Difference between revisions of "GEOS-Chem diagnostic output files"
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'''''[[GEOS-Chem restart files|Previous]] | [[Guide_to_visualization_and_analysis_tools_for_GEOS-Chem|Next]] | [[Getting Started with GEOS-Chem]]''''' | '''''[[GEOS-Chem restart files|Previous]] | [[Guide_to_visualization_and_analysis_tools_for_GEOS-Chem|Next]] | [[Getting Started with GEOS-Chem]]''''' | ||
#[[Minimum system requirements for GEOS-Chem|Minimum system requirements]] | #[[Minimum system requirements for GEOS-Chem|Minimum system requirements]] | ||
+ | #[[Installing required software]] | ||
#[[Configuring your computational environment]] | #[[Configuring your computational environment]] | ||
#[[Downloading GEOS-Chem source code|Downloading source code]] | #[[Downloading GEOS-Chem source code|Downloading source code]] |
Revision as of 21:08, 20 November 2020
Previous | Next | Getting Started with GEOS-Chem
- Minimum system requirements
- Installing required software
- Configuring your computational environment
- Downloading source code
- Downloading data directories
- Creating run directories
- Configuring runs
- Compiling
- Running
- Output files
- Log files
- Restart files
- Diagnostic output files
- Visualizing and processing output
- Coding and debugging
- Further reading
On this page, we list the files that are generated by GEOS-Chem's various diagnostic packages.
Contents
History diagnostics output
The following files, which correspond to the default History diagnostic collections, will be created in the OutputDir/ folder in your GEOS-Chem run directory. You can prevent any of these files from being created by commenting out the collection name in the HISTORY.rc configuration file. You can also add your own new collections (i.e. requesting species concentrations for both time-averaged and instantaneous averaging modes) by updating HISTORY.rc. For more information, please see our Guide to GEOS-Chem History diagnostics.
In the table below, YYYYMMDD and hhmms corresponds to the simulation date and time at which the file was created. The z indicates UTC (sometimes called "Zulu" time).
History diagnostic file name | Format | Collection | Created by | Added/Removed |
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GEOSChem.AdvFluxVert.YYYYMMDD_hhmmz.nc4 | netCDF | AdvFluxVert |
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GEOSChem.AerosolMass.YYYYMMDD_hhmmz.nc4 | netCDF | AerosolMass |
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GEOSChem.Aerosols.YYYYMMDD_hhmmz.nc4 | netCDF | Aerosols |
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GEOSChem.BoundaryConditions.YYYYMMDD_hhmmz.nc4 | netCDF | BoundaryConditions |
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GEOSChem.Budget.YYYYMMDD_hhmmz.nc4 | netCDF | Budget |
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GEOSChem.CH4.YYYYMMDD_hhmmz.nc4 | netCDF | CH4 |
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GEOSChem.CloudConvFlux.YYYYMMDD_hhmmz.nc4 | netCDF | CloudConvFlux |
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GEOSChem.ConcAboveSfc.YYYYMMDD_hhmmz.nc4 | netCDF | ConcAboveSfc |
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GEOSChem.ConcAfterChem.YYYYMMDD_hhmmz.nc4 | netCDF | ConcAfterChem |
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GEOSChem.DryDep.YYYYMMDD_hhmmz.nc4 | netCDF | DryDep |
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GEOSChem.Jvalues.YYYYMMDD_hhmmz.nc4 | netCDF | JValues |
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GEOSChem.KppDiags.YYYYMMDD_hhmmz.nc4 | netCDF | KppDiags |
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GEOSChem.LevelEdgeDiags.YYYYMMDD_hhmmz.nc4 | netCDF | LevelEdgeDiags |
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GEOSChem.MercuryChem.YYYYMMDD_hhmmz.nc4 | netCDF | MercuryChem |
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GEOSChem.MercuryEmis.YYYYMMDD_hhmmz.nc4 | netCDF | MercuryEmis |
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GEOSChem.MercuryOcean.YYYYMMDD_hhmmz.nc4 | netCDF | MercuryOcean |
