Difference between revisions of "Main Page"

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{|border="0" width="1000px" bordercolor="#FFFFFF" cellspacing="0" cellpadding="5"
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|-
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|
 +
----
 +
----
 +
<big><strong>GEOS-Chem v11-02-final</strong> '''will also carry the designation''' <strong>GEOS-Chem 12.0.0</strong>'''.'''  We are migrating to a purely numeric versioning system in order to adhere more closely to software development best practices. For a complete description of the new versioning system, please see [[GEOS-Chem version numbering system|our ''GEOS-Chem version numbering system'' wiki page]].</big>
 +
----
 +
----
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 +
 
 +
|}
  
 +
{|border="1" width="1000px" bordercolor="#000000" cellspacing="0" cellpadding="5"
 
|-valign="top" align="center"
 
|-valign="top" align="center"
 
|width="334px"|'''Getting started w/ GEOS-Chem:'''
 
|width="334px"|'''Getting started w/ GEOS-Chem:'''
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|width="333px"|'''[[GEOS-Chem basics]]'''
 
|width="333px"|'''[[GEOS-Chem basics]]'''
  
|-valign="top" bgcolor="#CCFFFF" align="center"
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|-valign="top" align="center" bgcolor="#CCFFFF"
|'''Current public release:'''
+
|'''Current stable version:'''
|'''[[GEOS-Chem v10-01]]'''
+
|'''[[GEOS-Chem 12#12.0.1|GEOS-Chem 12.0.1]]'''<br>[https://doi.org/10.5281/zenodo.1403144 (DOI: 10.5281/zenodo.1403144)]
|'''[[GEOS-Chem v10-01 benchmark history|v10-01 benchmark history]]'''
+
|'''[[GEOS-Chem 12 benchmark history|GEOS-Chem 12 benchmark history]]'''
 
+
|-valign="top" align="center"
+
|'''Version in development:'''
+
|'''[[GEOS-Chem v11-01]]'''
+
|'''[[GEOS-Chem v11-01 benchmark history|v11-01 benchmark history]]'''
+
  
 
|-valign="top" align="center"
 
|-valign="top" align="center"
 
|'''Version for HPC environments:'''
 
|'''Version for HPC environments:'''
 
|'''[[GEOS-Chem HP]]'''
 
|'''[[GEOS-Chem HP]]'''
|'''[[GEOS-Chem HP Dev Kit]]'''
+
|'''[[GEOS-Chem HP Status]]'''
 +
 
 +
|-valign="top" align="center"
 +
|'''Cloud computing documentation:'''
 +
|'''[https://cloud-gc.readthedocs.io/ GEOS-Chem on the Amazon EC2 cloud] '''
 +
|
  
 
|-valign="top" align="center"
 
|-valign="top" align="center"
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|'''[http://acmg.seas.harvard.edu/geos/geos_pub.html Refer to this page]'''
 
|'''[http://acmg.seas.harvard.edu/geos/geos_pub.html Refer to this page]'''
 
|  
 
|  
 +
 +
|-valign="top" align="center"
 +
|'''GEOS-Chem public license:'''
 +
|'''[[Media:LICENSE.txt|License agreement document]]'''
 +
|'''[[Media:AUTHORS.txt|List of developers]]'''
  
 
|}
 
|}
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<br>
 
<br>
  
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|-valign="top" bgcolor="#CCCCCC"
 
|-valign="top" bgcolor="#CCCCCC"
!width="1000px" colspan="2"|<big>Introduction to GEOS-Chem and its user community</big>
+
!width="1000px" colspan="2"|<big>Introduction to GEOS-Chem and the International GEOS-Chem User Community</big>
  
 
|-valign="top"
 
|-valign="top"
 
|width="500px"| <!-- Intro and overview -->
 
|width="500px"| <!-- Intro and overview -->
* [http://acmg.seas.harvard.edu/geos/geos_overview.html Overview of GEOS-Chem and its user community]
+
*[http://acmg.seas.harvard.edu/geos/geos_overview.html Overview of GEOS-Chem and its user community]
** [http://acmg.seas.harvard.edu/geos/geos_people.html GEOS-Chem People & Projects]
+
**[http://acmg.seas.harvard.edu/geos/geos_people.html GEOS-Chem People & Projects]
 
** [[GEOS-Chem Support Team]]
 
** [[GEOS-Chem Support Team]]
 
** [[GEOS-Chem newsletters]]
 
** [[GEOS-Chem newsletters]]
 
** [http://acmg.seas.harvard.edu/geos/geos_new_developments.html Recommendations for offering co-authorships to GEOS-Chem developers]
 
