Difference between revisions of "List of diagnostics for v11-01"

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(ND29: CO sources)
(ND32: NO emissions)
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!width="100px"|Category
 
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|1 ||(I,J,L) ||Aircraft NO ||[molec/cm2/s] ||NO-AC-$  
+
|1 ||(I,J,L) ||NO aircraft emissions ||[molec/cm2/s] ||NO-AC-$  
 
|-
 
|-
|2 ||(I,J) ||Anthropogenic NO ||[molec/cm2/s] ||NO-AN-$  
+
|2 ||(I,J) ||NO anthropogenic emissions (includes ship) ||[molec/cm2/s] ||NO-AN-$  
 
|-
 
|-
|3 ||(I,J) ||Biomass Burning NO ||[molec/cm2/s] ||NO-BIOB  
+
|3 ||(I,J) ||NO biomass burning emissions ||[molec/cm2/s] ||NO-BIOB  
 
|-
 
|-
|4 ||(I,J) ||Biofuel Burning NO ||[molec/cm2/s] ||NO-BIOF  
+
|4 ||(I,J) ||NO biofuel burning emissions ||[molec/cm2/s] ||NO-BIOF  
 
|-
 
|-
|5 ||(I,J) ||Fertilizer NO ||[molec/cm2/s] ||NO-FERT  
+
|5 ||(I,J) ||NO fertilizer emissions ||[molec/cm2/s] ||NO-FERT  
 
|-
 
|-
|6 ||(I,J,L) ||Lightning NO ||[molec/cm2/s] ||NO-LI-$  
+
|6 ||(I,J,L) ||NO lightning emissions||[molec/cm2/s] ||NO-LI-$  
 
|-
 
|-
|7 ||(I,J) ||Soil NO ||[molec/cm2/s] ||NO-SOIL
+
|7 ||(I,J) ||NO soil emissions ||[molec/cm2/s] ||NO-SOIL
 
|}
 
|}
  

Revision as of 21:07, 17 January 2017

On this page we list the various diagnostic quantities that you can archive with GEOS-Chem.

Contents

Overview

Flag Dimension Quantity Units Category

where CATEGORY is the 8-character name used by GAMAP to reference a particular diagnostic field. Information about how to set the different flags in the input.geos file can be found in Chapter 5. DIMENSION is usually 2-D or 3-D, with I,J,L for longitude, latitude and level indices. N as a third or fourth dimension refers to the number of tracers that a diagnostic can carry.

You can specify which diagnostic quantities you want to archive by modifying the various menus of the input.geos file, which is contained in your the GEOS-Chem run directory. The relevant menus of input.geos are:

ND01: Rn-Pb-Be sources

ND01 Dimension RADON 222 - LEAD 210 - BERYLLIUM 7 SOURCE Units Category
1 (I,J,L) 222Rn emissions [kg/s] RN-SRCE
2 (I,J,L) 210Pb emissions [kg/s] RN-SRCE
3 (I,J,L) 7Be emissions [kg/s] RN-SRCE

ND02: Rn-Pb-Be decay

ND02 Dimension RADON 222 - LEAD 210 - BERYLLIUM 7 DECAY Units Category
1 (I,J,L) 222Rn loss [kg/s] RN-DECAY
2 (I,J,L) 210Pb loss [kg/s] RN-DECAY
3 (I,J,L) 7Be loss [kg/s] RN-DECAY

ND03: Mercury emissions and P/L

ND03 Dimension MERCURY EMISSIONS, PRODUCTION, LOSS Units Category
1 (I,J) Anthropogenic Hg0 emission [kg] HG-SRCE
2 (I,J) Total mass of oceanic Hg0 [kg] HG-SRCE
3 (I,J) Oceanic emission of Hg0 [kg] HG-SRCE
4 (I,J) Land reemission of Hg0 [kg] HG-SRCE
5 (I,J) Land natural emission of Hg0 [kg] HG-SRCE
6 (I,J) Anthropogenic Hg2 emission [kg] HG-SRCE
7 (I,J) Total mass of oceanic Hg2 [kg] HG-SRCE
8 (I,J) Mass of Hg2 sunk in the ocean [kg] HG-SRCE
9 (I,J) Anthropogenic HgP emission [kg] HG-SRCE
10 (I,J) Total oceanic mercury [kg] HG-SRCE
11 (I,J) Total mass of oceanic HgP [kg] HG-SRCE
12 (I,J) Mass of organic carbon sunk in ocean [kg] HG-SRCE
13 (I,J) Emissions from biomass burning [kg] HG-SRCE
14 (I,J) Emissions from vegetation [kg] HG-SRCE
15 (I,J) Emissions from soils [kg] HG-SRCE
16 (I,J) Flux-up Hg0 volat from ocean [kg] HG-SRCE
17 (I,J) Flux-down Hg0 dry dep to ocean [kg] HG-SRCE
18 (I,J) Snow emission of Hg [kg] HG-SRCE
19 (I,J,L) Production of Hg2 from Hg0 [kg] PL-HG2-$
20 (I,J,L) Production of Hg2 from rxn w/ OH [kg] PL-HG2-$
21 (I,J,L) Production of Hg2 from rxn w/ O3 [kg] PL-HG2-$
22 (I,J,L) Loss of Hg2 from rxn w/ sea salt [kg] PL-HG2-$
23 (I,J,L) Loss rate of Hg2 from rxn w/ sea salt [s-1] PL-HG2-$
24 (I,J,L) Production of Hg2 from Br [kg] PL-HG2-$
25 (I,J,L) Br concentration [kg] PL-HG2-$
26 (I,J,L) BrO concentration [kg] PL-HG2-$
27 (I,J,L) Particulate bound mercury [pptv] PL-HG2-$
28 (I,J,L) Reactive gaseous mercury [pptv] PL-HG2-$
29 (I,J,L) Oceanic Hg0 [kg] OCEAN-HG
30 (I,J,L) Oceanic Hg2 [kg] OCEAN-HG
31 (I,J,L) Oceanic HgP [kg] OCEAN-HG
32 (I,J,L) Total Hg in snowpack [kg] SNOW-HG
33 + Tagged tracers

ND04: CO2 sources

ND04 Dimension CO2 SOURCES Units Category
1 (I,J) CO2 fossil fuel emiss [atoms C/cm2/s] CO2-SRCE
2 (I,J) CO2 ocean emissions [atoms C/cm2/s] CO2-SRCE
3 (I,J) CO2 balanced biosphere [atoms C/cm2/s] CO2-SRCE
4 (I,J) CO2 biomass burning emiss [atoms C/cm2/s] CO2-SRCE
5 (I,J) CO2 biofuel emission [atoms C/cm2/s] CO2-SRCE
6 (I,J) CO2 net terrestrial exchange [atoms C/cm2/s] CO2-SRCE
7 (I,J) CO2 ship emissions [atoms C/cm2/s] CO2-SRCE
8 (I,J,L) CO2 aircraft emissions [atoms C/cm2/s] CO2-SRCE
9 (I,J,L) CO2 chemical source [atoms C/cm2/s] CO2-SRCE
10 (I,J) CO2 chemical source surface correction [atoms C/cm2/s] CO2-SRCE

