History collections for advection and mixing
From Geos-chem
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- Overview of History diagnostics
- Legend for History diagnostics
- Collections for History diagnostics
- History collections for advection and mixing
- History collections for aerosols
- History collections for budgets
- History collections for chemistry and photolysis
- History collections for convection and wet deposition
- History collections for dry deposition
- History collections for met fields and related quantities
- History collections for mercury and POPs
- History collections for methane
- History collections for species concentrations
- History collections for TransportTracers
- Replicating the behavior of the prior timeseries diagnostics
- Adding new History diagnostics
The AdvFluxVert collection
Here is a sample definition section for the AdvFluxVert collection. This is used to get vertical fluxes of species in advection.
- If this collection is not already present in the HISTORY.rc file in the GEOS-Chem run directory for your selected simulation, you can copy and paste this into your HISTORY.rc file and edit accordingly.
- To prevent an individual field from being included in the diagnostic output, place a comment character # in front of the field name.
- Please see our Legend for History diagnostics page for more information about each of the collection tags.
#============================================================================== # %%%%% THE AdvFluxVert COLLECTION %%%%% # # GEOS-Chem vertical mass flux of species in kg/s (default = O3 only) # # Available for all simulations #============================================================================== AdvFluxVert.template: '%y4%m2%d2_%h2%n2z.nc4', AdvFluxVert.format: 'CFIO', AdvFluxVert.frequency: 00000100 000000 AdvFluxVert.duration: 00000100 000000 AdvFluxVert.mode: 'time-averaged' AdvFluxVert.fields: 'SpeciesConc_O3 ', 'GIGCchem', ::
This table describes the diagnostic quantities belonging to the AdvFluxVert collection:
Diagnostic name | Description | Units | Wildcards | Simulations | Notes |
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AdvFluxVert_<spcname> | Vertical flux of species in advection | kg/s | ?ADV? | Can be used with
Typically only used with
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--Bob Yantosca (talk) 18:00, 19 July 2019 (UTC)
The Transport collection
The Transport collection contains diagnostics for age of air. This is used for benchmarking purposes
Here is a sample definition section for the Transport collection.
- If this collection is not already present in the HISTORY.rc file in the GEOS-Chem run directory for your selected simulation, you can copy and paste this into your HISTORY.rc file and edit accordingly.
- To prevent an individual field from being included in the diagnostic output, place a comment character # in front of the field name.
- Please see our Legend for History diagnostics page for more information about each of the collection tags.
#============================================================================== # %%%%% THE Transport COLLECTION %%%%% # # Diagnostics for evaluating transport, including age of air [s] # # Available for all simulations #============================================================================== Transport.template: '%y4%m2%d2_%h2%n2z.nc4', Transport.format: 'CFIO', Transport.frequency: 'End', Transport.duration: 'End', Transport.mode: 'instantaneous' Transport.fields: 'Met_AgeOfAir ', 'GIGCchem', ::
This table describes the diagnostic quantities belonging to the Transport collection:
Diagnostic name | Description | Units | Wildcards | Simulations | Notes |
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Met_AgeOfAir | Age of air | years | Typically used with:
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