** [http://acmg.seas.harvard.edu/geos/geos_new_developments.html Recommendations for offering co-authorships to GEOS-Chem developers]
** [http://acmg.seas.harvard.edu/geos/geos_dev_history.html GEOS-Chem code development history]
+
** [[GEOS-Chem_versions_under_development|GEOS-Chem code development history]]
 +
** [http://acmg.seas.harvard.edu/geos/geos_chem_narrative.html Narrative description of GEOS-Chem]
 
* [[GEOS-Chem basics|Basic information about getting set up with GEOS-Chem]]
 
* [[GEOS-Chem basics|Basic information about getting set up with GEOS-Chem]]
 
** [[GEOS-Chem welcome letter for new users]]
 
** [[GEOS-Chem welcome letter for new users]]
** [http://acmg.seas.harvard.edu/geos/word_pdf_docs/resources_guidelines_tips.pdf User Resources, Code Development Guidelines, and Debugging Tips]
 
 
** [[Features of the GEOS-Chem public wiki]]
 
** [[Features of the GEOS-Chem public wiki]]
 
** [[Customizing your GEOS-Chem Wiki Settings]]
 
** [[Customizing your GEOS-Chem Wiki Settings]]
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** [[Aerosols Working Group]]
 
** [[Aerosols Working Group]]
 
** [[Carbon Cycle Working Group]]
 
** [[Carbon Cycle Working Group]]
** [[Chemistry-Climate Working Group]]
+
** [[Chemistry-Ecosystems-Climate Working Group]]
 
** [[GEOS-Chem High Performance Working Group]]
 
** [[GEOS-Chem High Performance Working Group]]
 
** [[Hg and POPs Working Group]]
 
** [[Hg and POPs Working Group]]
** [[Organics Working Group]]
+
** [[Chemistry Issues|Chemistry Working Group]]
** [[Chemistry Issues|Oxidants and Chemistry Working Group]]
+
** [[Emissions and Deposition Working Group]]
** [[Nested Model Working Group]]
+
** [[Sources and Surface Uptake Working Group]]
+
 
** [[Transport Working Group]]
 
** [[Transport Working Group]]
 +
** [[GEOS-Chem Nested Model]]
  
 
|-valign="top" bgcolor="#CCCCCC"
 
|-valign="top" bgcolor="#CCCCCC"
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* [[Creating GEOS-Chem run directories]]
 
* [[Creating GEOS-Chem run directories]]
 
* [[GEOS-Chem coding style guide]]
 
* [[GEOS-Chem coding style guide]]
 +
* GEOS-Chem [[GEOS-Chem horizontal grids|horizontal grids]] and [[GEOS-Chem vertical grids|vertical grids]]
 
|
 
|
 
* [[Initial conditions for GEOS-Chem]]
 
* [[Initial conditions for GEOS-Chem]]
* [[Centralized chemistry time step]]
+
* [[Speeding up GEOS-Chem]]
 
* [[GEOS-Chem coding and debugging#GEOS-Chem debugging tips|Tips on how to debug GEOS-Chem effectively]]
 
* [[GEOS-Chem coding and debugging#GEOS-Chem debugging tips|Tips on how to debug GEOS-Chem effectively]]
 
* [[Parallelizing GEOS-Chem]] with the OpenMP directives
 
* [[Parallelizing GEOS-Chem]] with the OpenMP directives
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<br>
 
<br>
  
{|border="1" width="1000px" bordercolor="#000000" cellspacing="0" cellpadding="5" align="center"
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{|border="1" width="1000px" bordercolor="#000000" cellspacing="0" cellpadding="5"
  
 
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|-height="50" bgcolor="#00AAAA" align="center"
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|-valign="top" bgcolor="#CCCCCC"
 
|-valign="top" bgcolor="#CCCCCC"
 
!width="500px"|<big>Coding</big>
 
!width="500px"|<big>Coding</big>
!width="500px"|<big>Diagnostics</big>
+
!width="500px"|<big>Meteorological Fields</big>
  
 
|-valign="top"
 
|-valign="top"
 