ND05: P/L for sulfate aerosols

ND05 Dimension PROD/LOSS for SULFATE CHEMISTRY QUANTITIES Units Category
1 (I,J,L) P(SO2) from DMS + OH [kg S] PL-SUL-$
2 (I,J,L) P(SO2) from DMS + NO3 [kg S] PL-SUL-$
3 (I,J,L) Total P(SO2) [kg S] PL-SUL-$
4 (I,J,L) P(MSA) from DMS [kg S] PL-SUL-$
5 (I,J,L) P(SO4) gas phase [kg S] PL-SUL-$
6 (I,J,L) P(SO4) by cloud H2O2 [kg S] PL-SUL-$
7 (I,J,L) P(SO4) by cloud O3 [kg S] PL-SUL-$
8 (I,J,L) P(SO4) by seasalt O3 [kg S] PL-SUL-$
9 (I,J,L) L(OH) by DMS [kg OH] PL-SUL-$
10 (I,J,L) L(NO3) by DMS [kg NO3] PL-SUL-$

ND06: Dust emissions

ND06 Dimension DESERT DUST EMISSIONS Units Category
1 (I,J) DST1 (Dust aerosol, Reff = 0.7 microns) [kg] DUSTSRCE
2 (I,J) DST2 (Dust aerosol, Reff = 1.4 microns) [kg] DUSTSRCE
3 (I,J) DST3 (Dust aerosol, Reff = 2.4 microns) [kg] DUSTSRCE
4 (I,J) DST4 (Dust aerosol, Reff = 4.5 microns) [kg] DUSTSRCE

ND07: BC and OC sources

ND07 Dimension SOURCES OF BLACK CARBON & ORGANIC CARBON Units Category
1 (I,J) BLACK CARBON from anthro sources [kg] BC-ANTH
2 (I,J) BLACK CARBON from biomass burning [kg] BC-BIOB
3 (I,J) BLACK CARBON from biofuels [kg] BC-BIOF
4 (I,J,L) Hydrophilic BC from Hydrophobic BC [kg] PL-BC=$
5 (I,J) ORGANIC CARBON from anthro sources [kg] OC-ANTH
6 (I,J) ORGANIC CARBON from biomass burning [kg] OC-BIOB
7 (I,J) ORGANIC CARBON from biofuels [kg] OC-BIOF
8 (I,J) ORGANIC CARBON from biogenic sources [kg] OC-BIOG
9 (I,J,L) Hydrophilic OC from Hydrophobic OC [kg] PL-OC=$

ND07 diagnostic quantities for SOA simulations

The ND07 diagnostic quantities below are only defined for mechanisms with secondary organic aerosols (Standard, SOA, SOA-SVPOA).

ND07 Dimension SOURCES OF BLACK CARBON & ORGANIC CARBON Units Category
10 (I,J) ORGANIC CARBON : a-pinene, b-pinene, sabinene, carene source [kg] OC-MTPA
11 (I,J) ORGANIC CARBON : limonene source [kg] OC-LIMO
12 (I,J) ORGANIC CARBON : terpinene, terpinolene, myrcene, ocimene, other monoterpenes source [kg] OC-MTPO
13 (I,J) ORGANIC CARBON : sesquiterpene source [kg] OC-SESQ
15 (I,J,L) SOA produced from monoterpenes + sesquiterpenes [kg] PL-OC=$
16 (I,J,L) SOA produced from isoprene [kg] PL-OC=$
17 (I,J,L) SOA produced from light aromatics and IVOCs [kg] PL-OC=$
18 (I,J,L) SOA produced from primary SVOCs [kg] PL-OC=$
19 (I,J,L) SOA produced from POG + OH reaction [kg] PL-OC=$
20 (I,J,L) SOAG production from GLYX in aerosol [kg] SOAGM=$
21 (I,J,L) SOAM production from MGLY in aerosol [kg] SOAGM=$
22 (I,J,L) SOAG production from GLYX in cloud [kg] SOAGM=$
23 (I,J,L) SOAM production from MGLY in cloud [kg] SOAGM=$

ND08: Sea salt emissions

ND08 Dimension SEA SALT EMISSIONS Units Category
1 (I,J) Accumulation mode seasalt [kg] SALTSRCE
2 (I,J) Coarse mode seasalt [kg] SALTSRCE

ND09: HCN and CH3CN sources and sinks

ND09 Dimension HCN & CH3CN sources & sinks Units Category
1 (I,J,L,N) Loss of tagged tracer to OH [kg] HCN-PL-$
2 (I,J) HCN from biomass burning [molec/cm2/s] HCN-SRCE
3 (I,J) CH3CN from biomass burning [molec/cm2/s] HCN-SRCE
4 (I,J) HCN from domestic fossil fuel [molec/cm2/s] HCN-SRCE
5 (I,J) CH3CN from domestic fossil fuel [molec/cm2/s] HCN-SRCE
6 (I,J) HCN loss to ocean uptake [molec/cm2/s] HCN-SRCE
7 (I,J) CH3CN loss to ocean uptake [molec/cm2/s] HCN-SRCE

ND11: Acetone sources and sinks

ND11 Dimension ACETONE SOURCES & SINKS Units Category
1 (I,J) Acetone source from MONOTERPENES [at C/cm2/s] ACETSRCE
2 (I,J) Acetone source from METHYL BUTENOL [at C/cm2/s] ACETSRCE
3 (I,J) Acetone source from DIRECT BIOGENIC EMISSION [at C/cm2/s] ACETSRCE
4 (I,J) Acetone source from OCEANS [at C/cm2/s] ACETSRCE
5 (I,J) Acetone sink from OCEANS [at C/cm2/s] ACETSRCE

ND12: PBL diagnostics

ND12 Dimension Distribution of emissions in the PBL Units Category
1 (I,J,L) Fraction of boundary layer occupied by level L [unitless] EMDIS-BL

ND13: Sulfur emissions

ND13 Dimension TROPOSPHERIC SULFUR EMISSIONS Units Category
1 (I,J) Biogenic DMS [kg S] DMS-BIOG
2 (I,J,L) Aircraft SO2 (1 <= L <= ND13) [kg S] SO2-AC-$
3 (I,J,L) Anthropognic SO2 (1 <= L <= 2 ) [kg S] SO2-AN-$
4 (I,J) Biomass SO2 [kg S] SO2-BIOB
5 (I,J) Biofuel SO2 [kg S] SO2-BIOF
6 (I,J,L) Non-eruptive volcano SO2 (1 <= L <= ND13) [kg S] SO2-NV-$
7 (I,J,L) Eruptive volcano SO2 (1 <= L <= ND13) [kg S] SO2-EV-$
8 (I,J) Ship SO2 [kg S] SO2-SHIP
9 (I,J,L) Anthropogenic SO4 (1 <= L <= 2 ) [kg S] SO4-AN-$
10 (I,J) Biofuel SO4 [kg S] SO4-BIOF
11 (I,J) Natural NH3 [kg S] NH3-NATU
12 (I,J) Anthropogenic NH3 [kg] NH3-AN-$
13 (I,J) Biomass NH3 [kg] NH3-BIOB
14 (I,J) Biofuel NH3 [kg] NH3-BIOF

