
<!-- ======================================================== -->
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!width="500px"|<big>GAMAP</big>
<tr bgcolor="#cccccc">
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<th width="50%"scope="col"><big>IDL</big></th>
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<th width="50%"scope="col"><big>GAMAP</big></th>
+
</tr>
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<tr>
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|-valign="top"
 
+
| <!-- IDL -->
<!-- IDL: Links -->
+
<td width="50%" valign="top">
+
 
* [http://www.exelisvis.com/ Exelis Visual Information Solutions (vendor)]  
 
* [http://www.exelisvis.com/ Exelis Visual Information Solutions (vendor)]  
 
* [http://www.exelisvis.com/docs/routines-1.html Online IDL Reference Manual @ Exelis website]
 
* [http://www.exelisvis.com/docs/routines-1.html Online IDL Reference Manual @ Exelis website]
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* [http://cimss.ssec.wisc.edu/~gumley/doc/idltips.pdf The Underground Guide to IDL by Liam Gumley (PDF)]
 
* [http://cimss.ssec.wisc.edu/~gumley/doc/idltips.pdf The Underground Guide to IDL by Liam Gumley (PDF)]
 
* [[Reading binary files in IDL]]
 
* [[Reading binary files in IDL]]
</td>
+
| <!-- GAMAP -->
 
+
<!-- Diagnostics: Links -->
+
<td width="50%" valign="top">
+
 
* [http://acmg.seas.harvard.edu/gamap/ GAMAP web page]
 
* [http://acmg.seas.harvard.edu/gamap/ GAMAP web page]
 
* [http://acmg.seas.harvard.edu/gamap/doc/ GAMAP on-line users' guide]
 
* [http://acmg.seas.harvard.edu/gamap/doc/ GAMAP on-line users' guide]
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**[[Date and time computations with GAMAP]]
 
**[[Date and time computations with GAMAP]]
 
**[[Text manipulation with GAMAP]]
 
**[[Text manipulation with GAMAP]]
</td>
 
  
</tr>
+
|-valign="top" bgcolor="#CCCCCC"
 +
!width="500px"|<big>Fortran</big>
 +
!width="500px"|<big>Perl</big>
  
<!-- ======================================================== -->
+
|-valign="top"
<!-- ===== REFERENCE: SECOND ROW                        ===== -->
+
|<!-- Fortran -->
<!-- ======================================================== -->
+
 
+
<!-- Header title -->
+
<tr bgcolor="#cccccc">
+
<th width="50%"scope="col"><big>Fortran</big></th>
+
<th width="50%"scope="col"><big>Perl</big></th>
+
</tr>
+
 
+
<tr>
+
 
+
<!-- Fortran: Links -->
+
<td width="50%" valign="top">
+
 
* [[Intel Fortran Compiler]]
 
* [[Intel Fortran Compiler]]
 
** [http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/main_for_lin_v11.pdf Version 11.1]
 
** [http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/main_for_lin_v11.pdf Version 11.1]
Line 475: Line 336:
 
* [http://www.kcl.ac.uk/kis/support/cc/fortran/f90home.html#1.0 Fortran 90 Home Page at King's College, London]
 
* [http://www.kcl.ac.uk/kis/support/cc/fortran/f90home.html#1.0 Fortran 90 Home Page at King's College, London]
 
* [http://www.cs.rpi.edu/~szymansk/oof90.html Object Oriented Fortran 90 Programming]
 
* [http://www.cs.rpi.edu/~szymansk/oof90.html Object Oriented Fortran 90 Programming]
</td>
+
|<!-- Perl -->
 
+
<!-- Perl: Links  -->
+
<td width="50%" valign="top">
+
 
* [http://www.perl.com Perl.com]
 
* [http://www.perl.com Perl.com]
 
* [http://www.perl.org/books/beginning-perl/ ''Beginning Perl'' by Simon Cozens (free online book)]
 
* [http://www.perl.org/books/beginning-perl/ ''Beginning Perl'' by Simon Cozens (free online book)]
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* [http://www.enginsite.com/Library-Robert%27s-Perl-Tutorial.htm MediaWiki User's Guide]
 
* [http://www.enginsite.com/Library-Robert%27s-Perl-Tutorial.htm MediaWiki User's Guide]
 
* [http://www.cpan.org/ Comprehensive Perl Archive Network (CPAN.org)]
 
* [http://www.cpan.org/ Comprehensive Perl Archive Network (CPAN.org)]
</td>
 
  
</tr>
+
|-valign="top" bgcolor="#CCCCCC"
 +
!width="500px"|<big>R</big>
 +
!width="500px"|<big>Python</big>
  
<!-- Header title -->
+
|-valign="top"
<tr bgcolor="#cccccc">
+
|<!-- R -->
<th width="50%"scope="col"><big>R</big></th>
+
<th width="50%"scope="col"><big>Python</big></th>
+
</tr>
+
 
