Difference between revisions of "GEOS-Chem diagnostic output files"

From Geos-chem
Jump to: navigation, search
(History diagnostics output)
Line 23: Line 23:
 
== History diagnostics output ==
 
== History diagnostics output ==
  
The following files, which correspond to the default diagnostic collections, will be created in the <tt>OutputDir/</tt> folder in your GEOS-Chem run directory.  You can prevent any of these files by commenting out the collection name in the HISTORY.rc configuration file.  You can also add your own new collections (i.e. requesting species concentrations for both time-averaged and instantaneous averaging modes) by updating HISTORY.rc.
+
The following files, which correspond to the [[Collections_for_History_diagnostics|default History diagnostic collections]], will be created in the <tt>OutputDir/</tt> folder in your GEOS-Chem run directory.  You can prevent any of these files by commenting out the collection name in the HISTORY.rc configuration file.  You can also add your own new collections (i.e. requesting species concentrations for both time-averaged and instantaneous averaging modes) by updating HISTORY.rc.
  
 
For more information, please see our ''[[Guide to GEOS-Chem History diagnostics]]''.
 
For more information, please see our ''[[Guide to GEOS-Chem History diagnostics]]''.
  
  
 +
{| border=1 cellspacing=0 cellpadding=5
 +
|-valign="top" bgcolor="#CCCCCC"
 +
!width="400px"|Diagnostic file name
 +
!width="125px"|Collection
 +
!width="300px"|Can be used with
 +
!width="150px"|Added/Removed
  
 +
|-valign="top"
 +
|<tt>GEOSChem.AdvFluxVert.YYYYMMDD_hhmmz.nc4</tt>
 +
|[[History_collections_for_advection_and_mixing#The_AdvFluxVert_collection|AdvFluxVert]]
 +
|
 +
*all simulations
 +
Typically only used with
 +
*benchmark
 +
|
 +
*Added in [[GEOS-Chem 12#12.6.0|12.6.0]]
  
GEOSChem.AdvFluxVert.YYYYMMDD_hhmmz.nc4
+
|-valign="top"
GEOSChem.AerosolMass.YYYYMMDD_hhmmz.nc4
+
|<tt>GEOSChem.AerosolMass.YYYYMMDD_hhmmz.nc4</tt>
GEOSChem.Aerosols.YYYYMMDD_hhmmz.nc4
+
|[[History_collections_for_aerosols#The_AerosolMass_collection|AerosolMass]]
GEOSChem.BoundaryConditions.YYYYMMDD_hhmmz.nc4
+
|
GEOSChem.Budget.YYYYMMDD_hhmmz.nc4
+
*All full-chemistry simulations
GEOSChem.CH4.YYYYMMDD_hhmmz.nc4
+
*Aerosol-only simulations
GEOSChem.CloudConvFlux.YYYYMMDD_hhmmz.nc4
+
|
GEOSChem.ConcAboveSfc.YYYYMMDD_hhmmz.nc4
+
 
GEOSChem.ConcAfterChem.YYYYMMDD_hhmmz.nc4
+
 
GEOSChem.DryDep.YYYYMMDD_hhmmz.nc4
+
 
GEOSChem.Jvalues.YYYYMMDD_hhmmz.nc4
+
 
GEOSChem.KppDiags.YYYYMMDD_hhmmz.nc4
+
 
GEOSChem.LevelEdgeDiags.YYYYMMDD_hhmmz.nc4
+
|}
GEOSChem.MercuryChem.YYYYMMDD_hhmmz.nc4
+
 
GEOSChem.MercuryEmis..YYYYMMDD_hhmmz.nc4
+
 
GEOSChem.MercuryOcean.YYYYMMDD_hhmmz.nc4
+
 
GEOSChem.POPs.YYYYMMDD_hhmmz.nc4
+
<tt>GEOSChem.Aerosols.YYYYMMDD_hhmmz.nc4</tt>
GEOSChem.ProdLoss.YYYYMMDD_hhmmz.nc4
+
<tt>GEOSChem.BoundaryConditions.YYYYMMDD_hhmmz.nc4</tt>
GEOSChem.RadioNuclide.YYYYMMDD_hhmmz.nc4
+
<tt>GEOSChem.Budget.YYYYMMDD_hhmmz.nc4</tt>
GEOSChem.SpeciesConc.YYYYMMDD_hhmmz.nc4
+
<tt>GEOSChem.CH4.YYYYMMDD_hhmmz.nc4</tt>
GEOSChem.StateChm.YYYYMMDD_hhmmz.nc4
+
<tt>GEOSChem.CloudConvFlux.YYYYMMDD_hhmmz.nc4</tt>
GEOSChem.StateMet.YYYYMMDD_hhmmz.nc4
+
<tt>GEOSChem.ConcAboveSfc.YYYYMMDD_hhmmz.nc4</tt>
GEOSChem.Transport.YYYYMMDD_hhmmz.nc4
+
<tt>GEOSChem.ConcAfterChem.YYYYMMDD_hhmmz.nc4</tt>
GEOSChem.WetLossConv.YYYYMMDD_hhmmz.nc4
+
<tt>GEOSChem.DryDep.YYYYMMDD_hhmmz.nc4</tt>
GEOSChem.WetLossLS.YYYYMMDD_hhmmz.nc4
+
<tt>GEOSChem.Jvalues.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.KppDiags.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.LevelEdgeDiags.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.MercuryChem.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.MercuryEmis..YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.MercuryOcean.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.POPs.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.ProdLoss.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.RadioNuclide.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.SpeciesConc.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.StateChm.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.StateMet.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.Transport.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.WetLossConv.YYYYMMDD_hhmmz.nc4</tt>
 +
<tt>GEOSChem.WetLossLS.YYYYMMDD_hhmmz.nc4</tt>
  