ND14: Convective mass flux

ND14 Dimension UPWARD MASS FLUX DUE TO WET CONVECTION Units Category
1 (I,J,L,N) Mass change due to cloud convection [kg/s] CV-FLX-$

ND15: Boundary layer mixing mass flux

ND15 Dimension UPWARD MASS FLUX FROM BOUNDARY-LAYER MIXING Units Category
1 (I,J,L,N) Mass change due to boundary-layer mixing [kg/s] TURBMC-$

ND16: Precipiration fractions

ND16 Dimension AREAL FRACTION OF PRECIP Units Category
1 (I,J,L) Fraction of grid box having rainout + washout (large-scale precip) [unitless] WD-FRC-$
2 (I,J,L) Fraction of grid box having rainout + washout (convectvive precip) [unitless] WD-FRC-$

ND17: Rainout fraction

ND17 Dimension RAINOUT FRACTION IN PRECIP Units Category
1 (I,J,L,N) Fraction of soluble tracer lost to rainout (large-scale precip) [unitless] WD-LSR-$
2 (I,J,L,N) Fraction of soluble tracer lost to rainout (convective precip) [unitless] WD-CVR-$

ND18: Washout fraction

ND18 Dimension WASHOUT FRACTION IN PRECIP Units Category
1 (I,J,L,N) Fraction of soluble tracer lost to washout (large-scale precip) [unitless] WD-LSW-$
2 (I,J,L,N) Fraction of soluble tracer lost to washout (convective precip) [unitless] WD-CVW-$

ND19: CH4 loss

ND18 Dimension CH4 LOSS Units Category
1 (I,J,L) CH4 removal by OH [kg CH4] CH4-LOSS

ND20: Save O3 P/L rates

ND20 Dimension O3 PROD/LOSS Units Category
1 (I,J,L,1) O3 production rates [kg/m3/s] POR-L=$
2 (I,J,L,2) O3 loss rates [1/m3/s] POR-L=$

ND21: Cloud diagnostics

ND21 Dimension CLOUD OPTICAL DEPTHS AND CLOUD FRACTIONS Units Category
1 (I,J,L) OPTD: Cloud optical depth [unitless] OD-MAP-$
2 (I,J,L) CLDTOT: 3-D total cloud fraction (GEOS-4) unitless] OD-MAP-$
4 (I,J,L) OPD: Mineral dust optical depth for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
5 (I,J,L) SD: Mineral dust surface area [cm2/cm3] OD-MAP-$
6 (I,J,L) OPSO4: Sulfate optical depth for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
7 (I,J,L) HGSO4: Hygroscopic growth of SO4 [unitless] OD-MAP-$
8 (I,J,L) SSO4: Sulfate surface area [cm2/cm3] OD-MAP-$
9 (I,J,L) OPBC: Black carbon optical depth for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
10 (I,J,L) HGBC: Hygroscopic growth of BC [unitless] OD-MAP-$
11 (I,J,L) SBC: Black carbon surface area [cm2/cm3] OD-MAP-$
12 (I,J,L) OPOC: Organic carbon optical depth for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
13 (I,J,L) HGOC: Hygroscopic growth of OC [unitless] OD-MAP-$
14 (I,J,L) SOC: Organic carbon surface area [cm2/cm3] OD-MAP-$
15 (I,J,L) OPSSa: Sea salt (accumulation mode) optical depth for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
16 (I,J,L) HGSSa: Hygroscopic growth of SSa [unitless] OD-MAP-$
17 (I,J,L) SSSa: Sea salt (accumulation mode) surface area [cm2/cm3] OD-MAP-$
18 (I,J,L) OPSSc: Sea salt (coarse mode) optical depth for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
19 (I,J,L) HGSSc: Hygroscopic growth of SSc [unitless] OD-MAP-$
20 (I,J,L) SSSc: Sea salt (coarse mode) surface area [cm2/cm3] OD-MAP-$
21 (I,J,L) OPD1: Dust bin 1 AOD for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
22 (I,J,L) OPD2:Dust bin 2 AOD for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
23 (I,J,L) OPD3: Dust bin 3 AOD for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
24 (I,J,L) OPD4: Dust bin 4 AOD for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
25 (I,J,L) OPD5: Dust bin 5 AOD for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
26 (I,J,L) OPD6: Dust bin 6 AOD for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
27 (I,J,L) OPD7: Dust bin 7 AOD for 1st wavelength specified in Radiation Menu [unitless] OD-MAP-$
28 (I,J,L) OPSO4: Sulfate optical depth for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
29 (I,J,L) OPBC: Black carbon optical depth for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
30 (I,J,L) OPOC: Organic carbon optical depth for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
31 (I,J,L) OPSSa: Accum. sea salt optical depth for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
32 (I,J,L) OPSSc: Coarse sea salt optical depth for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
33 (I,J,L) OPD1:Dust bin 1 AOD for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
34 (I,J,L) OPD2:Dust bin 2 AOD for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
35 (I,J,L) OPD3: Dust bin 3 AOD for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
36 (I,J,L) OPD4: Dust bin 4 AOD for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
37 (I,J,L) OPD5: Dust bin 5 AOD for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
38 (I,J,L) OPD6: Dust bin 6 AOD for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
39 (I,J,L) OPD7: Dust bin 7 AOD for 2nd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
40 (I,J,L) OPSO4: Sulfate optical depth for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
41 (I,J,L) OPBC: Black carbon optical depth for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
42 (I,J,L) OPOC: Organic carbon optical depth for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
43 (I,J,L) OPSSa: Accum. sea salt optical depth for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
44 (I,J,L) OPSSc: Coarse sea salt optical depth for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
45 (I,J,L) OPD1:Dust bin 1 AOD for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
46 (I,J,L) OPD2:Dust bin 2 AOD for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
47 (I,J,L) OPD3: Dust bin 3 AOD for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
48 (I,J,L) OPD4: Dust bin 4 AOD for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
49 (I,J,L) OPD5: Dust bin 5 AOD for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
50 (I,J,L) OPD6: Dust bin 6 AOD for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
51 (I,J,L) OPD7: Dust bin 7 AOD for 3rd wavelength specified in Radiation Menu (optional) [unitless] OD-MAP-$
52 (I,J,L) ODSLA: Stratospheric liquid aerosol optical depth (600 nm) (UCX simulation only) [unitless] OD-MAP-$
53 (I,J,L) SASLA: Stratospheric liquid aerosol surface area (UCX simulation only) [cm2/cm3] OD-MAP-$
54 (I,J,L) NDSLA: Stratospheric liquid aerosol number density (UCX simulation only) [num/cm3] OD-MAP-$
55 (I,J,L) ODSPA: Polar stratospheric cloud type 1a/2 optical depth (600 nm) (UCX simulation only) [unitless] OD-MAP-$
56 (I,J,L) SASPA: Polar stratospheric cloud type 1a/2 surface area (UCX simulation only) [cm2/cm3] OD-MAP-$
57 (I,J,L) NDSPA: Stratospheric particulate aerosol number density (UCX simulation only) [num/cm3] OD-MAP-$

