List of diagnostics archived to bpch format
On this page we list the various diagnostic quantities that you can archive with GEOS-Chem. These diagnostic quantities are archived to "binary punch" (aka bpch) format.
NOTE: The bpch diagnostics will be preserved in GEOS-Chem 12. They will be removed in a future version.
Overview
The tables below list the following parameters for each diagnostic that is archived to bpch format:
NDxx # | The index for each slot of the given "NDxx" bpch diaggnostic. |
---|---|
Dims | Diagnostics are usually 2-D or 3-D, with I,J,L for longitude, latitude and level indices.
N as a third or fourth dimension refers to the number of species that a diagnostic can carry. |
Description | A short overview of the given diagnostic. |
Units | The physical units of the given diagnostic quantity |
Category | The 8-character name used by GAMAP to reference a particular diagnostic field. Information about how to set the different flags in the input.geos file can be found in the Diagnostic Menu section of our GEOS-Chem Input Files wiki page. |
Simulations | A list of simulations for which this particular diagnostic is valid. |
netCDF equivalent | The name under which the same diagnostic is available as netCDF output (in GEOS-Chem v11-02 and higher). See the List of diagnostics archived to netCDF format wiki page for more information. |
You can specify which diagnostic quantities you want to archive by modifying the various menus of the input.geos file, which is contained in your the GEOS-Chem run directory. The relevant menus of input.geos are:
ND01: Rn-Pb-Be sources
ND01 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | 222Rn emissions | kg/s | RN-SRCE | Rn-Pb-Be | EmisRn_Soil | Diagnostic is archived by HEMCO. netCDF output goes to the HEMCO_diagnostics*.nc files. |
2 | (I,J,L) | 210Pb emissions | kg/s | RN-SRCE | Rn-Pb-Be | PbfromRadDecay | |
3 | (I,J,L) | 7Be emissions | kg/s | RN-SRCE | Rn-Pb-Be | EmisBe_Cosmic | Diagnostic is archived by HEMCO. netCDF output goes to the HEMCO_diagnostics*.nc files. |
ND02: Rn-Pb-Be decay
ND02 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | 222Rn loss | kg/s | RN-DECAY | Rn-Pb-Be | RadDecay_Rn | |
2 | (I,J,L) | 210Pb loss | kg/s | RN-DECAY | Rn-Pb-Be | RadDecay_Pb | |
3 | (I,J,L) | 7Be loss | kg/s | RN-DECAY | Rn-Pb-Be | RadDecay_Be7 |
ND03: Mercury emissions and P/L
NOTE: The slots of the ND03 diagnostic were updated in GEOS-Chem 12.0.0. The bpch diagnostics are slated for removal in a future version of GEOS-Chem.
ND03 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
Hg emission diagnostics (HG-SRCE) | |||||||
1 | (I,J) | Anthropogenic Hg0 emission | kg | HG-SRCE | Hg tagHg |
EmisHg0anthro | |
2 | (I,J) | Total mass of oceanic Hg0 | kg | HG-SRCE | Hg tagHg |
MassHg0inOcean | |
3 | (I,J) | Oceanic emission of Hg0 | kg | HG-SRCE | Hg tagHg |
EmisHg0ocean | |
4 | (I,J) | Land reemission of Hg0 | kg | HG-SRCE | Hg tagHg |
EmisHg0land | |
5 | (I,J) | Land natural emission of Hg0 | kg | HG-SRCE | Hg tagHg |
EmisHg0geogenic | |
6 | (I,J) | Anthropogenic Hg2 emission | kg | HG-SRCE | Hg tagHg |
EmisHg2HgPanthro | |
7 | (I,J) | Total mass of oceanic Hg2 | kg | HG-SRCE | Hg tagHg |
MassHg2inOcean | |
8 | (I,J) | Mass of Hg2 sunk in the ocean | kg | HG-SRCE | Hg tagHg |
FluxHg2toDeepOcean | netCDF units: kg/s |
9 | (I,J) | Anthropogenic HgP emission | kg | HG-SRCE | Hg tagHg |
NOTE: HgP is now emitted into Hg2 | |
10 | (I,J) | Total oceanic mercury | kg | HG-SRCE | Hg tagHg |
MassHgTotalOcean | |
11 | (I,J) | Total mass of oceanic HgP | kg | HG-SRCE | Hg tagHg |
MassHgPinOcean | |
12 | (I,J) | Mass of organic carbon sunk in ocean | kg | HG-SRCE | Hg tagHg |
FluxOCtoDeepOcean | netCDF units: kg/s |
13 | (I,J) | Emissions from biomass burning | kg | HG-SRCE | Hg tagHg |
EmisHg0biomass | |
14 | (I,J) | Emissions from vegetation | kg | HG-SRCE | Hg tagHg |
EmisHg0vegetation | |
15 | (I,J) | Emissions from soils | kg | HG-SRCE | Hg tagHg |
EmisHg0soil | |
16 | (I,J) | Flux-up Hg0 volat from ocean | kg | HG-SRCE | Hg tagHg |
FluxHg0fromOceanToAir | netCDF units: kg/s |
17 | (I,J) | Flux-down Hg0 dry dep to ocean | kg | HG-SRCE | Hg tagHg |
FluxHg0fromAirToOcean | netCDF units: kg/s |
18 | (I,J) | Snow emission of Hg | kg | HG-SRCE | Hg tagHg |
EmisHg0snow | |
19 | (I,J) | Hg2 delivered to ocean from snowmelt | kg | HG-SRCE | Hg tagHg |
EmisHg2snowToOcean | netCDF units: kg/s |
20 | (I,J) | Hg2/HgP deposition to open ocean | kg | HG-SRCE | Hg tagHg |
FluxHg2HgPfromAirToOcean | netCDF units: kg/s |
21 | (I,J) | Hg2/HgP deposition to snow and ice | kg | HG-SRCE | Hg tagHg |
FluxHg2HgPfromAirToSnow | netCDF units: kg/s |
22 | (I,J) | Emission of Hg2 from rivers | kg | HG-SRCE | Hg tagHg |
EmisHg2rivers | |
Production of Hg2 and related quantities (PL-HG2-$) | |||||||
1 | (I,J,L) | Production of Hg2 from Hg0 | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromHg0 | |
2 | (I,J,L) | Production of Hg2 from rxn w/ OH | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromOH | |
3 | (I,J,L) | Production of Hg2 from rxn w/ O3 | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromO3 | |
4 | (I,J,L) | Loss of Hg2 from rxn w/ sea salt | kg | PL-HG2-$ | Hg tagHg |
LossHg2bySeaSalt | |
5 | (I,J,L) | Loss rate of Hg2 from rxn w/ sea salt | [s-1] | PL-HG2-$ | Hg tagHg |
LossRateHg2bySeaSalt | |
6 | (I,J,L) | Production of Hg2 from Br | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromBr | |
7 | (I,J,L) | Production of Hg2 from BrY | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromBrY | |
8 | (I,J,L) | Production of Hg2 from ClY | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromClY | |
9 | (I,J,L) | Br concentration | molec/cm3 | PL-HG2-$ | Hg tagHg |
ConcBr | |
10 | (I,J,L) | BrO concentration | molec/cm3 | PL-HG2-$ | Hg tagHg |
ConcBrO | |
11 | (I,J,L) | Particulate bound mercurfy | pptv | PL-HG2-$ | Hg tagHg |
ParticulateBoundHg | |
12 | (I,J,L) | Reactive gaseous mercury | pptv | PL-HG2-$ | Hg tagHg |
ReactiveGaseousHg | |
13 | (I,J,L) | Polar Br concentration | pptv | PL-HG2-$ | Hg tagHg |
PolarConcBr | |
14 | (I,J,L) | Polar BrO concentration | pptv | PL-HG2-$ | Hg tagHg |
PolarConcBrO | |
15 | (I,J,L) | Polar BrO3 concentration | pptv | PL-HG2-$ | Hg tagHg |
PolarConcBrO3 | |
16 | (I,J,L) | Production of Hg2 from HgBr + Br2 | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromHgBrPlusBr2 | |
17 | (I,J,L) | Production of Hg2 from HgBr + BrBrO | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromHgBrPlusBrBrO | |
18 | (I,J,L) | Production of Hg2 from HgBr + BrHO2 | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromHgBrPlusBrHO2 | |
19 | (I,J,L) | Production of Hg2 from HgBr + BrNO2 | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromHgBrPlusBrNO2 | |
20 | (I,J,L) | Production of Hg2 from HgBr + BrClO | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromHgBrPlusBrClO | |
21 | (I,J,L) | Production of Hg2 from HgBr + BrOH | kg | PL-HG2-$ | Hg tagHg |
ProdHg2fromHgBrPlusBrOH |
ND04: CO2 sources
NOTE: In GEOS-Chem 12.1.0 and higher, all of the CO2 diagnostics (with the exception of the CO2 chemical source) will be archived via HEMCO diagnostics.