| <!-- Coding -->
 
| <!-- Coding -->
* Software development
+
*Software development
** [[GEOS-Chem versions under development]]
+
**[[GEOS-Chem versions]]
** [[Version control with Git]]
+
**[[Version control with Git]]
* [[GEOS-Chem coding and debugging]]
+
*[[GEOS-Chem coding and debugging]]
** [[GEOS-Chem coding style guide]]
+
**[[GEOS-Chem coding style guide]]
** [[Bugs and fixes|List of GEOS-Chem bugs and in which version they were resolved]]
+
**[[Bugs and fixes|List of GEOS-Chem bugs and in which version they were resolved]]
** [[Currently unresolved issues in GEOS-Chem]]
+
**[[Currently unresolved issues in GEOS-Chem]]
** [[Known issues caused by compiler bugs|Known GEOS-Chem issues caused by compiler bugs]]
+
**[[Known issues caused by compiler bugs|Known GEOS-Chem issues caused by compiler bugs]]
** [[Machine issues & portability|Machine issues and portability]]
+
**[[Machine issues & portability|Machine issues and portability]]
** [[Debugging with the GEOS-Chem unit tester]]
+
**[[Debugging with the GEOS-Chem unit tester]]
** [[Common GEOS-Chem error messages]]
+
**[[Performing Difference Tests with GEOS-Chem]]
** [[GEOS-Chem_coding_and_debugging#Reporting_GEOS-Chem_bugs_to_the_GEOS-Chem_Support_Team|Reporting GEOS-Chem bugs to the GCST]]
+
**[[Common GEOS-Chem error messages]]
* [[GEOS-Chem performance]]
+
**[[GEOS-Chem_coding_and_debugging#Reporting_GEOS-Chem_bugs_to_the_GEOS-Chem_Support_Team|Reporting GEOS-Chem bugs to the GCST]]
** [[Profiling GEOS-Chem]]
+
*[[GEOS-Chem performance]]
** [[Passing array arguments efficiently in GEOS-Chem]]
+
**[[Profiling GEOS-Chem]]
** [[Floating point math issues]]
+
**[[Passing array arguments efficiently in GEOS-Chem]]
** [[GEOS-Chem performance#7-day time tests|Results from 7-day timing tests]]
+
**[[Floating point math issues]]
| <!-- Diagnostics -->
+
**[[GEOS-Chem performance#7-day time tests|Results from 7-day timing tests]]
* [[List of diagnostics for v11-01|List of current GEOS-Chem diagnostics]]
+
| <!-- Met fields -->'''Current met field products'''
* [[The HEMCO User's Guide#Diagnostics|Archiving diagnostics from HEMCO to netCDF files]]
+
*[[Overview of GMAO met data products]]
* [[Diagnostic time step]]
+
**[[Version history of GMAO met data products]]
* [[Mass Flux (ND24/25/26)]]
+
**[[Available met data for nested grid simulations]]
* [[Additional diagnostics]]
+
**[[List of reprocessed met fields]]
 +
*[[MERRA-2|GMAO MERRA-2]]
 +
**[[List of MERRA-2 met fields|List of MERRA-2 met fields used by GEOS-Chem]]
 +
**[[MERRA-2 implementation details|Implementing MERRA-2 into GEOS-Chem]]
 +
*[[GEOS-FP|GMAO GEOS-FP]]
 +
**[[List of GEOS-FP met fields|List of GEOS-FP met fields used by GEOS-Chem]]
 +
**[[GEOS-FP implementation details|Implementing GEOS-FP into GEOS-Chem]]
 +
 
 +
'''Obsolete met field products'''
 +
*[[MERRA|GMAO MERRA "reanalysis"]]
 +
**[[List of MERRA met fields|List of MERRA met fields used by GEOS-Chem]]
 +
**[[MERRA implementation details|Implementing MERRA into GEOS-Chem]]
 +
*[[GEOS-5|GMAO GEOS-5.2.0]]
 +
**[[List of GEOS-5 met fields|List of GEOS-5.2.0 met fields used by GEOS-Chem]]
 +
**[[GEOS-5 issues|Issues with GEOS-5.2.0 met data]]
  
 
|-valign="top" bgcolor="#CCCCCC"
 
|-valign="top" bgcolor="#CCCCCC"
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|-valign="top"
 
|-valign="top"
 
|<!-- Emissions -->
 
|<!-- Emissions -->
* [[HEMCO|HEMCO emissions component]]
+
*[[HEMCO|HEMCO emissions component]]
* [[HEMCO data directories]]
+
**[[HEMCO data directories]]
* [[Aerosol emissions]]
+
**[[The HEMCO User's Guide]]
* [[Aircraft emissions]]
+
**[[Implementation of HEMCO in GEOS-Chem]]
* [[Anthropogenic emissions]]
+
*Emissions categories
* [[Scale factors for anthropogenic emissions]]
+
**[[Aerosol emissions]]
* [[Biofuel emissions]]
+
**[[Aircraft emissions]]
* [[Biogenic emissions]]
+
**[[Anthropogenic emissions]]
* [[Biomass burning emissions]]
+
**[[Scale factors for anthropogenic emissions]]
* [[Lightning NOx emissions]]
+
**[[Biofuel emissions]]
* [[Ship emissions]]
+
**[[Biogenic emissions]]
* [[Soil NOx emissions]]
+
**[[Biomass burning emissions]]
* [[Volcanic SO2 emissions from Aerocom|Volcanic emissions]]
+
**[[Lightning NOx emissions]]
* [[Historical and Future Emissions|Historical and future emissions]]
+
**[[Ship emissions]]
 +
**[[Soil NOx emissions]]
 +
**[[Volcanic SO2 emissions from Aerocom|Volcanic emissions]]
 +
**[[Historical and Future Emissions|Historical and future emissions]]
 