ND22: Photolysis diagnostics

ND22 Dimension PHOTOLYSIS RATES (aka J-Values) Units Category
1 (I,J,L) J(NO2) [1/s] JV-MAP-$
2 (I,J,L) J(HNO3) [1/s] JV-MAP-$
3 (I,J,L) J(H2O2) [1/s] JV-MAP-$
4 (I,J,L) J(CH2O) [1/s] JV-MAP-$
5 (I,J,L) J(O3) [1/s] JV-MAP-$
6 (I,J,L) OH source from O3 photolysis (standard fullchem simulation) or
J(O3P) (UCX simulation)
[1/s] JV-MAP-$
7 (I,J,L) J(GLYX) [1/s] JV-MAP-$
8 (I,J,L) J(MGLY) [1/s] JV-MAP-$
9 (I,J,L) J(BrO) [1/s] JV-MAP-$
10 (I,J,L) J(HOBr) [1/s] JV-MAP-$
11 (I,J,L) J(BrNO2) [1/s] JV-MAP-$
12 (I,J,L) J(BrNO3) [1/s] JV-MAP-$
13 (I,J,L) J(CHBr3) [1/s] JV-MAP-$
14 (I,J,L) J(Br2) [1/s] JV-MAP-$
15 (I,J,L) J(O2) [1/s] JV-MAP-$
16 (I,J,L) J(N2O) [1/s] JV-MAP-$
17 (I,J,L) J(NO) [1/s] JV-MAP-$
18 (I,J,L) J(NO3) [1/s] JV-MAP-$
19 (I,J,L) J(CFC11) [1/s] JV-MAP-$
20 (I,J,L) J(CFC12) [1/s] JV-MAP-$
21 (I,J,L) J(CCl4) [1/s] JV-MAP-$
22 (I,J,L) J(CH3Cl) [1/s] JV-MAP-$
23 (I,J,L) J(ACET) [1/s] JV-MAP-$
24 (I,J,L) J(ALD2) [1/s] JV-MAP-$
25 (I,J,L) J(MVK) [1/s] JV-MAP-$
26 (I,J,L) J(MACR) [1/s] JV-MAP-$
27 (I,J,L) J(HAC) [1/s] JV-MAP-$
28 (I,J,L) J(GLYC) [1/s] JV-MAP-$

ND23: Mean OH

ND22 Dimension MASS-WEIGHTED OH CONCENTRATION Units Category
Mean OH concentration diagnostic (printed to log file) [105 molec/cm3]

ND24 - ND26: Mass transport flux

For more information about how these diagnostics are defined, please see our Mass Flux (ND24/25/26) wiki page.

ND24 Dimension EASTWARD MASS TRANSPORT FLUX Units Category
ND24 (I,J,L,N) East/west mass flux by transport [kg/s] EW-FLX-$
ND25 (I,J,L,N) North/south mass flux by transport [kg/s] NS-FLX-$
ND26 (I,J,L,N) Up/down mass flux by transport [kg/s] UP-FLX-$

ND28: Biomass burning emissions

ND28 Dimension BIOMASS BURNING EMISSIONS Units Category
1 (I,J) NO biomass emissions [molec/cm2/s] BIOBSRCE
4 (I,J) CO biomass emissions [molec/cm2/s] BIOBSRCE
5 (I,J) ALK4 biomass emissions [atoms C/cm2/s] BIOBSRCE
9 (I,J) ACET biomass emissions [atoms C/cm2/s] BIOBSRCE
10 (I,J) MEK biomass emissions [atoms C/cm2/s] BIOBSRCE
11 (I,J) ALD2 biomass emissions [atoms C/cm2/s] BIOBSRCE
18 (I,J) PRPE (lumped >=C3 alkenes) biomass emissions [atoms C/cm2/s] BIOBSRCE
19 (I,J) C3H8 biomass emissions [atoms C/cm2/s] BIOBSRCE
20 (I,J) CH2O biomass emissions [molec/cm2/s] BIOBSRCE
21 (I,J) C2H6 biomass emissions [atoms C/cm2/s] BIOBSRCE
26 (I,J) SO2 biomass emissions [molec/cm2/s] BIOBSRCE
30 (I,J) NH3 biomass emissions [molec/cm2/s] BIOBSRCE
34 (I,J) BC (black carbon) biomass emissions [molec/cm2/s] BIOBSRCE
35 (I,J) OC (organic carbon) biomass emissions [molec/cm2/s] BIOBSRCE
69 (I,J) CH4 biomass emissions [molec/cm2/s] BIOBSRCE

ND29: CO sources

ND29 Dimension CO EMISSIONS Units Category
1 (I,J) CO from anthropogenic emissions [molec/cm2/s] CO--SRCE
2 (I,J) CO from biomass burning emissions [molec/cm2/s] CO--SRCE
3 (I,J) CO from biofuel burning emissions [molec/cm2/s] CO--SRCE
4 (I,J) CO produced from methanol (currently not defined) [molec/cm2/s] CO--SRCE
5 (I,J) CO produced from monoterpenes [molec/cm2/s] CO--SRCE
6 (I,J) CO from ship emissions [molec/cm2/s] CO--SRCE
For tagged CO simulations only:
7 (I,J) CO from anthropogenic + biofuel emissions over the US [molec/cm2/s] CO--SRCE
8 (I,J) CO from aircraft emissions over the US [molec/cm2/s] CO--SRCE
9 (I,J) CO from ship emissions over the US [molec/cm2/s] CO--SRCE
10 (I,J) CO from anthropogenic + biofuel emissions over Europe [molec/cm2/s] CO--SRCE
11 (I,J) CO from aircraft emissions over Europe [molec/cm2/s] CO--SRCE
12 (I,J) CO from ship emissions over Europe [molec/cm2/s] CO--SRCE
13 (I,J) CO from anthropogenic + biofuel emissions over SE Asia [molec/cm2/s] CO--SRCE
14 (I,J) CO from aircraft emissions over SE Asia [molec/cm2/s] CO--SRCE
15 (I,J) CO from ship emissions over SE Asia [molec/cm2/s] CO--SRCE
16 (I,J) CO from anthropogenic + biofuel emissions elsewhere [molec/cm2/s] CO--SRCE
17 (I,J) CO from aircraft emissions elsewhere [molec/cm2/s] CO--SRCE
18 (I,J) CO from ship emissions elsewhere [molec/cm2/s] CO--SRCE
19 (I,J) CO from biomass burning emissions over South America [molec/cm2/s] CO--SRCE
20 (I,J) CO from biomass burning emissions over Africa [molec/cm2/s] CO--SRCE
21 (I,J) CO from biomass burning emissions over SE Asia [molec/cm2/s] CO--SRCE
22 (I,J) CO from biomass burning emissions over Oceania [molec/cm2/s] CO--SRCE
23 (I,J) CO from biomass burning emissions over Europe [molec/cm2/s] CO--SRCE
24 (I,J) CO from biomass burning emissions elsewhere [molec/cm2/s] CO--SRCE