ND04 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | CO2 fossil fuel emiss | [atoms C/cm2/s] | CO2-SRCE | CO2 | Replaced by HEMCO diagnostics in GEOS-Chem 12.1.0 | |
2 | (I,J) | CO2 ocean emissions | [atoms C/cm2/s] | CO2-SRCE | CO2 | " " | |
3 | (I,J) | CO2 balanced biosphere | [atoms C/cm2/s] | CO2-SRCE | CO2 | " " | |
4 | (I,J) | CO2 biomass burning emiss | [atoms C/cm2/s] | CO2-SRCE | CO2 | " " | |
5 | (I,J) | CO2 biofuel emission | [atoms C/cm2/s] | CO2-SRCE | CO2 | " " | |
6 | (I,J) | CO2 net terrestrial exchange | [atoms C/cm2/s] | CO2-SRCE | CO2 | " " | |
7 | (I,J) | CO2 ship emissions | [atoms C/cm2/s] | CO2-SRCE | CO2 | " " | |
8 | (I,J,L) | CO2 aircraft emissions | [atoms C/cm2/s] | CO2-SRCE | CO2 | " " | |
9 | (I,J,L) | CO2 chemical source | [atoms C/cm2/s] | CO2-SRCE | CO2 | Changed to tracer #1 in GEOS-Chem 12.1.0 | |
10 | (I,J) | CO2 chemical source surface correction | [atoms C/cm2/s] | CO2-SRCE | CO2 | Replaced by HEMCO diagnostics in GEOS-Chem 12.1.0 |
ND05: P/L for sulfate aerosols
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND05 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | P(SO2) from DMS + OH |
[kg S] | PL-SUL=$ | aerosol | ProdSO2fromDMSandOH | Units are [kg S/s] in netCDF output |
2 | (I,J,L) | P(SO2) from DMS + NO3 | [kg S] | PL-SUL=$ | aerosol | ProdSO2fromDMSandNO3 | Units are [kg S/s] in netCDF output |
3 | (I,J,L) | Total P(SO2) from DMS | [kg S] | PL-SUL=$ | aerosol | ProdSO2fromDMS | Units are [kg S/s] in netCDF output |
4 | (I,J,L) | P(MSA) from DMS | [kg S] | PL-SUL=$ | aerosol | ProdMSAfromDMS | Units are [kg S/s] in netCDF output |
5 | (I,J,L) | P(SO4) from the gas phase | [kg S] | PL-SUL=$ | aerosol | ProdSO4fromGasPhase | Units are [kg S/s] in netCDF output |
6 | (I,J,L) | P(SO4) from aqueous oxidation of H2O2 in clouds | [kg S] | PL-SUL=$ | aerosol all fullchem |
ProdSO4fromH2O2inCloud | Units are [kg S/s] in netCDF output |
7 | (I,J,L) | P(SO4) from aqueous oxidation of O3 in clouds | [kg S] | PL-SUL=$ | aerosol all fullchem |
ProdSO4fromO3inCloud | Units are [kg S/s] in netCDF output |
8 | (I,J,L) | P(SO4) from aqueous oxidation of O2 in clouds (metal catalyzed) | [kg S] | PL-SUL=$ | aerosol all fullchem |
ProdSO4fromO2inCloudMetal | New in 12.0.0 Units are [kg S/s] in netCDF output |
9 | (I,J,L) | P(SO4) from O3 on sea salt aerosols | [kg S] | PL-SUL=$ | aerosol all fullchem |
ProdSO4fromO3inSeaSAlt | Units are [kg S/s] in netCDF output |
10 | (I,J,L) | L(OH) by DMS | [kg OH] | PL-SUL=$ | aerosol | Removed in 12.0.0 | NOTE: This diagnostic is zero everywhere, because a fixed OH field is read from disk for aerosol-only simulations. |
11 | (I,J,L) | L(NO3) by DMS | [kg NO3] | PL-SUL=$ | aerosol | Removed in 12.0.0 | NOTE: This diagnostic is zero everywhere, because a fixed NO3 field is read from disk for aerosol-only simulations |
12 | (I,J,L) | P(SO4) from oxidation on dust aerosols | [kg S] | PL-SUL=$ | aciduptake | ProdSO4fromOxidationOnDust | Units are [kg S/s] in netCDF output |
13 | (I,J,L) | P(NIT) from HNO3 uptake on dust | [kg N] | PL-SUL=$ | aciduptake | ProdNITfromHNO3UptakeOnDust | Units are [kg N/s] in netCDF output |
14 | (I,J,L) | P(SO4) from uptake of H2SO4(g) | [kg N] | PL-SUL=$ | aciduptake | ProdSO4fromUptakeOfH2SO4g | Units are [kg N/s] in netCDF output |
15 | (I,J,L) | L(HNO3) on sea salt aerosols | [kg N] | PL-SUL=$ | aerosol all fullchem |
LossHNO3onSeaSalt | Units are [kg N/s] in netCDF output |
16 | (I,J,L) | P(SO4) from aqueous oxidation with HOBr in clouds | [kg S] | PL-SUL=$ | all fullchem | ProdSO4fromHOBrInCloud | New in 12.0.0 Units are [kg S/s] in netCDF output |
17 | (I,J,L) | P(SO4) from by SRO3 | [kg S] | PL-SUL=$ | aerosol all fullchem |
ProdSO4fromSRO3 | New in 12.0.0 Units are [kg S/s] in netCDF output |
18 | (I,J,L) | P(SO4) from SRHOBr | [kg S] | PL-SUL=$ | all fullchem | ProdSO4fromSRHOBr | New in 12.0.0 Units are [kg S/s] in netCDF output |
19 | (I,J,L) | P(SO4) by O3s | [kg S] | PL-SUL=$ | aerosol all fullchem |
ProdSO4fromO3s | New in 12.0.0 Units are [kg S/s] in netCDF output |
ND06: Dust emissions
ND06 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | DST1 (Dust aerosol, Reff = 0.7 microns) | [kg] | DUSTSRCE | all simulations | EmisDST1_Natural | Diagnostic is archived by HEMCO. netCDF output goes to the HEMCO_diagnostics*.nc files. |
2 | (I,J) | DST2 (Dust aerosol, Reff = 1.4 microns) | [kg] | DUSTSRCE | all simulations | EmisDST2_Natural | " " |
3 | (I,J) | DST3 (Dust aerosol, Reff = 2.4 microns) | [kg] | DUSTSRCE | all simulations | EmisDST3_Natural | " " |
4 | (I,J) | DST4 (Dust aerosol, Reff = 4.5 microns) | [kg] | DUSTSRCE | all simulations | EmisDST4_Natural | " " |
ND07: BC and OC sources
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND07 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | BLACK CARBON from anthro sources | [kg] | BC-ANTH | all fullchem aerosol |
||
2 | (I,J) | BLACK CARBON from biomass burning | [kg] | BC-BIOB | all fullchem aerosol |
||
3 | (I,J) | BLACK CARBON from biofuels | [kg] | BC-BIOF | all fullchem aerosol |
||
4 | (I,J,L) | Hydrophilic BC from Hydrophobic BC | [kg] | PL-BC=$ | all fullchem aerosol |
ProdBCPIfromBCPO | |
5 | (I,J) | ORGANIC CARBON from anthro sources | [kg] | OC-ANTH | all fullchem aerosol |
||
6 | (I,J) | ORGANIC CARBON from biomass burning | [kg] | OC-BIOB | all fullchem aerosol |
||
7 | (I,J) | ORGANIC CARBON from biofuels | [kg] | OC-BIOF | all fullchem aerosol |
||
8 | (I,J) | ORGANIC CARBON from biogenic sources | [kg] | OC-BIOG | all fullchem aerosol |
||
9 | (I,J,L) | Hydrophilic OC from Hydrophobic OC | [kg] | PL-OC=$ | all fullchem aerosol |
ProdOCPIfromOCPO |
ND07 diagnostic quantities for SOA simulations
NOTE: All complex SOA refers to all simulations that use the Complex SOA option (i.e. benchmark, complexSOA, complexSOA_SVPOA).