 
----
 
----
 
'''''[[GEOS-Chem restart files|Previous]] | [[Guide_to_visualization_and_analysis_tools_for_GEOS-Chem|Next]] | [[Getting Started with GEOS-Chem]]'''''
 
'''''[[GEOS-Chem restart files|Previous]] | [[Guide_to_visualization_and_analysis_tools_for_GEOS-Chem|Next]] | [[Getting Started with GEOS-Chem]]'''''

Revision as of 15:09, 13 December 2019

Previous | Next | Getting Started with GEOS-Chem

  1. Minimum system requirements
  2. Downloading source code
  3. Downloading data directories
  4. Creating run directories
  5. Configuring runs
  6. Compiling
  7. Running
  8. Output files
  9. Visualizing and processing output
  10. Coding and debugging
  11. Further reading


Page is under construction.jpg

We will be adding some more information here shortly. In the meantime, please see our Guide to GEOS-Chem diagnostics for more information about files that are generated by the various GEOS_Chem diagnostics.

History diagnostics output

The following files, which correspond to the default History diagnostic collections, will be created in the OutputDir/ folder in your GEOS-Chem run directory. You can prevent any of these files by commenting out the collection name in the HISTORY.rc configuration file. You can also add your own new collections (i.e. requesting species concentrations for both time-averaged and instantaneous averaging modes) by updating HISTORY.rc.

For more information, please see our Guide to GEOS-Chem History diagnostics.


Diagnostic file name Collection Can be used with Added/Removed
GEOSChem.AdvFluxVert.YYYYMMDD_hhmmz.nc4 AdvFluxVert
  • all simulations

Typically only used with

  • benchmark
GEOSChem.AerosolMass.YYYYMMDD_hhmmz.nc4 AerosolMass
  • All full-chemistry simulations
  • Aerosol-only simulations




GEOSChem.Aerosols.YYYYMMDD_hhmmz.nc4 GEOSChem.BoundaryConditions.YYYYMMDD_hhmmz.nc4 GEOSChem.Budget.YYYYMMDD_hhmmz.nc4 GEOSChem.CH4.YYYYMMDD_hhmmz.nc4 GEOSChem.CloudConvFlux.YYYYMMDD_hhmmz.nc4 GEOSChem.ConcAboveSfc.YYYYMMDD_hhmmz.nc4 GEOSChem.ConcAfterChem.YYYYMMDD_hhmmz.nc4 GEOSChem.DryDep.YYYYMMDD_hhmmz.nc4 GEOSChem.Jvalues.YYYYMMDD_hhmmz.nc4 GEOSChem.KppDiags.YYYYMMDD_hhmmz.nc4 GEOSChem.LevelEdgeDiags.YYYYMMDD_hhmmz.nc4 GEOSChem.MercuryChem.YYYYMMDD_hhmmz.nc4 GEOSChem.MercuryEmis..YYYYMMDD_hhmmz.nc4 GEOSChem.MercuryOcean.YYYYMMDD_hhmmz.nc4 GEOSChem.POPs.YYYYMMDD_hhmmz.nc4 GEOSChem.ProdLoss.YYYYMMDD_hhmmz.nc4 GEOSChem.RadioNuclide.YYYYMMDD_hhmmz.nc4 GEOSChem.SpeciesConc.YYYYMMDD_hhmmz.nc4 GEOSChem.StateChm.YYYYMMDD_hhmmz.nc4 GEOSChem.StateMet.YYYYMMDD_hhmmz.nc4 GEOSChem.Transport.YYYYMMDD_hhmmz.nc4 GEOSChem.WetLossConv.YYYYMMDD_hhmmz.nc4 GEOSChem.WetLossLS.YYYYMMDD_hhmmz.nc4


Previous | Next | Getting Started with GEOS-Chem