ND30: Land map

ND30 Dimension LAND MAP Units Category
1 (I,J) GMAO land-water indices [unitless] LANDMAP

ND31: Pressure at model edges

ND31 Dimension LAND MAP Units Category
1 (I,J,L) Pressure at the bottom of level L (1 <= L <= ND31 ) [hPa] PEDGE-$

ND32: NO emissions

ND32 Dimension NO EMISSIONS Units Category
1 (I,J,L) NO aircraft emissions [molec/cm2/s] NO-AC-$
2 (I,J) NO anthropogenic emissions (includes ship) [molec/cm2/s] NO-AN-$
3 (I,J) NO biomass burning emissions [molec/cm2/s] NO-BIOB
4 (I,J) NO biofuel burning emissions [molec/cm2/s] NO-BIOF
5 (I,J) NO fertilizer emissions [molec/cm2/s] NO-FERT
6 (I,J,L) NO lightning emissions [molec/cm2/s] NO-LI-$
7 (I,J) NO soil emissions [molec/cm2/s] NO-SOIL

ND34: Biofuel emissions

ND32 Dimension BIOFUEL EMISSIONS Units Category
1 (I,J) NO biofuel emissions [molec/cm2/s] BIOFSRCE
4 (I,J) CO biofuel emissions [molec/cm2/s] BIOFSRCE
5 (I,J) ALK4 biofuel emissions [atoms C/cm2/s] BIOFSRCE
9 (I,J) ACET biofuel emissions [atoms C/cm2/s] BIOFSRCE
10 (I,J) MEK biofuel emissions [atoms C/cm2/s] BIOFSRCE
11 (I,J) ALD2 biofuel emissions [atoms C/cm2/s] BIOFSRCE
18 (I,J) PRPE (lumped >=C3 alkenes) biofuel emissions [atoms C/cm2/s] BIOFSRCE
19 (I,J) C3H8 biofuel emissions [atoms C/cm2/s] BIOFSRCE
20 (I,J) CH2O biofuel emissions [molec/cm2/s] BIOFSRCE
21 (I,J) C2H6 biofuel emissions [atoms C/cm2/s] BIOFSRCE

ND36: Anthropogenic emissions

ND36 Dimension ANTHROPOGENIC EMISSIONS Units Category
1 (I,J) NO anthropogenic emissions [molec/cm2/s] ANTHSRCE
4 (I,J) CO anthropogenic emissions [molec/cm2/s] ANTHSRCE
5 (I,J) ALK4 anthropogenic emissions [atoms C/cm2/s] ANTHSRCE
9 (I,J) ACET anthropogenic emissions [atoms C/cm2/s] ANTHSRCE
10 (I,J) MEK anthropogenic emissions [atoms C/cm2/s] ANTHSRCE
11 (I,J) ALD2 anthropogenic emissions [atoms C/cm2/s] ANTHSRCE
18 (I,J) PRPE (lumped >=C3 alkenes) anthropogenic emissions [atoms C/cm2/s] ANTHSRCE
19 (I,J) C3H8 anthropogenic emissions [atoms C/cm2/s] ANTHSRCE
20 (I,J) CH2O anthropogenic emissions [molec/cm2/s] ANTHSRCE
21 (I,J) C2H6 anthropogenic emissions [atoms C/cm2/s] ANTHSRCE
69 (I,J) CH4 anthropogenic emissions [atoms C/cm2/s] ANTHSRCE

ND37: Fraction of species scavenged in updrafts

ND37 Dimension UPDRAFT SCAVENGING FRACTION Units Category
1 (I,J,L,N) Fraction of tracer scavenged by in cloud updrafts in moist convection [unitless] MC-FRC-$

ND38: Loss of species by convection

ND38 Dimension LOSS OF TRACER IN MOIST CONVECTION Units Category
1 (I,J,L,N) Rainout loss of tracer in convective updrafts [kg/s] WETDCV-$

ND39: Loss of species by rainout and washout

ND39 Dimension LOSS OF SPECIES IN AEROSOL WET DEPOSITION Units Category
1 (I,J,L,N) Loss of species in large-scale precip [kg/s] WETDLS-$

ND40: Plane flight diagnostic

ND40 Dimension PLANE FLIGHT DIAGNOSTIC Units Category
Turn on plane flight diagnostic (DO_PF = T). This diagnostic does not save to the bpch file, but rather is output to the specified plane.log file.

ND41: Afternoon PBL height

ND41 Dimension AFTERNOON PBL HEIGHT Units Category
1 (I,J) Afternoon boundary layer heights (1200-1600 local time) [m] PBLDEPTH

ND42: SOA diagnostics

These output are only available for simulations using secondary organic aerosols (Standard, SOA, SOA-SVPOA).

ND42 Dimension SOA CONCENTRATIONS Units Category
1 (I,J,L) Aerosol products of terpene oxidation [ug/m3] IJ-SOA-$
2 (I,J,L) Aerosol products of isoprene oxidation [ug/m3] IJ-SOA-$
3 (I,J,L) Aerosol products of light aromatics + IVOC oxidation [ug/m3] IJ-SOA-$
4 (I,J,L) Aerosols from SVOCs [ug/m3] IJ-SOA-$
5 (I,J,L Aerosol products of POG oxidation [ug/m3] IJ-SOA-$
6 (I,J,L) Sum of all organic aerosol [ug/m3] IJ-SOA-$
7 (I,J,L) Sum of all organic carbon [ug/m3] IJ-SOA-$
8 (I,J,L) Sum of all biogenic organic aerosol [ug/m3] IJ-SOA-$
9 (I,J,L) NO branching ratio [ug C/m3] IJ-SOA-$
10 (I,J,L) Aerosols from SVOCs [ug C/m3] IJ-SOA-$
11 (I,J,L) Aerosol products of POG oxidation [ug/m3] IJ-SOA-$
12 (I,J,L) Organic carbon (OCPI + OCPO) [ug C/m3] IJ-SOA-$
13 (I,J,L) Black carbon (BCPI + BCPO) [ug C/m3] IJ-SOA-$
14 (I,J,L) SO4 [ug/m3] IJ-SOA-$
15 (I,J,L) NH4 [ug/m3] IJ-SOA-$
16 (I,J,L) NIT [ug/m3] IJ-SOA-$
17 (I,J,L) SAL [ug/m3] IJ-SOA-$
18 (I,J,L) PM2.5 [ug/m3] IJ-SOA-$