ND07 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
10 | (I,J) | ORGANIC CARBON : a-pinene, b-pinene, sabinene, carene source | [kg] | OC-MTPA | all complex SOA | ||
11 | (I,J) | ORGANIC CARBON : limonene source | [kg] | OC-LIMO | all complex SOA | ||
12 | (I,J) | ORGANIC CARBON : terpinene, terpinolene, myrcene, ocimene, other monoterpenes source | [kg] | OC-MTPO | all fullchem aerosol |
||
13 | (I,J) | ORGANIC CARBON : sesquiterpene source | [kg] | OC-SESQ | all complex SOA | ||
15 | (I,J,L) | SOA produced from monoterpenes + sesquiterpenes | [kg] | PL-OC=$ | all complex SOA | ||
16 | (I,J,L) | SOA produced from isoprene | [kg] | PL-OC=$ | all complex SOA | ||
17 | (I,J,L) | SOA produced from light aromatics and IVOCs | [kg] | PL-OC=$ | all complex SOA | ||
18 | (I,J,L) | SOA produced from primary SVOCs | [kg] | PL-OC=$ | all complex SOA | ||
19 | (I,J,L) | SOA produced from POG + OH reaction | [kg] | PL-OC=$ | all complex SOA | ||
20 | (I,J,L) | SOAG production from GLYX in aerosol | [kg] | SOAGM=$ | all complex SOA | none | Removed in 12.0.0 |
21 | (I,J,L) | SOAM production from MGLY in aerosol | [kg] | SOAGM=$ | all complex SOA | none | Removed in 12.0.0 |
22 | (I,J,L) | SOAG production from GLYX in cloud | [kg] | SOAGM=$ | all complex SOA | none | Removed in 12.0.0 |
23 | (I,J,L) | SOAM production from MGLY in cloud | [kg] | SOAGM=$ | all complex SOA | none | Removed in 12.0.0 |
ND08: Sea salt emissions
ND08 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | Accumulation mode seasalt | [kg] | SALTSRCE | all simulations | EmisSALA_Natural | Diagnostic is archived by HEMCO. netCDF output goes to the HEMCO_diagnostics*.nc files. |
2 | (I,J) | Coarse mode seasalt | [kg] | SALTSRCE | all simulations | EmisSALC_Natural | " " |
ND09: HCN and CH3CN sources and sinks
NOTE: The HCN/CH3CN simulation has been removed from GEOS-Chem, thus rendering this diagnostic obsolete. A new HCN/CH3CN simulation may be added to GEOS-Chem sometime in the future.
ND11: Acetone sources and sinks
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND11 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | Acetone source from MONOTERPENES | [at C/cm2/s] | ACETSRCE | all fullchem | EmisACET_Monoterp | Archived to HEMCO_diagnostic*.nc files |
2 | (I,J) | Acetone source from METHYL BUTENOL | [at C/cm2/s] | ACETSRCE | all fullchem | EmisACET_MethylBut | " " |
3 | (I,J) | Acetone source from DIRECT BIOGENIC EMISSION | [at C/cm2/s] | ACETSRCE | all fullchem | EmisACET_Biogenic | " " |
4 | (I,J) | Acetone source from OCEANS | [at C/cm2/s] | ACETSRCE | all fullchem | EmisACET_Ocean | " " |
5 | (I,J) | Acetone sink from OCEANS | [at C/cm2/s] | ACETSRCE | all fullchem |
ND12: PBL diagnostics
NOTE: It appears that the implementation of HEMCO has disabled this diagnostic.
ND13: Sulfur emissions
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND13 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | Biogenic DMS | [kg S] | DMS-BIOG | all fullchem aerosol |
||
2 | (I,J,L) | Aircraft SO2 (1 <= L <= ND13) | [kg S] | SO2-AC-$ | all fullchem aerosol |
||
3 | (I,J,L) | Anthropognic SO2 (1 <= L <= 2 ) | [kg S] | SO2-AN-$ | all fullchem aerosol |
||
4 | (I,J) | Biomass SO2 | [kg S] | SO2-BIOB | all fullchem aerosol |
||
5 | (I,J) | Biofuel SO2 | [kg S] | SO2-BIOF | all fullchem aerosol |
||
6 | (I,J,L) | Non-eruptive volcano SO2 (1 <= L <= ND13) | [kg S] | SO2-NV-$ | all fullchem aerosol |
||
7 | (I,J,L) | Eruptive volcano SO2 (1 <= L <= ND13) | [kg S] | SO2-EV-$ | all fullchem aerosol |
||
8 | (I,J) | Ship SO2 | [kg S] | SO2-SHIP | all fullchem aerosol |
||
9 | (I,J,L) | Anthropogenic SO4 (1 <= L <= 2 ) | [kg S] | SO4-AN-$ | all fullchem aerosol |
||
10 | (I,J) | Biofuel SO4 | [kg S] | SO4-BIOF | all fullchem aerosol |
||
11 | (I,J) | Natural NH3 | [kg S] | NH3-NATU | all fullchem aerosol |
||
12 | (I,J) | Anthropogenic NH3 | [kg] | NH3-AN-$ | all fullchem aerosol |
||
13 | (I,J) | Biomass NH3 | [kg] | NH3-BIOB | all fullchem aerosol |
||
14 | (I,J) | Biofuel NH3 | [kg] | NH3-BIOF | all fullchem aerosol |
ND14: Convective mass flux
ND14 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L,N) | Mass change due to cloud convection | [kg/s] | CV-FLX-$ | all simulations | CloudConvFlux_?ADV? | Mostly superseded by netCDF budget diagnostics |
ND15: Boundary layer mixing mass flux
ND15 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L,N) | Mass change due to boundary-layer mixing | [kg/s] | TURBMC-$ | all simulations | None yet | Mostly superseded by netCDF budget diagnostics |
ND16: Precipitation fractions
ND16 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | Fraction of grid box having rainout + washout (large-scale precip) | [unitless] | WD-FRC-$ | all simulations | None yet | This diagnostic cannot be replicated easily in netCDF output. Will postpone implementation until at least v11-03. |
2 | (I,J,L) | Fraction of grid box having rainout + washout (convectvive precip) | [unitless] | WD-FRC-$ | all simulations | None yet | Slot #2 of ND16 is always zero for GEOS-FP and MERRA-2, because GEOS-Chem only considers large-scale wet deposition when using these met data products. |
ND17: Rainout fraction
ND17 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L,N) | Fraction of soluble tracer lost to rainout (large-scale precip) | [unitless] | WD-LSR-$ | all simulations | None yet | This diagnostic cannot be replicated easily in netCDF output. Will postpone implementation until at least v11-03. |
2 | (I,J,L,N) | Fraction of soluble tracer lost to rainout (convective precip) | [unitless] | WD-CVR-$ | all simulations | None yet | Slot #2 of ND17 is always zero for GEOS-FP and MERRA-2. This is because GEOS-Chem only considers large-scale wet deposition when using these met data products. |
ND18: Washout fraction
ND18 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L,N) | Fraction of soluble tracer lost to washout (large-scale precip) | [unitless] | WD-LSW-$ | all simulations | None yet | This diagnostic cannot be replicated easily in netCDF output. Will postpone implementation until at least v11-03. |
2 | (I,J,L,N) | Fraction of soluble tracer lost to washout (convective precip) | [unitless] | WD-CVW-$ | all simulations | None yet | Slot #2 of ND18 is always zero for GEOS-FP and MERRA-2. This is because GEOS-Chem only considers large-scale wet deposition when using these met data products. |
ND19: CH4 loss
NOTE: This diagnostic only applies to the CH4 specialty simulation. The bpch diagnostic output is slated to be removed in a future version of GEOS-Chem.
ND19 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | CH4 removal by OH in troposphere | kg | CH4-LOSS | CH4 | LossCH4byOHinTrop | netCDF added in 12.1.0, in units of kg/s |
2 | (I,J,L) | CH4 removal in stratosphere | kg | CH4-LOSS | CH4 | LossCH4inStrat | " " |
3 | (I,J,L) | CH4 removal by Cl in troposphere | kg | CH4-LOSS | CH4 | LossCH4byClinTrop | " " |
ND20: Save O3 P/L rates
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND20 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | O3 production rates | [kg/m3/s] | PORL-L=$ | all fullchem | Prod_O3 | Prod_O3 units are molec/cm3/s. Unit conversion may be needed if you want to use this to drive a tagO3 simulation. |
2 | (I,J,L) | O3 loss rates | [1/m3/s] | PORL-L=$ | all fullchem | Loss_O3 | Loss_O3 units are molec/cm3/s. Unit conversion may be needed if you want to use this to drive a tagO3 simulation. |
ND21: Cloud diagnostics
NOTE: Some of the netcdf diagnostic names include an asterisk. Also asterisked diagnostics contain WL1, WL2, or WL3 which are replaced with the 1st, 2nd, or 3rd AOD wavelengths respectively in the input.geos Radiation menu at run-time.
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
NOTE: UCX fullchem refers to all full-chemistry simulations that use UCX (i.e. benchmark, standard, aciduptake, marinePOA).