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GEOSChem.POPs.YYYYMMDD_hhmmz.nc4 | netCDF | POPs |
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GEOSChem.ProdLoss.YYYYMMDD_hhmmz.nc4 | netCDF | ProdLoss |
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GEOSChem.RadioNuclide.YYYYMMDD_hhmmz.nc4 | netCDF | RadioNuclide |
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GEOSChem.SpeciesConc.YYYYMMDD_hhmmz.nc4 | netCDF | SpeciesConc |
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GEOSChem.StateChm.YYYYMMDD_hhmmz.nc4 | netCDF | StateChm |
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GEOSChem.StateMet.YYYYMMDD_hhmmz.nc4 | netCDF | StateMet |
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GEOSChem.Transport.YYYYMMDD_hhmmz.nc4 | netCDF | Transport |
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GEOSChem.WetLossConv.YYYYMMDD_hhmmz.nc4 | netCDF | WetLossConv |
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GEOSChem.WetLossLS.YYYYMMDD_hhmmz.nc4 | netCDF | WetLossLS |
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--Bob Yantosca (talk) 16:13, 13 December 2019 (UTC)
HEMCO diagnostic ouptut
The HEMCO diagnostic output files will be created in the OutputDir/ folder in your GEOS-Chem run directory. For more information, please see our The HEMCO User's Guide: Diagnostics.
In the table below, YYYYMMDD and hhmms corresponds to the simulation date and time at which the file was created.
HEMCO diagnostic file name | Format | Collections | Created by |
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HEMCO_diagnostics.YYYYMMDDhhmm.nc | netCDF | Diagnostic quantities requested in HEMCO_Diagn.rc |
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--Bob Yantosca (talk) 16:07, 13 December 2019 (UTC)
Planeflight diagnostic output
NOTE: To use the Planeflight Diagnostic, you must compile GEOS-Chem with the BPCH_DIAG=y option.
By default, the planefight diagnostic output files will be created in your top-level run directory. You can change this setting by modifying the output file name setting in the Planeflight Menu of input.geos. For more information, please see our Planeflight diagnostic page.
In the table below, YYYYMMDD corresponds to the simulation date and time at which the file was created.
Planeflight diagnostic file name | Format | Collections | Created by |
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plane.log.YYYYMMDD | text | Point diagnostics requested in Planeflight.dat |
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--Bob Yantosca (talk) 16:34, 13 December 2019 (UTC)
ObsPack diagnostic output
By default, the ObsPack output files will be created in your top-level run directory. You can change this setting by modifying the output file name setting in the ObsPack Menu of input.geos. For more information, please see our ObsPack diagnostic page.
In the table below, YYYYMMDD and hhmms corresponds to the simulation date and time at which the file was created. The z indicates UTC (sometimes called "Zulu" time).
Obspack diagnostic file name | Format | Collections | Created by |
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GEOSChem.ObsPack.YYYYMMDD_hhmmz.nc4 | netCDF | Point diagnostics at locations specified in an ObsPack format netCDF file |
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--Bob Yantosca (talk) 16:41, 13 December 2019 (UTC)
Satellite timeseries diagnostic output in bpch format
NOTE: To use the satellite timeseries diagnostics, you must compile GEOS-Chem with the BPCH_DIAG=y option.
By default, the satellite timeseries files will be created in your top-level run directory. You can change by modifying the output file name setting in the ND51 MENU and/or ND51b MENU of input.geos.
In the table below, YYYYMMDD and hhmms corresponds to the simulation date and time at which the file was created.
Timeseries file name | Format | Collections | Created by |
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ts_satellite.YYYYMMDDhh.bpch | bpch | Diagnostics requested in the ND51 MENU and/or ND51b MENU of input.geos. |
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