ND43: Chemical production of OH and HO2

ND43 Dimension CHEMICAL PRODUCTION OF VARIOUS SPECIES Units Category
1 (I,J,L) OH [molec/cm3] CHEM-L=$
3 (I,J,L) HO2 [v/v] CHEM-L=$
4 (I,J,L) O1D [molec/cm3] CHEM-L=$
5 (I,J,L) O3P [molec/cm3] CHEM-L=$
6 (I,J,L) LBRO2H [molec/cm3] CHEM-L=$
7 (I,J,L) LBRO2N [molec/cm3] CHEM-L=$
8 (I,J,L) LTRO2H [molec/cm3] CHEM-L=$
9 (I,J,L) LTRO2N [molec/cm3] CHEM-L=$
10 (I,J,L) LXRO2H [molec/cm3] CHEM-L=$
11 (I,J,L) LXRO2N [molec/cm3] CHEM-L=$

ND44: Dry deposition diagnostics

ND44 Dimension DRYDEP ( M = NUMber DEP ) Units Category
1 (I,J,M) Dry deposition fluxes (M = 1, NUMDEP) [molec/cm2/s] DRYD-FLX
2 (I,J,M) Dry deposition velocities (M = 1, NUMDEP) [cm/s] DRYD-VEL

ND45: Species concentrations

ND45 Dimension SPECIES CONCENTRATIONS Units Category
1 (I,J,L,N) Species mixing ratio for Levels = 1, LD45, averaged between HR1_OTH and HR2_OTH (time range from input.geos) [v/v] IJ-AVG-$

ND46: Biogenic emissions

ND46 Dimension BIOGENIC EMISSIONS Units Category
1 (I,J) ISOP: Isoprene [atoms C/cm2/s] BIOGSRCE
2 (I,J) ACET: Acetone [atoms C/cm2/s] BIOGSRCE
3 (I,J) PRPE: Lumped >= C3 alkenes [atoms C/cm2/s] BIOGSRCE
4 (I,J) MONX: Total monoterpenes [atoms C/cm2/s] BIOGSRCE
5 (I,J) MBOX: Methyl Butenol [atoms C/cm2/s] BIOGSRCE
6 (I,J) C2H4: Ethene [atoms C/cm2/s] BIOGSRCE
7 (I,J) APIN: a-Pinene [atoms C/cm2/s] BIOGSRCE
8 (I,J) BPIN: b-Pinene [atoms C/cm2/s] BIOGSRCE
9 (I,J) LIMO: Limonene [atoms C/cm2/s] BIOGSRCE
10 (I,J) SABI: Sabinene [atoms C/cm2/s] BIOGSRCE
11 (I,J) MYRC: Myrcene [atoms C/cm2/s] BIOGSRCE
12 (I,J) CARE: 3-Carene [atoms C/cm2/s] BIOGSRCE
13 (I,J) OCIM: Ocimene [atoms C/cm2/s] BIOGSRCE
14 (I,J) FAXX: Formic acid (currently not activated) [atoms C/cm2/s] BIOGSRCE
15 (I,J) AAXX: Acetic acid (currently not activated) [atoms C/cm2/s] BIOGSRCE
16 (I,J) ALD2: Acetaldehyde [atoms C/cm2/s] BIOGSRCE
17 (I,J) OMON: Other monoterpenes [atoms C/cm2/s] BIOGSRCE
18 (I,J) MOHX: Methanol (currently not activated) [atoms C/cm2/s] BIOGSRCE
19 (I,J) ETOH: Ethanol (currently not activated) [atoms C/cm2/s] BIOGSRCE
20 (I,J) FARN: Farnesene [atoms C/cm2/s] BIOGSRCE
21 (I,J) BCAR: b-Caryophyllene [atoms C/cm2/s] BIOGSRCE
22 (I,J) OSQT: Other sesquiterpenes [atoms C/cm2/s] BIOGSRCE
23 (I,J) CHBr3: Ocean bromoform emissions [kg/m2/s] BIOGSRCE
24 (I,J) CH2Br2: Ocean dibromomethane emissions [kg/m2/s] BIOGSRCE
25 (I,J) Br2: Sea-salt Br2 emissions [kg/m2/s] BIOGSRCE
26 (I,J) CH4: Methane [molec/c2/s] BIOGSRCE

ND47: 24h average concentrations

ND47 Dimension 24-h AVERAGE TRACER CONCENTRATION Units Category
1 (I,J,L,N) Daily (24-h) average tracer mixing ratio for Levels = L, LD47 [v/v] IJ-24H-$

ND49: instantaneous timeseries

ND47 Dimension 3-D TIMESERIES DIAGNOSTICS Units Category
1-N (I,J,L) GEOS-Chem transported tracers Advected species number for GAMAP = 1 .. nAdvect) [v/v] IJ-AVG-$
151 (I,J,L) OH concentration (Tracer # for GAMAP = 1) [molec/cm3] TIME-SER
152 (I,J,L) NOy concentration (Tracer # for GAMAP = 2) [v/v] TIME-SER
153 (I,J,L) Relative humidity (Tracer # for GAMAP = 3) [%] TIME-SER
154 (I,J,L) 3-D Cloud fractions (Tracer # for GAMAP = 4) [unitless] TIME-SER
155 (I,J) Column optical depths (Tracer # for GAMAP = 5) [unitless] TIME-SER
156 (I,J) Cloud top heights (Tracer # for GAMAP = 6) [hPa] TIME-SER
157 (I,J,L) Air density (Tracer # for GAMAP = 7) [molec/cm3] TIME-SER
158 (I,J,L) Total sea salt tracer concentration (Tracer # for GAMAP = 8) [unitless] TIME-SER
159 (I,J) PBL heights (Tracer # for GAMAP = 1) [m] PBLDEPTH
160 (I,J) PBL heights (Tracer # for GAMAP = 2) [levels] PBLDEPTH
161 (I,J,L) Grid box height (Tracer # for GAMAP = 1) [m] BXHGHT-$
162 (I,J,L) Pressure at level edges (Tracer # for GAMAP = 1) [hPa] PEDGE-$
163 (I,J) Sea level pressure (Tracer # for GAMAP = 18) [hPa] DAO-FLDS
164 (I,J,L) Zonal wind (a.k.a. U-wind) (Tracer # for GAMAP = 1) [m/s] DAO-3D-$
165 (I,J,L) Meridional wind (a.k.a. V-wind) (Tracer # for GAMAP = 2) [m/s] DAO-3D-$
166 (I,J,L) Temperature (Tracer # for GAMAP = 3) [K] DAO-3D-$
167 (I,J,L) Sulfate aerosol optical depth (Tracer # for GAMAP = 6) [unitless] OD-MAP-$
168 (I,J,L) Black carbon aerosol optical depth (Tracer # for GAMAP = 9) [unitless] OD-MAP-$
169 (I,J,L) Organic carbon aerosol optical depth (Tracer # for GAMAP = 12) [unitless] OD-MAP-$
170 (I,J,L) Accumulation mode seasalt optical depth (Tracer # for GAMAP = 15) [unitless] OD-MAP-$
171 (I,J,L) Coarse mode seasalt optical depth (Tracer # for GAMAP = 18) [unitless] OD-MAP_$
172 (I,J,L) Total dust optical depth (Tracer # for GAMAP = 4) [unitless] OD-MAP-$
173-179 (I,J,L) Size resolved dust optical depth (Tracer # for GAMAP = 21-27) [unitless] OD-MAP-$
180 (I,J) PARDF (diffuse PAR) (Tracer # for GAMAP = 20) [W/m2] DAO-FLDS
181 (I,J) PARDR (direct PAR) (Tracer # for GAMAP = 21) [W/m2] DAO-FLDS
182 (I,J) Daily LAI (leaf area index) (Tracer # for GAMAP = 9) [cm2/cm2] TIME-SER
183 (I,J) Temperature at 2m (i.e. proxy for surface air temperature) (Tracer # for GAMAP = 5) [K] DAO-FLDS
184 (I,J) Accumulated precipitation (Tracer # for GAMAP = 3) [mm/day] DAO-FLDS