ND21 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | OPTD: Cloud optical depth | [unitless] | OD-MAP-$ | all fullchem aerosol |
Met_OptD | Stored in State_Met%OPTD |
2 | (I,J,L) | CLDTOT: 3-D total cloud fraction (GEOS-4) | unitless] | OD-MAP-$ | all fullchem aerosol |
Met_CldF | Stored in State_Met%CLDF |
4 | (I,J,L) | OPD: Mineral dust optical depth for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDust | |
5 | (I,J,L) | SD: Mineral dust surface area | [cm2/cm3] | OD-MAP-$ | all fullchem aerosol |
AerSurfAreaDust | |
6 | (I,J,L) | OPSO4: Sulfate optical depth for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL1nm_SO4* | ?HYG? wildcard |
7 | (I,J,L) | HGSO4: Hygroscopic growth of SO4 | [unitless] | OD-MAP-$ | all fullchem aerosol |
AerHygroscopicGrowth_SO4 | ?HYG? wildcard |
8 | (I,J,L) | SSO4: Sulfate surface area | [cm2/cm3] | OD-MAP-$ | all fullchem aerosol |
AerSurfArea_SO4 | May use the ?HYG? wildcard |
9 | (I,J,L) | OPBC: Black carbon optical depth for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL1nm_BCPI* | ?HYG? wildcard |
10 | (I,J,L) | HGBC: Hygroscopic growth of BC | [unitless] | OD-MAP-$ | all fullchem aerosol |
AerHygroscopicGrowth_BCPI | ?HYG? wildcard |
11 | (I,J,L) | SBC: Black carbon surface area | [cm2/cm3] | OD-MAP-$ | all fullchem aerosol |
AerSurfArea_BCPI | May use the ?HYG? wildcard |
12 | (I,J,L) | OPOC: Organic carbon optical depth for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL1nm_OCPI* | ?HYG? wildcard |
13 | (I,J,L) | HGOC: Hygroscopic growth of OC | [unitless] | OD-MAP-$ | all fullchem aerosol |
AerHygroscopicGrowth_OCPI | ?HYG? wildcard |
14 | (I,J,L) | SOC: Organic carbon surface area | [cm2/cm3] | OD-MAP-$ | all fullchem aerosol |
AerSurfArea_OCPI | May use the ?HYG? wildcard |
15 | (I,J,L) | OPSSa: Sea salt (accumulation mode) optical depth for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL1nm_SALA* | ?HYG? wildcard |
16 | (I,J,L) | HGSSa: Hygroscopic growth of SSa | [unitless] | OD-MAP-$ | all fullchem aerosol |
AerHygroscopicGrowth_SALA | ?HYG? wildcard |
17 | (I,J,L) | SSSa: Sea salt (accumulation mode) surface area | [cm2/cm3] | OD-MAP-$ | all fullchem aerosol |
AerSurfArea_SALA | ?HYG? wildcard |
18 | (I,J,L) | OPSSc: Sea salt (coarse mode) optical depth for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL1nm_SALC* | ?HYG? wildcard |
19 | (I,J,L) | HGSSc: Hygroscopic growth of SSc | [unitless] | OD-MAP-$ | all fullchem aerosol |
AerHygroscopicGrowth_SALC | ?HYG? wildcard |
20 | (I,J,L) | SSSc: Sea salt (coarse mode) surface area | [cm2/cm3] | OD-MAP-$ | all fullchem aerosol |
AerSurfArea_SALC | ?HYG? wildcard |
21 | (I,J,L) | OPD1: Dust bin 1 AOD for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL1nm_bin1* | ?DUSTBIN? wildcard |
22 | (I,J,L) | OPD2: Dust bin 2 AOD for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL1nm_bin2* | ?DUSTBIN? wildcard |
23 | (I,J,L) | OPD3: Dust bin 3 AOD for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL1nm_bin3* | ?DUSTBIN? wildcard |
24 | (I,J,L) | OPD4: Dust bin 4 AOD for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL1nm_bin4* | ?DUSTBIN? wildcard |
25 | (I,J,L) | OPD5: Dust bin 5 AOD for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL1nm_bin5* | ?DUSTBIN? wildcard |
26 | (I,J,L) | OPD6: Dust bin 6 AOD for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL1nm_bin6* | ?DUSTBIN? wildcard |
27 | (I,J,L) | OPD7: Dust bin 7 AOD for 1st wavelength specified in Radiation Menu | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL1nm_bin7* | ?DUSTBIN? wildcard |
28 | (I,J,L) | OPSO4: Sulfate optical depth for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL2nm_SO4* | ?HYG? wildcard |
29 | (I,J,L) | OPBC: Black carbon optical depth for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL2nm_BCPI* | ?HYG? wildcard |
30 | (I,J,L) | OPOC: Organic carbon optical depth for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL2nm_OCPI* | ?HYG? wildcard |
31 | (I,J,L) | OPSSa: Accum. sea salt optical depth for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL2nm_SALA* | ?HYG? wildcard |
32 | (I,J,L) | OPSSc: Coarse sea salt optical depth for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL2nm_SALC* | ?HYG? wildcard |
33 | (I,J,L) | OPD1:Dust bin 1 AOD for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL2nm_bin1* | ?DUSTBIN? wildcard |
34 | (I,J,L) | OPD2: Dust bin 2 AOD for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL2nm_bin2* | ?DUSTBIN? wildcard |
35 | (I,J,L) | OPD3: Dust bin 3 AOD for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL2nm_bin3* | ?DUSTBIN? wildcard |
36 | (I,J,L) | OPD4: Dust bin 4 AOD for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL2nm_bin4* | ?DUSTBIN? wildcard |
37 | (I,J,L) | OPD5: Dust bin 5 AOD for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL2nm_bin5* | ?DUSTBIN? wildcard |
38 | (I,J,L) | OPD6: Dust bin 6 AOD for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL2nm_bin6* | ?DUSTBIN? wildcard |
39 | (I,J,L) | OPD7: Dust bin 7 AOD for 2nd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL2nm_bin7* | ?DUSTBIN? wildcard |
40 | (I,J,L) | OPSO4: Sulfate optical depth for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL3nm_SO4* | ?HYG? wildcard |
41 | (I,J,L) | OPBC: Black carbon optical depth for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL3nm_BCPI* | ?HYG? wildcard |
42 | (I,J,L) | OPOC: Organic carbon optical depth for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL3nm_OCPI* | ?HYG? wildcard |
43 | (I,J,L) | OPSSa: Accum. sea salt optical depth for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL3nm_SALA* | ?HYG? wildcard |
44 | (I,J,L) | OPSSc: Coarse sea salt optical depth for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODHygWL3nm_SALC* | ?HYG? wildcard |
45 | (I,J,L) | OPD1:Dust bin 1 AOD for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL3nm_bin1* | ?DUSTBIN? wildcard |
46 | (I,J,L) | OPD2:Dust bin 2 AOD for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL3nm_bin2* | ?DUSTBIN? wildcard |
47 | (I,J,L) | OPD3: Dust bin 3 AOD for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL3nm_bin3* | ?DUSTBIN? wildcard |
48 | (I,J,L) | OPD4: Dust bin 4 AOD for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL3nm_bin4* | ?DUSTBIN? wildcard |
49 | (I,J,L) | OPD5: Dust bin 5 AOD for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL3nm_bin5* | ?DUSTBIN? wildcard |
50 | (I,J,L) | OPD6: Dust bin 6 AOD for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL3nm_bin6* | ?DUSTBIN? wildcard |
51 | (I,J,L) | OPD7: Dust bin 7 AOD for 3rd wavelength specified in Radiation Menu (optional) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODDustWL3nm_bin7* | ?DUSTBIN? wildcard |
52 | (I,J,L) | ODSLA: Stratospheric liquid aerosol optical depth (600 nm) (UCX simulation only) | [unitless] | OD-MAP-$ | all fullchem aerosol |
AODStratLiquidAerWL1nm* | |
(I,J,L) | Stratospheric liquid aerosol optical depth | [unitless] | OD-MAP-$ | UCX fullchem | AODStratLiquidAerWL2nm* | Not in bpch output for v11-01 & later versions | |
(I,J,L) | Stratospheric liquid aerosol optical depth | [unitless] | OD-MAP-$ | UCX fullchem | AODStratLiquidAerWL3nm* | Not in bpch output for v11-01 & later versions | |
53 | (I,J,L) | SASLA: Stratospheric liquid aerosol surface area | [cm2/cm3] | OD-MAP-$ | UCX fullchem | AerSurfAreaStratLiquid | |
54 | (I,J,L) | NDSLA: Stratospheric liquid aerosol number density | [num/cm3] | OD-MAP-$ | UCX fullchem | AerNumDensitryStratLiquid | |
55 | (I,J,L) | ODSPA: Polar stratospheric cloud type 1a/2 optical depth (600 nm) (UCX simulation only) | [unitless] | OD-MAP-$ | UCX fullchem | AODPolarStratCloudWL1nm* | |
(I,J,L) | Polar stratospheric cloud type 1a/2 optical depth | [unitless] | OD-MAP-$ | UCX fullchem | AODPolarStratCloudWL3nm* | Not in bpch output for v11-01 & later versions | |
56 | (I,J,L) | SASPA: Polar stratospheric cloud type 1a/2 surface area | [cm2/cm3] | OD-MAP-$ | UCX fullchem | AerSurfAreaPolarStratCloud | |
57 | (I,J,L) | NDSPA: Stratospheric particulate aerosol number density | [num/cm3] | OD-MAP-$ | UCX fullchem | AerNumDensitryStratParticulate | |
58 | (I,J,L) | ISOPAOD: SOA from aqueous isoprene optical depth | [unitless] | OD-MAP-$ | benchmark complexSOA* |
AODSOAfromAqIsopreneWL1* | New in 12.0.0 |
(I,J,L) | SOA from aqueous isoprene optical depth | [unitless] | OD-MAP-$ | benchmark complexSOA* |
AODSOAfromAqIsopreneWL2* | Not in bpch output for v11-01 & later versions | |
(I,J,L) | SOA from aqueous isoprene optical depth | [unitless] | OD-MAP-$ | benchmark complexSOA* |
AODSOAfromAqIsopreneWL3* | Not in bpch output for v11-01 & later versions | |
59 | (I,J,L) | AQAVOL: Aqueous aerosol volume | [cm3/cm3] | OD-MAP-$ | all fullchem aerosol |
AerAqueousVolume | New in 12.0.0 |
ND22: Photolysis diagnostics
NOTE: Users must specify the GEOS-Chem index, not the ND22 index, for ND22 in the Diagnostic Menu of input.geos.