|<!-- Chemistry -->
 
|<!-- Chemistry -->
* [[GEOS-Chem chemistry mechanisms]]
+
*[[GEOS-Chem chemistry mechanisms]]
** [[GEOS-Chem chemistry mechanisms#Stratospheric chemistry|Stratopsheric chemistry options]]
+
**[[GEOS-Chem chemistry mechanisms#Stratospheric chemistry|Stratopsheric chemistry options]]
** [[GEOS-Chem chemistry mechanisms#Specialty simulations|Specialty simulations (aka "offline simulations")]]
+
**[[GEOS-Chem chemistry mechanisms#Specialty simulations|Specialty simulations (aka "offline simulations")]]
** [[Photolysis mechanism|Photolysis mechanisms used in GEOS-Chem]]
+
**[[Photolysis mechanism|Photolysis mechanisms used in GEOS-Chem]]
* [[Species in GEOS-Chem]]
+
*[[Species in GEOS-Chem]]
** [[GEOS-Chem species database]]
+
**[[GEOS-Chem species database]]
** [[Physical properties of GEOS-Chem species]]  
+
**[[Physical properties of GEOS-Chem species]]  
** [[GEOS-Chem species units]]
+
**[[GEOS-Chem species units]]
** [[Species indexing in GEOS-Chem]]
+
**[[Species indexing in GEOS-Chem]]
* Other resources
+
*Other resources
** [[FlexChem]]
+
**[[FlexChem]]
** [[Chemistry Issues]]
+
**[[Chemistry Issues]]
** [[Process Analysis Diagnostics]]
+
**[[Centralized chemistry time step]]
** [[Linking GEOS-Chem to CMAQ]]
+
**[[Process Analysis Diagnostics]]
** [[Coupling GEOS-Chem with RRTMG]]
+
**[[Linking GEOS-Chem to CMAQ]]
** [[DSMACC chemical box model]]
+
**[[Coupling GEOS-Chem with RRTMG]]
 +
**[[DSMACC chemical box model]]
  
 
|-valign="top" bgcolor="#CCCCCC"
 
|-valign="top" bgcolor="#CCCCCC"
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|-valign="top"
 
|-valign="top"
 
| <!-- Dynamics -->
 
| <!-- Dynamics -->
* [[Advection scheme TPCORE]]
+
*[[Advection scheme TPCORE]]
* [[Boundary layer mixing]]
+
*[[Boundary layer mixing]]
* [[Cloud convection]]
+
*[[Cloud convection]]
* [[Dynamic tropopause]]
+
*[[Dynamic tropopause]]
 
| <!-- Deposition -->
 
| <!-- Deposition -->
* [[Dry deposition]]
+
*[[Dry deposition]]
 
**[[Leaf area indices in GEOS-Chem]]
 
**[[Leaf area indices in GEOS-Chem]]
 
**[[Olson land map]]
 
**[[Olson land map]]
* [[Wet deposition]]
+
*[[Wet deposition]]
  
 
|-valign="top" bgcolor="#CCCCCC"
 
|-valign="top" bgcolor="#CCCCCC"
 
!width="500px"|<big>Aerosols</big>
 
!width="500px"|<big>Aerosols</big>
!width="500px"|<big>Met fields</big>
+
!width="500px"|<big>Benchmarking and Evaluation</big>
  
 
|-valign="top"
 
|-valign="top"
 