ND50: 24h average timeseries

ND50 Dimension AVERAGE TRACER TIMESERIES Units Category
(I,J,L) Archives the the same diagnostic quantities as ND49 (listed above)

ND51 and ND51b: Satellite timeseries

ND51 and ND51b Dimension SATELLITE TRACER TIMESERIES Units Category
(I,J,L) Archives the the same diagnostic quantities as ND49 (listed above)

ND52: Gamma HO2

ND52 Dimension GAMMA HO2 Units Category
1 (I,J,L) Uptake coefficient for HO2 by aerosols NOTE: This diagnostic is mostly obsolete. We now set this value in the Chemistry Menu of input.geos. [unitless] GAMMA

ND53: POPs diagnostics

ND52 Dimension POPS EMISSIONS Units Category
1 (I,J) Total POPs emissions [kg] PG-SRCE
2 (I,J) POP OC emissions [kg] PG-SRCE
3 (I,J) POP BC emissions [kg] PG-SRCE
4 (I,J) Gas-phase POPs emissions [kg] PG-SRCE
5 (I,J,L) Gross POP OC lost to gas [kg] PG-PP
6 (I,J,L) Gross POP OC formed from gas [kg] PG-PP
7 (I,J,L) Gross POP BC lost to gas [kg] PG-PP
8 (I,J,L) Gross POP BC formed from gas [kg] PG-PP
9 (I,J,L) Production of oxidized POPG from reaction with OH [kg] PG-PP
10 (I,J,L) Production of oxidized POPOC from reaction with O3 [kg] PG-PP
11 (I,J,L) Production of oxidized POPBC from reaction with O3 [kg] PG-PP

ND54: Time in troposphere

ND52 Dimension FRACTION OF TIME IN THE TROPOPSPHERE Units Category
1 (I,J,L) Computes the amount of time that a given grid box spends in the troposphere [1] TIME-TPS

ND55: Tropopause diagnostics

ND55 Dimension DYNAMIC TROPOPAUSE DIAGNOSTICS Units Category
1 (I,J) Level at which the dynamic tropopause occurs [unitless] TR-PAUSE
2 (I,J) Height of the dynamic tropopause [km] TR-PAUSE
3 (I,J) Pressure of the dynamic tropopause [mb]

ND56: Lightning diagnostics

ND56 Dimension LIGHTNING FLASHES Units Category
1 (I,J) Total lightning flash rate [flashes/min/km2] LFLASH-$
2 (I,J) Intra-cloud flash rate [flashes/min/km2] LFLASH-$
3 (I,J) Cloud-ground flash rate [flashes/min/km2] LFLASH-$

ND57: Potential temperature

ND57 Dimension POTENTIAL TEMPERATURE DIAGNOSTIC Units Category
1 (I,J,L) Potential temperature [K] THETA-$

ND58: CH4 emissions

ND58 Dimension CH4 EMISSIONS Units Category
1 (I,J) CH4-TOT: Total emissions [kg] CH4-EMIS
2 (I,J) CH4-GAO: Gas & Oil emissions [kg] CH4-EMIS
3 (I,J) CH4-COL: Coal emisisons [kg] CH4-EMIS
4 (I,J) CH4-LIV: Livestock emissions [kg] CH4-EMIS
5 (I,J) CH4-WST: Waste emisisons [kg] CH4-EMIS
6 (I,J) CH4-BFL: Biofuel emissions [kg] CH4-EMIS
7 (I,J) CH4-RIC: Rice field emissions [kg] CH4-EMIS
8 (I,J) CH4-OTA: Other anthropogenic emissions [kg] CH4-EMIS
9 (I,J) CH4-BBN: Biomass burning emissions [kg] CH4-EMIS
10 (I,J) CH4-WTL: Wetland emissions [kg] CH4-EMIS
11 (I,J) CH4-SAB: Soil absorption [kg] CH4-EMIS
12 (I,J) CH4-OTN: Other natural emissions [kg] CH4-EMIS

ND59: TOMAS size-resolved aerosol emissions

ND59 Dimension TOMAS SIZE-RESOLVED PRIMARY AEROSOL EMISSION Units Category
1 (I,J,L) Size-resolved primary aerosol number emission [No.] NK-EMISS
2 (I,J,L) Size-resolved primary aerosol sulfate mass emission [kg S] SF-EMIS
3 (I,J,L) Size-resolved primary aerosol sea-salt emission [kg] SS-EMIS
4 (I,J,L) Size-resolved primary Hydrophillic EC mass emission [kg] ECIL-SRC
5 (I,J,L) Size-resolved primary Hydrophobic EC mass emission [kg] ECOB-SRC
6 (I,J,L) Size-resolved primary Hydrophillic OC mass emission [kg] OCIL-SRC
7 (I,J,L) Size-resolved primary Hydropobic OC mass emission [kg] OCOB-SRC
8 (I,J,L) Size-resolved dust mass emission [kg] DUST-SRC

ND60

TOMAS simulations: Aerosol microphysics rate

ND60 Dimension TOMAS AEROSOL MICROPHYSICS RATE Units Category
1 (I,J,L) Condensation rate [no.] or [kg] TMS-COND
2 (I,J,L) Coagulation rate [no.] or [kg] TMS-COAG
3 (I,J,L) Nucleation rate [no.] or [kg] TMS-NUCL
4 (I,J,L) Aqueous oxidation rate [no.] or [kg] TMS-AQOX
5 (I,J,L) Accumulated error fixed [no.] or [kg] AERO-FIX
6 (I,J,L) SOA condensation rate [no.] or [kg] TMS-SOA