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND22 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | J(NO2) | [1/s] | JV-MAP-$ | all fullchem | Jval_NO2 or JNoon_NO2 |
|
2 | (I,J,L) | J(HNO3) | [1/s] | JV-MAP-$ | all fullchem | Jval_HNO3 or JNoon_HNO3 | |
3 | (I,J,L) | J(H2O2) | [1/s] | JV-MAP-$ | all fullchem | Jval_H2O2 or JNoon_H2O2 | |
4 | (I,J,L) | J(CH2O) | [1/s] | JV-MAP-$ | all fullchem | Jval_CH2O or JNoon_CH2O | |
5 | (I,J,L) | J(O3) | [1/s] | JV-MAP-$ | all fullchem | Jval_O3 or JNoon_O3 | |
6 | (I,J,L) | J(O3P) (standard and UCX simulations) OR or OH source from O3 photolysis (tropchem and SOA simulations) | [1/s] | JV-MAP-$ | all fullchem | Jval_O1D or JNoon_O1d or Jval_O3O1DA or JNoon_O3O1DB | |
9 | (I,J,L) | J(BrO) | [1/s] | JV-MAP-$ | all fullchem | Jval_BrO or JNoon_BrO | |
10 | (I,J,L) | J(HOBr) | [1/s] | JV-MAP-$ | all fullchem | Jval_HOBr or JNoon_HOBr | |
11 | (I,J,L) | J(BrNO2) | [1/s] | JV-MAP-$ | all fullchem | Jval_BrNO2 or JNoon_BrNO2 | |
12 | (I,J,L) | J(BrNO3) | [1/s] | JV-MAP-$ | all fullchem | Jval_BrNO3 or JNoon_?PHO? | |
13 | (I,J,L) | J(CHBr3) | [1/s] | JV-MAP-$ | all fullchem | Jval_CHBr3 or JNoon_CHBr3 | |
14 | (I,J,L) | J(Br2) | [1/s] | JV-MAP-$ | all fullchem | Jval_Br2 or JNoon_Br2 | |
15 | (I,J,L) | J(O2) | [1/s] | JV-MAP-$ | all fullchem | Jval_O2 or JNoon_O2 | |
16 | (I,J,L) | J(N2O) | [1/s] | JV-MAP-$ | all fullchem | Jval_N2O or JNoon_N2O | |
17 | (I,J,L) | J(NO) | [1/s] | JV-MAP-$ | all fullchem | Jval_NO or JNoon_NO | |
18 | (I,J,L) | J(NO3) | [1/s] | JV-MAP-$ | all fullchem | Jval_NO3 or JNoon_NO3 | |
19 | (I,J,L) | J(CFC11) | [1/s] | JV-MAP-$ | all fullchem | Jval_CFC11 or JNoon_CFC11 | |
20 | (I,J,L) | J(CFC12) | [1/s] | JV-MAP-$ | all fullchem | Jval_CFC12 or JNoon_CFC12 | |
21 | (I,J,L) | J(CCl4) | [1/s] | JV-MAP-$ | all fullchem | Jval_CCl4 or JNoon_CCl4 | |
22 | (I,J,L) | J(CH3Cl) | [1/s] | JV-MAP-$ | all fullchem | Jval_CH3Cl or JNoon_?PHO? | |
23 | (I,J,L) | J(ACET) | [1/s] | JV-MAP-$ | all fullchem | Jval_ACET or JNoon_ACET | |
24 | (I,J,L) | J(ALD2) | [1/s] | JV-MAP-$ | all fullchem | Jval_ALD2 or JNoon_ALD2 | |
25 | (I,J,L) | J(MVK) | [1/s] | JV-MAP-$ | all fullchem | Jval_MVK or JNoon_MVK | |
26 | (I,J,L) | J(MACR) | [1/s] | JV-MAP-$ | all fullchem | Jval_MACR or JNoon_MACR | |
27 | (I,J,L) | J(HAC) | [1/s] | JV-MAP-$ | all fullchem | Jval_HAC or JNoon_HAC | |
28 | (I,J,L) | J(GLYC) | [1/s] | JV-MAP-$ | all fullchem | Jval_GLYC or JNoon_GLYC | |
29 | (I,J,L) | J(PIP) | [1/s] | JV-MAP-$ | all fullchem | Jval_PIP or JNoon_PIP | |
30 | (I,J,L) | J(IPMN) | [1/s] | JV-MAP-$ | all fullchem | Jval_IPMN or JNoon_IPMN | |
31 | (I,J,L) | J(ETHLN) | [1/s] | JV-MAP-$ | all fullchem | Jval_ETHLN or JNoon_ETHLN | |
32 | (I,J,L) | J(DJDM) | [1/s] | JV-MAP-$ | all fullchem | Jval_DHDN or JNoon_DHDN | |
33 | (I,J,L) | J(HPALD) | [1/s] | JV-MAP-$ | all fullchem | Jval_HPALD or JNoon_HPALD | |
34 | (I,J,L) | J(ISN1) | [1/s] | JV-MAP-$ | all fullchem | Jval_ISN1 or JNoon_ISN1 | |
35 | (I,J,L) | J(MONITS) | [1/s] | JV-MAP-$ | all fullchem | Jval_MONITS or JNoon_MONITS | |
36 | (I,J,L) | J(MONITU) | [1/s] | JV-MAP-$ | all fullchem | Jval_MONITU or JNoon_MONITU | |
37 | (I,J,L) | J(HONIT) | [1/s] | JV-MAP-$ | all fullchem | Jval_HONIT or JNoon_JHONIT | |
38 | (I,J,L) | J(CH3Br) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCH3Br or JNoon_JCH3Br | |
39 | (I,J,L) | J(BrCl) | [1/s] | JV-MAP-$ | all fullchem | Jval_JBrCl or JNoon_JBrCl | |
40 | (I,J,L) | J(CH2Br2) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCH2Br2 or JNoon_JCH2Br2 | |
41 | (I,J,L) | J(CH2IBr) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCH2IBr or JNoon_JCH2IBr | |
42 | (I,J,L) | J(IBr) | [1/s] | JV-MAP-$ | all fullchem | Jval_JIBr or JNoon_JIBr | |
43 | (I,J,L) | J(Cl2) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCl2 or JNoon_JCl2 | |
44 | (I,J,L) | J(ClO) | [1/s] | JV-MAP-$ | all fullchem | Jval_JClO or JNoon_JClO | |
45 | (I,J,L) | J(OClO) | [1/s] | JV-MAP-$ | all fullchem | Jval_JOClO or JNoon_JOClO | |
46 | (I,J,L) | J(Cl2O2) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCl2O2 or JNoon_JCl2O2 | |
47 | (I,J,L) | J(ClNO2) | [1/s] | JV-MAP-$ | all fullchem | Jval_JClNO2 or JNoon_JClNO2 | |
48 | (I,J,L) | J(ClNO3) | [1/s] | JV-MAP-$ | all fullchem | Jval_JClNO3 or JNoon_JClNO3 | |
49 | (I,J,L) | J(HOCl) | [1/s] | JV-MAP-$ | all fullchem | Jval_JHOCl or JNoon_JHOCl | |
50 | (I,J,L) | J(CH3CCl3) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCH3CCl3 or JNoon_JCH3CCl3 | |
51 | (I,J,L) | J(CFC113) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCFC113 or JNoon_JCFC113 | |
52 | (I,J,L) | J(CFC114) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCFC114 or JNoon_JCFC114 | |
53 | (I,J,L) | J(CFC115) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCFC115 or JNoon_JCFC115 | |
54 | (I,J,L) | J(HCFC123) | [1/s] | JV-MAP-$ | all fullchem | Jval_JHCFC123 or JNoon_JHCFC123 | |
55 | (I,J,L) | J(HCFC141b) | [1/s] | JV-MAP-$ | all fullchem | Jval_JHCFC141b or JNoon_JHCFC141b | |
56 | (I,J,L) | J(HCFC142b) | [1/s] | JV-MAP-$ | all fullchem | Jval_JHCFC142b or JNoon_JHCFC142b | |
57 | (I,J,L) | J(HCFC22) | [1/s] | JV-MAP-$ | all fullchem | Jval_JHCFC22 or JNoon_JHCFC22 | |
58 | (I,J,L) | J(H1211) | [1/s] | JV-MAP-$ | all fullchem | Jval_JH1211 or JNoon_JH1211 | |
59 | (I,J,L) | J(ClOO) | [1/s] | JV-MAP-$ | all fullchem | Jval_JClOO or JNoon_JClOO | |
60 | (I,J,L) | J(CH2Cl2) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCH2Cl2 or JNoon_JCH2Cl2 | |
61 | (I,J,L) | J(CH2ICl) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCH2ICl or JNoon_JCH2ICl | |
62 | (I,J,L) | J(ICl) | [1/s] | JV-MAP-$ | all fullchem | Jval_JICl or JNoon_JICl | |
63 | (I,J,L) | J(I2) | [1/s] | JV-MAP-$ | all fullchem | Jval_JI2 or JNoon_JI2 | |
64 | (I,J,L) | J(HOI) | [1/s] | JV-MAP-$ | all fullchem | Jval_JHOI or JNoon_JHOI | |
65 | (I,J,L) | J(IO) | [1/s] | JV-MAP-$ | all fullchem | Jval_JIO or JNoon_JIO | |
66 | (I,J,L) | J(OIO) | [1/s] | JV-MAP-$ | all fullchem | Jval_JOIO or JNoon_JOIO | |
67 | (I,J,L) | J(INO) | [1/s] | JV-MAP-$ | all fullchem | Jval_JINO or JNoon_JINO | |
68 | (I,J,L) | J(IONO) | [1/s] | JV-MAP-$ | all fullchem | Jval_JIONO or JNoon_JIONO | |
69 | (I,J,L) | J(IONO2) | [1/s] | JV-MAP-$ | all fullchem | Jval_JIONO2 or JNoon_JIONO2 | |
70 | (I,J,L) | J(I2O2) | [1/s] | JV-MAP-$ | all fullchem | Jval_JI2O2 or JNoon_JI2O2 | |
71 | (I,J,L) | J(CH3I) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCH3I or JNoon_JCH3I | |
72 | (I,J,L) | J(CH2I2) | [1/s] | JV-MAP-$ | all fullchem | Jval_JCH2I2 or JNoon_JCH2I2 | |
73 | (I,J,L) | J(I2O4) | [1/s] | JV-MAP-$ | all fullchem | Jval_JI2O4 or JNoon_JI2O4 | |
74 | (I,J,L) | J(I2O3) | [1/s] | JV-MAP-$ | all fullchem | Jval_JI2O3 or JNoon_JI2O3 | |
75 | (I,J,L) | J(H1301) | [1/s] | JV-MAP-$ | all fullchem | Jval_JH1301 or JNoon_JH1301 | |
76 | (I,J,L) | J(H2402) | [1/s] | JV-MAP-$ | all fullchem | Jval_JH2402 or JNoon_JH2402 |
ND23: Mean OH
This diagnostic prints directly to stdout (which is redirected to the GEOS-Chem log file).