| <!-- Aerosols -->
 
| <!-- Aerosols -->
* [[Aerosol-only simulation]]
+
*[[Aerosol-only simulation]]
* [[Aerosol optical properties]]
+
*[[Aerosol optical properties]]
* [[Aerosol thermodynamical equilibrium]]
+
*[[Aerosol thermodynamical equilibrium]]
* [[Carbonaceous aerosols]]
+
*[[Carbonaceous aerosols]]
* [[Mineral dust aerosols]]
+
*[[Mineral dust aerosols]]
* [[Secondary organic aerosols]]
+
*[[Secondary organic aerosols]]
* [[Sea salt aerosols]]
+
*[[Sea salt aerosols]]
* [[Sulfate aerosols]]
+
*[[Sulfate aerosols]]
* Aerosol Microphysics
+
*Aerosol Microphysics
** [[APM aerosol microphysics|APM]]
+
**[[APM aerosol microphysics|APM]]
** [[TOMAS aerosol microphysics|TOMAS]]
+
**[[TOMAS aerosol microphysics|TOMAS]]
| <!-- Met fields -->
+
| <!-- Benchmarks -->
* [[Overview of GMAO met data products]]
+
*[[GEOS-Chem_benchmarking|General info about GEOS-Chem benchmark simulations]]
* [[Version history of GMAO met data products]]
+
**[[GEOS-Chem_versions|List of GEOS-Chem 1-year benchmark simulations]]
* [[MERRA-2|GMAO MERRA-2]]
+
**[[Mean OH concentration]]
** [[List of MERRA-2 met fields|List of MERRA-2 met fields used by GEOS-Chem]]
+
**[[GEOS-Chem_performance#Timing_results_from_1-month_benchmarks|1-month benchmark timing results]]
** [[MERRA-2 implementation details|Implementing MERRA-2 into GEOS-Chem]]
+
**[[GEOS-Chem 12 benchmark history]]
* [[GEOS-FP|GMAO GEOS-FP]]
+
**[[GEOS-Chem participation in community intercomparisons]]
** [[List of GEOS-FP met fields|List of GEOS-FP met fields used by GEOS-Chem]]
+
**[[Satellite_Specifications_Table|Satellite Instrument Specifications Table]]
** [[GEOS-FP implementation details|Implementing GEOS-FP into GEOS-Chem]]
+
* [[MERRA|GMAO MERRA "reanalysis"]]
+
** [[List of MERRA met fields|List of MERRA met fields used by GEOS-Chem]]
+
** [[MERRA implementation details|Implementing MERRA into GEOS-Chem]]
+
* [[GEOS-5|GMAO GEOS-5.2.0]]
+
** [[List of GEOS-5 met fields|List of GEOS-5.2.0 met fields used by GEOS-Chem]]
+
** [[GEOS-5 issues|Issues with GEOS-5.2.0 met data]]
+
* [[GEOS-Chem vertical grids]]
+
* [[Available met data for nested grid simulations]]
+
* [[List of reprocessed met fields]]
+
  
 
|-valign="top" bgcolor="#CCCCCC"
 
|-valign="top" bgcolor="#CCCCCC"
 
!width="500px"|<big>Nested grid simulations</big>
 
!width="500px"|<big>Nested grid simulations</big>
!width="500px"|<big>Earth System Modeling Framework</big>
+
!width="500px"|<big>Diagnostics</big>
  
 
|-valign="top"
 
|-valign="top"
 
| <!-- Nested grid -->
 
| <!-- Nested grid -->
* [[GEOS-Chem nested grid simulations]]
+
*[[GEOS-Chem nested grid simulations]]
* [[Setting up GEOS-Chem nested grid simulations]]
+
*[[Setting up GEOS-Chem nested grid simulations]]
* [[Available met data for nested grid simulations]]
+
*[[Available met data for nested grid simulations]]
* [http://acmg.seas.harvard.edu/geos/wiki_docs/nested_grids/geos_data_downloads.pdf Protocol for nested-grid data downloads]
+
*[http://acmg.seas.harvard.edu/geos/wiki_docs/nested_grids/geos_data_downloads.pdf Protocol for nested-grid data downloads]
* [[Steps to setup new nested domains]]
+
*[[Steps to setup new nested domains]]
* [[GEOS-Chem nested model publications]]
+
*[[GEOS-Chem nested model publications]]
| <!-- ESMF -->
+
| <!-- Diagnostics -->
* [[Installing ESMF and other required libraries]]
+
*Available diagnostics in GEOS-Chem...
* [[Code development with the Earth System Model Framework]]
+
**[[List of diagnostics archived to bpch format|... in binary punch (aka bpch) format]]
* [[Automatic documentation with protex|Generating automatic LaTeX documentation with protex]]
+
**[[List of diagnostics archived to netCDF format|... in netCDF format]]
** [http://frodo.elon.edu/tutorial/tutorial/tutorial.html Web-based LaTeX tutorial]
+
*[[The HEMCO User's Guide#Diagnostics|Archiving diagnostics from HEMCO to netCDF files]]
 +
*[[Diagnostic time step]]
 +
*[[Mass Flux (ND24/25/26)]]
 +
*[[Additional diagnostics]]
  
 
|-valign="top" bgcolor="#CCCCCC"
 
|-valign="top" bgcolor="#CCCCCC"
!width="500px"|<big>Benchmarking and Evaluation</big>
 