Non-TOMAS simulations: Wetland fraction

ND59 Dimension WETLAND FRACTION Units Category
1 (I,J) Wetland fraction unitless

ND61: TOMAS 3-D rate

ND61 Dimension TOMAS 3-D RATE Units Category
1 (I,J,L) Particle Dp >10 nm formation rate [cm-3s-1] TOMAS-3D
2 (I,J,L) Nucleation rate (cluster size) [cm-3s-1] TOMAS-3D

ND62: Instantaneous columns

ND61 Dimension INSTANTANEOUS COLUMN MAPS Units Category
1 (I,J,N) I-J instantaneous integrated column density for tracers [molec/cm2] or
[atoms C/cm2]
INST-MAP

ND63: Ship emission diagnostics

ND63 Dimension SHIP DIAGNOSTIC Units Category
1 (I,J) Fraction of NOx remaining unitless SHIP-$$$
2 (I,J) Integrated Ozone Production Efficiency (OPE) unitless SHIP-$$$
3 (I,J) Ship plume NOx remaining [molec/cm2/s] SHIP-$$$
4 (I,J) Ship plume Ox production [molec/cm2/s] SHIP-$$$
5 (I,J) Ship NOx emissions [molec/cm2/s] SHIP-$$$

ND64: Radiative flux

ND64 Dimension RADIATIVE FLUXES Units Category
1 (I,J,L) Net UV flux in bin [W/m2] FJX-FLUX
2 (I,J,L) Direct UV flux in bin [W/m2] FJX-FLUX
3 (I,J,L) Diffuse UV flux in bin [W/m2] FJX-FLUX

ND65: Chemcial production and loss diagnostics

ND65 Dimension PRODUCTION/LOSS OF SPECIFIED CHEMICAL FAMILIES Units Category
1 (I,J,L,N) Chemical family P/L rates. Users can define which species/ families to output in input.geos. [molec/cm3/s] PORL-L=$

ND66: GMAO 3-D met fields

ND66 Dimension 3-D MET FIELDS Units Category
1 (I,J,L) UWND : U-winds [m/s] DAO-3D-$
2 (I,J,L) VWND : V-winds [m/s] DAO-3D-$
3 (I,J,L) TMPU : Temperature [K] DAO-3D-$
4 (I,J,L) SPHU : Specific humidity [g H20/kg air] DAO-3D-$
5 (I,J,L) CLDMAS : Convective Mass Flux [kg/m2/s] DAO-3D-$
6 (I,J,L) DTRAIN : Detrainment Flux [kg/m2/s] DAO-3D-$

ND67: GMAO 2-D met fields

ND66 Dimension 2-D MET FIELDS Units Category
1 (I,J) HFLUX: sensible heat flux from surface [W/m2] DAO-FLDS
2 (I,J) RADSWG: solar radiation at the ground
For GEOS-5, this is the net radiation @ ground (SWGNET)
For MERRA, this is the incident radiation @ ground (SWGDN)
[W/m2] DAO-FLDS
3 (I,J) PREACC: total precipitation at the ground
For GEOS-5 and MERRA, this field is named PRECTOT
[mm/day] DAO-FLDS
4 (I,J) PRECON: total convective precipitation at the ground
For GEOS-5 and MERRA, this field is named PRECCON
[mm/day] DAO-FLDS
5 (I,J) TS: surface air temperature
For GEOS-4, GEOS-5, and MERRA, this is really the air temperature at 2 m altitude above the surface.
[K] DAO-FLDS
6 (I,J) RADSWT: solar radiation at the top of the atmosphere [W/m2] DAO-FLDS
7 (I,J) USTAR: friction velocity [m/s] DAO-FLDS
8 (I,J) Z0: surface roughness height [m] DAO-FLDS
9 (I,J) PBL (aka PBLM): planetary boundary layer depth [m] DAO-FLDS
10 (I,J) CLDFRC: column cloud fraction [0 - 1] DAO-FLDS
11 (I,J) U10M: U-winds at 10 meters altitude [m/s] DAO-FLDS
12 (I,J) V10M: V-winds at 10 meters altitude [m/s] DAO-FLDS
13 (I,J) PS-PBL: Boundary Layer Top Pressure [hPa] DAO-FLDS
14 (I,J) ALBD: Surface Albedo [unitless] DAO-FLDS
15 (I,J) PHIS: Geopotential Heights [m] DAO-FLDS
16 (I,J) CLTOP : Cloud Top Height [levels] DAO-FLDS
17 (I,J) TROPP: Tropopause pressure (read directly from the met fields, without any further processing). For more information see our dynamic tropopause wiki page. [hPa] DAO-FLDS
18 (I,J) SLP: Sea Level pressure (read directly from the met fields) [hPa] DAO-FLDS
19 (I,J) TSKIN : Ground / Sea Surface Temp [K] DAO-FLDS
20 (I,J) PARDF : Photosynthetically active diffuse radiation [W/m2] DAO-FLDS
21 (I,J) PARDR : Photosynthetically active direct radiation [W/m2] DAO-FLDS
22 (I,J) GWETTOP: Top soil wetness [unitless] DAO-FLDS

ND68: Air mass and related quantities

ND68 Dimension AIR MASS, BOX HEIGHTS, ETC. Units Category
1 (I,J,L) BXHEIGHT: Grid box heights [m] BXHGHT-$
2 (I,J,L) AD: Air mass in grid box [kg] BXHGHT-$
3 (I,J,L) AVGW : Mixing ratio of water vapor [v/v] BXHGHT-$
4 (I,J,L) N_AIR: Air number density [molec air/m3] BXHGHT-$

ND69: Surface areas

ND68 Dimension AIR MASS, BOX HEIGHTS, ETC. Units Category
1 (I,J) DXYP: grid box surface areas [m2] DXYP

ND70: Print debug output

ND68 Dimension DEBUG OUTPUT Units Category
Turn on debug output statements (Input_Opt%LPRT = T)

ND71: Print debug output

ND71 Dimension HOURLY MAX MIXING RATIO Units Category
1 (I,J,N) Hourly maximum tracer mixing ratio at the surface [v/v] IJ-MAX-$

ND72: RRTMG diagnostics

ND71 Dimension HOURLY MAX MIXING RATIO Units Category
1 (I,J,N) All-sky TOA short-wave radiation W/m2 RADMAP-$
2 (I,J,N) All-sky surface short-wave radiation W/m2 RADMAP-$
3 (I,J,N) All-sky TOA long-wave radiation W/m2 RADMAP-$
4 (I,J,N) All-sky surface long-wave radiation W/m2 RADMAP-$
5 (I,J,N) Clear-sky TOA short-wave radiation W/m2 RADMAP-$
6 (I,J,N) Clear-sky surface short-wave radiation W/m2 RADMAP-$
7 (I,J,N) Clear-sky TOA long-wave radiation W/m2 RADMAP-$
8 (I,J,N) Clear-sky surface long-wave radiation W/m2 RADMAP-$