ND24 - ND26: Mass transport flux
For more information about how these diagnostics are defined, please see our Mass Flux (ND24/25/26) wiki page.
ND24 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
ND24 | (I,J,L,N) | East/west mass flux by transport | [kg/s] | EW-FLX-$ | all simulations | AdvFluxZonal | Mostly superseded by netCDF budget diagnostics |
ND25 | (I,J,L,N) | North/south mass flux by transport | [kg/s] | NS-FLX-$ | all simulations | AdvFluxMerid | " " |
ND26 | (I,J,L,N) | Up/down mass flux by transport | [kg/s] | UP-FLX-$ | all simulations | AdvFluxVert | " " |
ND28: Biomass burning emissions
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND28 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | NO biomass emissions | [molec/cm2/s] | BIOBSRCE | all fullchem | EmisNO_BioBurn | Diagnostic is archived by HEMCO. netCDF output goes to the HEMCO_diagnostics*.nc files. |
4 | (I,J) | CO biomass emissions | [molec/cm2/s] | BIOBSRCE | all fullchem tagCO |
EmisCO_BioBurn | " " |
5 | (I,J) | ALK4 biomass emissions | [atoms C/cm2/s] | BIOBSRCE | all fullchem | EmisALK4_BioBurn | " " |
9 | (I,J) | ACET biomass emissions | [atoms C/cm2/s] | BIOBSRCE | all fullchem | EmisACET_BioBurn | " " |
10 | (I,J) | MEK biomass emissions | [atoms C/cm2/s] | BIOBSRCE | all fullchem | EmisMEK_BioBurn | " " |
11 | (I,J) | ALD2 biomass emissions | [atoms C/cm2/s] | BIOBSRCE | all fullchem | EmisALD2_BioBurn | " " |
18 | (I,J) | PRPE (lumped >=C3 alkenes) biomass emissions | [atoms C/cm2/s] | BIOBSRCE | all fullchem CO2 CH4 tagCO aerosol |
EmisPRPE_BioBurn | " " |
19 | (I,J) | C3H8 biomass emissions | [atoms C/cm2/s] | BIOBSRCE | all fullchem | EmisC3H8_BioBurn | " " |
20 | (I,J) | CH2O biomass emissions | [molec/cm2/s] | BIOBSRCE | all fullchem | EmisCH2O_BioBurn | " " |
21 | (I,J) | C2H6 biomass emissions | [atoms C/cm2/s] | BIOBSRCE | all fullchem | EmisC2H6_BioBurn | " " |
26 | (I,J) | SO2 biomass emissions | [molec/cm2/s] | BIOBSRCE | all fullchem aerosol |
EmisSO2_BioBurn | " " |
30 | (I,J) | NH3 biomass emissions | [molec/cm2/s] | BIOBSRCE | all fullchem aerosol |
EmisNH3_BioBurn | " " |
34 | (I,J) | BC (black carbon) biomass emissions | [molec/cm2/s] | BIOBSRCE | all fullchem aerosol |
EmisBC_BioBurn | " " |
35 | (I,J) | OC (organic carbon) biomass emissions | [molec/cm2/s] | BIOBSRCE | all fullchem aerosol |
EmisOC_BioBurn | " " |
69 | (I,J) | CH4 biomass emissions | [molec/cm2/s] | BIOBSRCE | all fullchem CH4 |
EmisCH4_BioBurn | " " |
ND29: CO sources
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND29 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | CO from anthropogenic emissions | [molec/cm2/s] | CO--SRCE | all fullchem tagCO |
EmisCO_Anthro | Diagnostic is archived by HEMCO. netCDF output goes to the HEMCO_diagnostics*.nc files. |
2 | (I,J) | CO from biomass burning emissions | [molec/cm2/s] | CO--SRCE | all fullchem tagCO |
EmisCO_BioBurn | " " |
3 | (I,J) | CO from biofuel burning emissions | [molec/cm2/s] | CO--SRCE | all fullchem tagCO |
EmisCO_BioFuel | " " |
4 | (I,J) | CO produced from methanol (currently not defined) | [molec/cm2/s] | CO--SRCE | all fullchem tagCO |
none | |
5 | (I,J) | CO produced from monoterpenes | [molec/cm2/s] | CO--SRCE | all fullchem tagCO |
none | |
6 | (I,J) | CO from ship emissions | [molec/cm2/s] | CO--SRCE | all fullchem tagCO |
EmisCO_Ship | Diagnostic is archived by HEMCO. netCDF output goes to the HEMCO_diagnostics*.nc files. |
For tagged CO simulations only: | |||||||
7 | (I,J) | CO from anthropogenic + biofuel emissions over the US | [molec/cm2/s] | CO--SRCE | tagCO | Only available in bpch | |
8 | (I,J) | CO from aircraft emissions over the US | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
9 | (I,J) | CO from ship emissions over the US | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
10 | (I,J) | CO from anthropogenic + biofuel emissions over Europe | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
11 | (I,J) | CO from aircraft emissions over Europe | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
12 | (I,J) | CO from ship emissions over Europe | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
13 | (I,J) | CO from anthropogenic + biofuel emissions over SE Asia | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
14 | (I,J) | CO from aircraft emissions over SE Asia | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
15 | (I,J) | CO from ship emissions over SE Asia | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
16 | (I,J) | CO from anthropogenic + biofuel emissions elsewhere | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
17 | (I,J) | CO from aircraft emissions elsewhere | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
18 | (I,J) | CO from ship emissions elsewhere | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
19 | (I,J) | CO from biomass burning emissions over South America | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
20 | (I,J) | CO from biomass burning emissions over Africa | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
21 | (I,J) | CO from biomass burning emissions over SE Asia | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
22 | (I,J) | CO from biomass burning emissions over Oceania | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
23 | (I,J) | CO from biomass burning emissions over Europe | [molec/cm2/s] | CO--SRCE | tagCO | " " | |
24 | (I,J) | CO from biomass burning emissions elsewhere | [molec/cm2/s] | CO--SRCE | tagCO | " " |
ND30: Land map
ND30 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | GMAO land-water indices | [unitless] | LANDMAP |
ND31: Pressure at model edges
ND31 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | Pressure at the bottom of level L (1 <= L <= ND31 ) |
[hPa] | PEDGE-$ | all simulations | Met_PEDGE | Met_PEDGE must be placed in a netCDF collection where the data is placed on level edges. |
ND32: NO emissions
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND32 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | NO aircraft emissions | [molec/cm2/s] | NO-AC-$ | all fullchem | EmisNO_Aircraft | Diagnostic is archived by HEMCO. netCDF output goes to the HEMCO_diagnostics*.nc files. |
2 | (I,J) | NO anthropogenic emissions (includes ship) | [molec/cm2/s] | NO-AN-$ | all fullchem | EmisNO_Anthro | " " |
3 | (I,J) | NO biomass burning emissions | [molec/cm2/s] | NO-BIOB | all fullchem | EmisNO_BioBurn | " " |
4 | (I,J) | NO biofuel burning emissions | [molec/cm2/s] | NO-BIOF | all fullchem | EmisNO_Biofuel | " " |
5 | (I,J) | NO fertilizer emissions | [molec/cm2/s] | NO-FERT | all fullchem | EmisNO_Fert | " " |
6 | (I,J,L) | NO lightning emissions | [molec/cm2/s] | NO-LI-$ | all fullchem | EmisNO_Lightning | " " |
7 | (I,J) | NO soil emissions | [molec/cm2/s] | NO-SOIL | all fullchem | EmisNO_Soil | " " |
ND34: Biofuel emissions
NOTE: Many of the emissions inventories read into GEOS-Chem by the HEMCO emissions component lump biofuel emissions together with anthropogenic emissions. For such inventories, the contributions from biofuels will be included in the ND36 anthropogenic emissions diagnostic.