 
!width="500px"|<big>Related projects</big>
 
!width="500px"|<big>Related projects</big>
 +
!width="500px"|<big>Other resources</big>
  
 
|-valign="top"
 
|-valign="top"
| <!-- Benchmarks -->
+
|<!-- Projects -->
* [http://acmg.seas.harvard.edu/geos/geos_benchmark.html General info about GEOS-Chem benchmark simulations]
+
*[[GEOS-Chem HP]]
* [http://acmg.seas.harvard.edu/geos/geos_1yr_plots.html List of GEOS-Chem 1-year benchmark simulations]
+
*[[GEOS-Chem Adjoint]]
* [[Mean OH concentration]]
+
*[[GEOS-Chem Near-Real-Time Simulations]]
* [ftp://ftp.as.harvard.edu/gcgrid/geos-chem/1yr_benchmarks/ FTP site with output from 1-year GEOS-Chem benchmark simulations]
+
*[[Coupling GEOS-Chem with other models]]
* [[GEOS-Chem participation in community intercomparisons]]
+
*[[FlexAOD]]
* [[Satellite_Specifications_Table|Satellite Instrument Specifications Table]]
+
*[[ATom Related GEOS-Chem Projects]]
| <!-- Projects -->
+
|<!-- Other resources -->
* [[GEOS-Chem HP]]
+
*[http://www.researcherid.com/rid/C-5595-2014 GEOS-Chem publications page on ResearcherID]
* [[GEOS-Chem Adjoint]]
+
*[http://acmg.seas.harvard.edu/geos/meetings/2018_GCA/presentationsposters.html Presentations from the GCA1 meeting (2018)]
* [[GEOS-Chem Near-Real-Time Simulations]]
+
*[http://acmg.seas.harvard.edu/geos/meetings/2017/presentationsposters.html Presentations from the IGC8 Meeting (2017)]
* [[FlexAOD]]
+
*[http://acmg.seas.harvard.edu/geos/meetings/2015/presentationsposters.html Presentations from the IGC7 meeting (2015)]
 +
*[http://acmg.seas.harvard.edu/geos/meetings/2013/presentations.html Presentations from the IGC6 meeting (2013)]
 
|}
 
|}
  
 
<br>
 
<br>
  
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{|border="1" width="1000px" bordercolor="#000000" cellspacing="0" cellpadding="5"
  
 
|-height="50" bgcolor="#00AAAA" align="center"
 
|-height="50" bgcolor="#00AAAA" align="center"
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|-valign="top"
 
|-valign="top"
 
| <!-- IDL -->
 
| <!-- IDL -->
* [http://www.harrisgeospatial.com/docs/using_idl_home.html Using IDL (Harris Geospatial Solutions site)]
+
*[http://www.harrisgeospatial.com/docs/using_idl_home.html Using IDL (Harris Geospatial Solutions site)]
* [http://idlastro.gsfc.nasa.gov/idl_html_help/Structures.html Structures in IDL]
+
*[http://idlastro.gsfc.nasa.gov/idl_html_help/Structures.html Structures in IDL]
* [http://idlastro.gsfc.nasa.gov/idl_html_help/Pointers.html Pointers in IDL]
+
*[http://idlastro.gsfc.nasa.gov/idl_html_help/Pointers.html Pointers in IDL]
* [http://idlastro.gsfc.nasa.gov/idl_html_help/Overview_of_Mathematics_in_IDL.html Overview of Mathematics in IDL]
+
*[http://idlastro.gsfc.nasa.gov/idl_html_help/Overview_of_Mathematics_in_IDL.html Overview of Mathematics in IDL]
* [http://idlastro.gsfc.nasa.gov/homepage.html IDL Astronomy User's Library]
+
*[http://idlastro.gsfc.nasa.gov/homepage.html IDL Astronomy User's Library]
* [http://fermi.jhuapl.edu/s1r/idl/idl.html JHU/APL/S1R IDL routines page]
+
*[http://fermi.jhuapl.edu/s1r/idl/idl.html JHU/APL/S1R IDL routines page]
* [http://cow.physics.wisc.edu/~craigm/idl/idl.html Craig Markwardt's IDL library]
+
*[http://cow.physics.wisc.edu/~craigm/idl/idl.html Craig Markwardt's IDL library]
* [[Reading binary files in IDL]]
+
*[[Reading binary files in IDL]]
 
| <!-- GAMAP -->
 
| <!-- GAMAP -->
* [http://acmg.seas.harvard.edu/gamap/ GAMAP web page]
+
*[http://acmg.seas.harvard.edu/gamap/ GAMAP web page]
* [http://acmg.seas.harvard.edu/gamap/doc/ GAMAP on-line users' guide]
+
*[http://acmg.seas.harvard.edu/gamap/doc/ GAMAP on-line users' guide]
* [[GAMAP bugs and fixes]]
+
*[[GAMAP bugs and fixes]]
* [[GAMAP tips and tricks]]
+
*[[GAMAP tips and tricks]]
 