+
<tr>
+
 
+
<!-- R: links -->
+
<td width="50%" valign="top">
+
 
*[http://www.r-project.org/ The R project for statistical computing]
 
*[http://www.r-project.org/ The R project for statistical computing]
 
*[http://journal.r-project.org/ The R journal]
 
*[http://journal.r-project.org/ The R journal]
 
*[http://www.mayin.org/ajayshah/KB/R/index.html R by example]
 
*[http://www.mayin.org/ajayshah/KB/R/index.html R by example]
 
*[[Using R to analyze GEOS-Chem data]]
 
*[[Using R to analyze GEOS-Chem data]]
</td>
+
|<!-- Python -->
 
+
<!-- Python: links -->
+
<td width="50%" valign="top">
+
 
*[[Python code for GEOS-Chem]]
 
*[[Python code for GEOS-Chem]]
 
*[http://www.python.org Python.org]: Main site for all things Python
 
*[http://www.python.org Python.org]: Main site for all things Python
Line 511: Line 359:
 
*[http://wiki.python.org/moin/BeginnersGuide/Programmers PythonWiki.org: List of tutorials and resources]
 
*[http://wiki.python.org/moin/BeginnersGuide/Programmers PythonWiki.org: List of tutorials and resources]
 
*[https://developers.google.com/edu/python/ Google's Python tutorial]
 
*[https://developers.google.com/edu/python/ Google's Python tutorial]
</td>
 
  
</tr>
+
|-valign="top" bgcolor="#CCCCCC"
 +
!width="500px"|<big>NCAR Command Language (NCL)</big>
 +
!width="500px"|<big>Wiki documentation</big>
  
<!-- Header title -->
+
|-valign="top"
<tr bgcolor="#cccccc">
+
|<!-- MCL -->
<th width="50%"scope="col"><big>NCAR Command Language (NCL)</big></th>
+
<th width="50%"scope="col"><big>Wiki Documentation</big></th>
+
</tr>
+
 
+
<tr>
+
 
+
<!-- Wiki Documentation: Links -->
+
<td width="50%" valign="top">
+
 
* [http://www.ncl.ucar.edu/ NCL main page]
 
* [http://www.ncl.ucar.edu/ NCL main page]
 
* [http://www.ncl.ucar.edu/Applications/ NCL applications]
 
* [http://www.ncl.ucar.edu/Applications/ NCL applications]
Line 530: Line 371:
 
* [http://www.ncl.ucar.edu/Support/email_lists.shtml Sign up for NCL-Talk email list]
 
* [http://www.ncl.ucar.edu/Support/email_lists.shtml Sign up for NCL-Talk email list]
 
* [[NCL_tools_for_GEOS-Chem|NCL4GC: NCL tools for GEOS-Chem]]
 
* [[NCL_tools_for_GEOS-Chem|NCL4GC: NCL tools for GEOS-Chem]]
</td>
+
|<!-- Wiki doc -->
<td width="50%" valign="top">
+
 
* [[Sandbox]]
 
* [[Sandbox]]
 
* [http://www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
 
* [http://www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
Line 539: Line 379:
 
* [http://www.mediawiki.org/wiki/Manual:Configuration_settings Configuration Settings list]
 
* [http://www.mediawiki.org/wiki/Manual:Configuration_settings Configuration Settings list]
 
* [http://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
 
* [http://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
</td>
+
|}
 
+
</tr>
+
 
+
</table>
+

Revision as of 18:21, 4 November 2016

GEOS–Chem Wiki

The GEOS–Chem model is a global 3-D model of atmospheric composition driven by assimilated meteorological observations from the Goddard Earth Observing System (GEOS) of the NASA Global Modeling and Assimilation Office. It is applied by research groups around the world to a wide range of atmospheric composition problems, Central management and support of the model is provided by the Atmospheric Chemistry Modeling Group at Harvard University.

This wiki is meant to facilitate communication between GEOS-Chem users and developers. If this is your first time here, check out the features page. If you would like to contribute to the wiki, please register as a user by clicking create account at the top right corner of this page.

New information is continually being added to the wiki, so please check back here often, or even better, subscribe to the recent changes' RSS feed: you will not miss a discussion!

Getting started w/ GEOS-Chem: Welcome letter for new users GEOS-Chem basics
Current public release: GEOS-Chem v10-01 v10-01 benchmark history
Version in development: GEOS-Chem v11-01 v11-01 benchmark history
Version for high-performance
computing (HPC) environments:
GEOS-Chem HP GEOS-Chem HP Dev Kit
List of publications: Refer to this page


General information about GEOS-Chem

Introduction and overview Steering Committee and working groups
Getting started with GEOS-Chem General technical information


GEOS-Chem Code Developers' Forums

Coding Diagnostics
Emissions Chemistry
Dynamics Deposition
Aerosols Met fields
Nested grid simulations Earth System Modeling Framework
Benchmarking and Evaluation Related projects


Reference Section

IDL GAMAP
Fortran Perl
R Python
NCAR Command Language (NCL) Wiki documentation