ND34 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | NO biofuel emissions | [molec/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisNO_Biofuel | Diagnostic is archived by HEMCO. netCDF output goes to the HEMCO_diagnostics*.nc files. |
4 | (I,J) | CO biofuel emissions | [molec/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisCO_Biofuel | " " |
5 | (I,J) | ALK4 biofuel emissions | [atoms C/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisALK4_Biofuel | " " |
9 | (I,J) | ACET biofuel emissions | [atoms C/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisACET_Biofuel | " " |
10 | (I,J) | MEK biofuel emissions | [atoms C/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisMEK_Biofuel | " " |
11 | (I,J) | ALD2 biofuel emissions | [atoms C/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisALD2_Biofuel | " " |
18 | (I,J) | PRPE (lumped >=C3 alkenes) biofuel emissions | [atoms C/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisPRPE_Biofuel | " " |
19 | (I,J) | C3H8 biofuel emissions | [atoms C/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisC3H8_Biofuel | " " |
20 | (I,J) | CH2O biofuel emissions | [molec/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisCH2O_Biofuel | " " |
21 | (I,J) | C2H6 biofuel emissions | [atoms C/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisC2H6_Biofuel | " " |
26 | (I,J) | SO2 biofuel emissions | [molec/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisSO2_Biofuel | " " |
30 | (I,J) | NH3 biofuel emissions | [molec/cm2/s] | BIOFSRCE | all simulations except: RnPbBe tagO3 |
EmisNH3_Biofuel | " " |
ND36: Anthropogenic emissions
ND36 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | NO anthropogenic emissions | [molec/cm2/s] | ANTHSRCE | all simulations except: RnPbBe tagO3 |
EmisNO_Anthro | Diagnostic is archived by HEMCO. netCDF output goes to the HEMCO_diagnostics*.nc files. |
4 | (I,J) | CO anthropogenic emissions | [molec/cm2/s] | ANTHSRCE | all simulations except: RnPbBe tagO3 |
EmisCO_Anthro | " " |
5 | (I,J) | ALK4 anthropogenic emissions | [atoms C/cm2/s] | ANTHSRCE | all simulations except: RnPbBe tagO3 |
EmisALK4_Anthro | " " |
9 | (I,J) | ACET anthropogenic emissions | [atoms C/cm2/s] | ANTHSRCE | all simulations except: RnPbBe tagO3 |
EmisACET_Anthro | " " |
10 | (I,J) | MEK anthropogenic emissions | [atoms C/cm2/s] | ANTHSRCE | all simulations except: RnPbBe tagO3 |
EmisMEK_Anthro | " " |
11 | (I,J) | ALD2 anthropogenic emissions | [atoms C/cm2/s] | ANTHSRCE | all simulations except: RnPbBe tagO3 |
EmisALD2_Anthro | " " |
18 | (I,J) | PRPE (lumped >=C3 alkenes) anthropogenic emissions | [atoms C/cm2/s] | ANTHSRCE | all simulations except: RnPbBe tagO3 |
EmisPRPE_Anthro | " " |
19 | (I,J) | C3H8 anthropogenic emissions | [atoms C/cm2/s] | ANTHSRCE | all simulations except: RnPbBe tagO3 |
EmisC3H8_Anthro | " " |
20 | (I,J) | CH2O anthropogenic emissions | [molec/cm2/s] | ANTHSRCE | all simulations except: RnPbBe tagO3 |
EmisCH2O_Anthro | " " |
21 | (I,J) | C2H6 anthropogenic emissions | [atoms C/cm2/s] | ANTHSRCE | all simulations except: RnPbBe tagO3 |
EmisC2H6_Anthro | " " |
69 | (I,J) | CH4 anthropogenic emissions | [atoms C/cm2/s] | ANTHSRCE | all simulations except: RnPbBe tagO3 |
EmisCH4_Anthro | " " |
ND37: Fraction of species scavenged in updrafts
ND37 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L,N) | Fraction of tracer scavenged by in cloud updrafts in moist convection | [unitless] | MC-FRC-$ | all simulations with soluble species | WetLossConvFrac_?WET? | NOTE: Had been inadvertently removed in v10, v11. Bpch and netCDF diagnostics both restored in v11-02. |
ND38: Loss of species by convection
ND38 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L,N) | Rainout loss of tracer in convective updrafts | [kg/s] | WETDCV-$ | all simulations with soluble species | WetLossConv_?WET? |
ND39: Loss of species by rainout and washout
ND39 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L,N) | Loss of species in large-scale precip | [kg/s] | WETDLS-$ | all | WetLossLS_?WET? |
ND40: Plane flight diagnostic
This diagnostic does not save to the bpch file, but rather is output to the specified plane.log file. See the Planeflight menu for more information.
ND41: Afternoon PBL height
ND0 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | Afternoon boundary layer heights (1200-1600 local time) | [m] | PBLDEPTH | all simulations | None | Not being output to netCDF in 12.0.0 |
ND42: Aerosol mass and PM2.5 diagnostics
NOTE: Some outputs are only defined when the Complex SOA option is turned on (e.g. in benchmark, complexSOA, and complexSOA_SVPOA simulations).
ND0 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | TSOA: Aerosol products of terpene oxidation | [ug/m3] | IJ-SOA-$ | benchmark complexSOA complexSOA_SVPOA |
AerMassTSOA | |
2 | (I,J,L) | ISOA: Aerosol products of isoprene oxidation | [ug/m3] | IJ-SOA-$ | benchmark complexSOA complesSOA_SVPOA |
AerMassISOA | |
3 | (I,J,L) | ASOA: Aerosol products of light aromatics + IVOC oxidation | [ug/m3] | IJ-SOA-$ | benchmark complexSOA complesSOA_SVPOA |
AerMassASOA | |
4 | (I,J,L) | POA: Aerosols from SVOCs | [ug/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
AerMassPOA | |
5 | (I,J,L) | OPOA: Aerosol products of POG oxidation | [ug/m3] | IJ-SOA-$ | complexSOA_SVPOA | AerMassOPOA | |
6 | (I,J,L) | Sum of all organic aerosol | [ug/m3] | IJ-SOA-$ | aerosol benchmark standard tropchem complexSOA complexSOA_SVPOA |
TotalOA | |
7 | (I,J,L) | Sum of all organic carbon | [ug/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
TotalOC | |
8 | (I,J,L) | Sum of all biogenic organic aerosol | [ug/m3] | IJ-SOA-$ | benchmark complexSOA complexSOA_SVPOA |
TotalBiogenicOA | |
9 | (I,J,L) | BetaNO: NO branching ratio | [ug C/m3] | IJ-SOA-$ | benchmark complexSOA complexSOA_SVPOA |
BetaNO | |
10 | (I,J,L) | POA: Aerosols from SVOCs | [ug C/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
none | NetCDF output not included in v11-02 |
11 | (I,J,L) | OPOA: Aerosol products of POG oxidation | [ug C/m3] | IJ-SOA-$ | complexSOA_SVPOA | none | NetCDF output not included in v11-02 |
12 | (I,J,L) | OC: Organic carbon (OCPI + OCPO) | [ug C/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
none | NetCDF output not included in v11-02 |
13 | (I,J,L) | BC: Black carbon (BCPI + BCPO) | [ug C/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
AerMassBC | |
14 | (I,J,L) | SO4: Sulfate | [ug/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
AerMassSO4 | |
15 | (I,J,L) | NH4: Ammonium | [ug/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
AerMassNH4 | |
16 | (I,J,L) | NIT: Nitrate | [ug/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
AerMassNIT | |
17 | (I,J,L) | SAL: Sea salt aerosol (SALA + SALC) | [ug/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
AerMassSAL | |
18 | (I,J,L) | PM2.5: Particulate matter | [ug/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
PM25 | |
19 | (I,J,L) | SOAGX: Aerosol-phase glyoxal | [ug/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
AerMassSOAGX | New in 12.0.0 |
20 | (I,J,L) | SOAMG: Aerosol-phase methylglyoxal | [ug/m3] | IJ-SOA-$ | benchmark standard tropchem complexSOA complexSOA_SVPOA |
AerMassSOAMG | New in 12.0.0 |
21 | (I,J,L) | SOAIE: Aerosol-phase IEPOX | [ug/m3] | IJ-SOA-$ | benchmark complexSOA complexSOA_SVPOA |
AerMassSOAIE | New in 12.0.0 |
22 | (I,J,L) | SOAME: Aerosol-phase IMAE | [ug/m3] | IJ-SOA-$ | benchmark complexSOA complexSOA_SVPOA |
AerMassSOAME | New in 12.0.0 |
23 | (I,J,L) | INDIOL: Generic aerosol-phase organonitrate hydrolysis product | [ug/m3] | IJ-SOA-$ | benchmark complexSOA complexSOA_SVPOA |
AerMassINDIOL | New in 12.0.0 |
24 | (I,J,L) | LVOCOA: Aerosol-phase low-volatility non-IEPOX product of ISOPOOH (RIP) oxidation | [ug/m3] | IJ-SOA-$ | benchmark complexSOA complexSOA_SVPOA |
AerMassLVOCOA | New in 12.0.0 |
25 | (I,J,L) | ISN1OA: Aerosol-phase 2nd generation hydroxynitrates formed from ISOP+NO3 reaction pathway | [ug/m3] | IJ-SOA-$ | benchmark complexSOA complexSOA_SVPOA |
AerMassISN1OA | New in 12.0.0 |
ND43: Chemical production of OH and HO2
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
NOTE: UCX fullchem refers to all full-chemistry simulations that use UCX (i.e. benchmark, standard, aciduptake, marinePOA).