**[[General GAMAP usage]]
 
**[[General GAMAP usage]]
 
**[[TVMAP cheat sheet]]
 
**[[TVMAP cheat sheet]]
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***[http://acmg.seas.harvard.edu/gamap/doc/timeseries_brief_tutorial.pdf Working with timeseries output in GAMAP]
 
***[http://acmg.seas.harvard.edu/gamap/doc/timeseries_brief_tutorial.pdf Working with timeseries output in GAMAP]
 
**[[Color and graphics with GAMAP]]
 
**[[Color and graphics with GAMAP]]
*** [http://acmg.seas.harvard.edu/geos/wiki_docs/gamap/gamap_color_table_file.pdf Loading Color Tables in GAMAP v2.12]
+
***[http://acmg.seas.harvard.edu/geos/wiki_docs/gamap/gamap_color_table_file.pdf Loading Color Tables in GAMAP v2.12]
 
*** [http://acmg.seas.harvard.edu/forum_files/cdh_ColorInIDL.pdf Working with color in IDL by Chris Holmes]
 
*** [http://acmg.seas.harvard.edu/forum_files/cdh_ColorInIDL.pdf Working with color in IDL by Chris Holmes]
 
**[[Regridding with GAMAP]]
 
**[[Regridding with GAMAP]]
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|-valign="top"
 
|-valign="top"
 
|<!-- Fortran -->
 
|<!-- Fortran -->
* [[Intel Fortran Compiler]]
+
*[[Intel Fortran Compiler]]
** [http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/main_for_lin_v11.pdf Version 11.1]
+
**[http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/main_for_lin_v11.pdf Version 11.1]
** [http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/main_for_lin_v12.pdf Version 12.1]
+
**[http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/main_for_lin_v12.pdf Version 12.1]
** [https://nf.nci.org.au/facilities/software/intel-ct/13.2.146/Documentation/en_US/compiler_f/main_for/index.htm#GUID-81DC012F-20D6-46B1-A524-BFAC4B6F7747.htm#GUID-81DC012F-20D6-46B1-A524-BFAC4B6F7747 Version XE 13.1]
+
**[https://nf.nci.org.au/facilities/software/intel-ct/13.2.146/Documentation/en_US/compiler_f/main_for/index.htm#GUID-81DC012F-20D6-46B1-A524-BFAC4B6F7747.htm#GUID-81DC012F-20D6-46B1-A524-BFAC4B6F7747 Version XE 13.1]
** [https://software.intel.com/en-us/compiler_15.0_ug_f Version 15.0]
+
**[https://software.intel.com/en-us/compiler_15.0_ug_f Version 15.0]
* [[PGI Fortran compiler]]
+
**[http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/PDF_Fortran_Compiler_UG_17_0.pdf Version 17]
 +
*[[PGI Fortran compiler]]
 
**[http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/pgiug.pdf User Guide]
 
**[http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/pgiug.pdf User Guide]
 
**[http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/pgifortref.pdf Reference Guide]
 
**[http://acmg.seas.harvard.edu/geos/wiki_docs/compilers/pgifortref.pdf Reference Guide]
* [[GNU Fortran compiler]]
+
*[[GNU Fortran compiler]]
 
*[[GEOS-Chem basics#Fortran resources|Fortran tutorials]]
 
*[[GEOS-Chem basics#Fortran resources|Fortran tutorials]]
 
|<!-- Perl -->
 
|<!-- Perl -->
* [http://www.perl.com Perl.com]
+
*[http://www.perl.com Perl.com]
* [http://www.perl.org/books/beginning-perl/ ''Beginning Perl'' by Simon Cozens (free online book)]
+
*[http://www.perl.org/books/beginning-perl/ ''Beginning Perl'' by Simon Cozens (free online book)]
* [http://backpan.perl.org/authors/id/Q/QU/QUONG/perlin20.html Perl in 20 pages]
+
*[http://backpan.perl.org/authors/id/Q/QU/QUONG/perlin20.html Perl in 20 pages]
* [http://www.enginsite.com/Library-Robert%27s-Perl-Tutorial.htm MediaWiki User's Guide]
+
*[http://www.enginsite.com/Library-Robert%27s-Perl-Tutorial.htm MediaWiki User's Guide]
* [http://www.cpan.org/ Comprehensive Perl Archive Network (CPAN.org)]
+
*[http://www.cpan.org/ Comprehensive Perl Archive Network (CPAN.org)]
  
 
|-valign="top" bgcolor="#CCCCCC"
 
|-valign="top" bgcolor="#CCCCCC"
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|-valign="top"
 
|-valign="top"
 
|<!-- NCL -->
 
|<!-- NCL -->
* [http://www.ncl.ucar.edu/ NCL main page]
+
*[http://www.ncl.ucar.edu/ NCL main page]
* [http://www.ncl.ucar.edu/Applications/ NCL applications]
+
*[http://www.ncl.ucar.edu/Applications/ NCL applications]
* [http://www.ncl.ucar.edu/Document/ NCL documentation]
+
*[http://www.ncl.ucar.edu/Document/ NCL documentation]
* [http://www.ncl.ucar.edu/Support/email_lists.shtml Sign up for NCL-Talk email list]
+
*[http://www.ncl.ucar.edu/Support/email_lists.shtml Sign up for NCL-Talk email list]
* [[NCL_tools_for_GEOS-Chem|NCL4GC: NCL tools for GEOS-Chem]]
+
*[[NCL_tools_for_GEOS-Chem|NCL4GC: NCL tools for GEOS-Chem]]
 
|<!-- Wiki doc -->
 
|<!-- Wiki doc -->
* [[Sandbox]]
+
*[[Sandbox]]
* [http://www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
+
*[http://www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
* [http://meta.wikimedia.org/wiki/Help:Contents MediaWiki User's Guide]
+
*[http://meta.wikimedia.org/wiki/Help:Contents MediaWiki User's Guide]
* [http://meta.wikimedia.org/wiki/Help:Wikitext Examples of Wiki markup text]
+
*[http://meta.wikimedia.org/wiki/Help:Wikitext Examples of Wiki markup text]
* [http://meta.wikimedia.org/wiki/Help:Reference_card One-page editing reference card]
+
*[http://meta.wikimedia.org/wiki/Help:Reference_card One-page editing reference card]
* [http://www.mediawiki.org/wiki/Manual:Configuration_settings Configuration Settings list]
+
*[http://www.mediawiki.org/wiki/Manual:Configuration_settings Configuration Settings list]
* [http://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
+
*[http://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
 
|}
 
|}

Revision as of 13:26, 20 September 2018

GEOS–Chem Wiki

GEOS-Chem Community Mission: to advance understanding of human and natural influences on the environment
through a comprehensive, state-of-the-science, readily accessible global model of atmospheric composition.

The GEOS–Chem model is a global 3-D model of atmospheric composition driven by assimilated meteorological observations from the Goddard Earth Observing System (GEOS) of the NASA Global Modeling and Assimilation Office. It is applied by research groups around the world to a wide range of atmospheric composition problems, Central management and support of the model is provided by the Atmospheric Chemistry Modeling Group at Harvard University.

This wiki is meant to facilitate communication between GEOS-Chem users and developers. If this is your first time here, check out the features page. If you would like to contribute to the wiki, please register as a user by clicking create account at the top right corner of this page.

New information is continually being added to the wiki, so please check back here often, or even better, subscribe to the recent changes' RSS feed: you will not miss a discussion!



GEOS-Chem v11-02-final will also carry the designation GEOS-Chem 12.0.0. We are migrating to a purely numeric versioning system in order to adhere more closely to software development best practices. For a complete description of the new versioning system, please see our GEOS-Chem version numbering system wiki page.




Getting started w/ GEOS-Chem: Welcome letter for new users GEOS-Chem basics
Current stable version: GEOS-Chem 12.0.1
(DOI: 10.5281/zenodo.1403144)
GEOS-Chem 12 benchmark history
Version for HPC environments: GEOS-Chem HP GEOS-Chem HP Status
Cloud computing documentation: GEOS-Chem on the Amazon EC2 cloud
List of publications: Refer to this page
GEOS-Chem public license: License agreement document List of developers


General information about GEOS-Chem

Introduction to GEOS-Chem and the International GEOS-Chem User Community
Getting started with GEOS-Chem


GEOS-Chem Code Developers' Forums

Coding Meteorological Fields
Current met field products

Obsolete met field products

Emissions Chemistry
Dynamics Deposition
Aerosols Benchmarking and Evaluation
Nested grid simulations Diagnostics
Related projects Other resources


Reference Section

IDL GAMAP
Fortran Perl
R Python
NCAR Command Language (NCL) Wiki documentation