ND43 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | OH | [molec/cm3] | CHEM-L=$ | all fullchem CH4 |
OHconcAfterChem | |
3 | (I,J,L) | HO2 | [v/v] | CHEM-L=$ | all fullchem | HO2concAfterChem | |
4 | (I,J,L) | O1D | [molec/cm3] | CHEM-L=$ | UCX fullchem | O1DconcAfterChem | |
5 | (I,J,L) | O3P | [molec/cm3] | CHEM-L=$ | UCX fullchem | O3PconcAfterChem | |
6 | (I,J,L) | LBRO2H | [molec/cm3] | CHEM-L=$ | none | Obsolete; removed in 12.0.0 | |
7 | (I,J,L) | LBRO2N | [molec/cm3] | CHEM-L=$ | none | Obsolete; removed in 12.0.0 | |
8 | (I,J,L) | LTRO2H | [molec/cm3] | CHEM-L=$ | none | Obsolete; removed in 12.0.0 | |
9 | (I,J,L) | LTRO2N | [molec/cm3] | CHEM-L=$ | none | Obsolete; removed in 12.0.0 | |
10 | (I,J,L) | LXRO2H | [molec/cm3] | CHEM-L=$ | none | Obsolete; removed in 12.0.0 | |
11 | (I,J,L) | LXRO2N | [molec/cm3] | CHEM-L=$ | none | Obsolete; removed in 12.0.0 |
ND44: Dry deposition diagnostics
ND44 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,M) | Dry deposition fluxes (M = 1, State_Chm%nDryDep) | [molec/cm2/s] | DRYD-FLX | all simulations with dry-depositing species | DryDep_?DRY? | |
2 | (I,J,M) | Dry deposition velocities (M = 1, State_Chm%nDryDep) | [cm/s] | DRYD-VEL | all simulations with dry-depositing species | DryDepVel_?DRY? |
ND45: Species concentrations
ND45 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L,N) | Species mixing ratio for Levels = 1, LD45, averaged between HR1_OTH and HR2_OTH (time range from input.geos) | [v/v] | IJ-AVG-$ | all simulations | SpeciesConc_?ADV? SpeciesConc_?AER? SpeciesConc_?ALL? SpeciesConc_?DRY? SpeciesConc_?FIX? SpeciesConc_?GAS? SpeciesConc_?KPP? SpeciesConc_?PHO? SpeciesConc_?VAR? SpeciesConc_?WET? |
For more information about the various wildcards that can be used with the SpeciesConc netCDF diagnostic, please see this wiki post. |
ND46: Biogenic emissions
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND0 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | ISOP: Isoprene | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisISOP_Biogenic | Diagnostic is archived by HEMCO. netCDF output goes to the HEMCO_diagnostics*.nc files. |
2 | (I,J) | ACET: Acetone | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisACET_Biogenic | " " |
3 | (I,J) | PRPE: Lumped >= C3 alkenes | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisPRPE_Biogenic | " " |
4 | (I,J) | MONX: Total monoterpenes (APIN + BPIN + LIMO + SABI + MYRC + CARE + OCIM + OMON) |
[atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisMONX_Biogenic | " " |
5 | (I,J) | MBOX: Methyl Butenol | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisMBOX_Biogenic | " " |
6 | (I,J) | C2H4: Ethene | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisC2H4_Biogenic | " " |
7 | (I,J) | APIN: a-Pinene | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisAPIN_Biogenic | " " |
8 | (I,J) | BPIN: b-Pinene | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisBPIN_Biogenic | " " |
9 | (I,J) | LIMO: Limonene | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisLIMO_Biogenic | " " |
10 | (I,J) | SABI: Sabinene | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisSABI_Biogenic | " " |
11 | (I,J) | MYRC: Myrcene | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisMYRC_Biogenic | " " |
12 | (I,J) | CARE: 3-Carene | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisCARE_Biogenic | " " |
13 | (I,J) | OCIM: Ocimene | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisOCIM_Biogenic | " " |
14 | (I,J) | FAXX: Formic acid (currently not activated) | [molec/cm2/s] | BIOGSRCE | all fullchem | EmisFAXX_Biogenic | " " |
15 | (I,J) | AAXX: Acetic acid (currently not activated) | [molec/cm2/s] | BIOGSRCE | all fullchem | EmisAAXX_Biogenic | " " |
16 | (I,J) | ALD2: Acetaldehyde | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisALD2_Biogenic | " " |
17 | (I,J) | OMON: Other monoterpenes | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisOMON_Biogenic | " " |
18 | (I,J) | MOHX: Methanol (currently not activated) | [molec/cm2/s] | BIOGSRCE | all fullchem | EmisMOHX_Biogenic | " " |
19 | (I,J) | ETOH: Ethanol (currently not activated) | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisETOH_Biogenic | " " |
20 | (I,J) | FARN: Farnesene | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisFARN_Biogenic | " " |
21 | (I,J) | BCAR: b-Caryophyllene | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisBCAR_Biogenic | " " |
22 | (I,J) | OSQT: Other sesquiterpenes | [atoms C/cm2/s] | BIOGSRCE | all fullchem | EmisOSQT_Biogenic | " " |
23 | (I,J) | CHBr3: Ocean bromoform emissions | [kg/m2/s] | BIOGSRCE | all fullchem | EmisCHBr3_Biogenic | " " |
24 | (I,J) | CH2Br2: Ocean dibromomethane emissions | [kg/m2/s] | BIOGSRCE | all fullchem | EmisCH2Br2_Biogenic | " " |
25 | (I,J) | Br2: Sea-salt Br2 emissions | [kg/m2/s] | BIOGSRCE | all fullchem | EmisBr2_Biogenic | " " |
26 | (I,J) | CH4: Methane | [molec/c2/s] | BIOGSRCE | all fullchem CH4 |
EmisCH4_Biogenic | " " |
ND47: 24h average concentrations
ND0 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L,N) | Daily (24-h) average tracer mixing ratio for Levels = L, LD47 | [v/v] | IJ-24H-$ | all simulations | SpeciesConc | Add this to a collection with frequency = 24 hours |
ND48: Station timeseries
ND0 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1-N | (I,J,L) | GEOS-Chem advected species number for GAMAP = 1, nAdvect | [v/v] | IJ-AVG-$ | all simulations | Not implemented in 12.0.0; may be superseded by ObsPack in 12.2.0 | |
501 | (I,J,L) | OH concentration (Tracer # for GAMAP = 1) | [molec/cm3] | TIME-SER | all simulations | " " | |
502 | (I,J,L) | NOy concentration (Tracer # for GAMAP = 2) | [v/v] | TIME-SER | all simulations | " " | |
503 | (I,J,L) | Relative humidity (Tracer # for GAMAP = 3) | [%] | TIME-SER | all simulations | " " | |
504 | (I,J,L) | 3-D Cloud fractions (Tracer # for GAMAP = 4) | [unitless] | TIME-SER | all simulations | " " | |
505 | (I,J) | Column optical depths (Tracer # for GAMAP = 5) | [unitless] | TIME-SER | all simulations | " " | |
506 | (I,J) | Cloud top heights (Tracer # for GAMAP = 6) | [hPa] | TIME-SER | all simulations | " " | |
507 | (I,J,L) | Air density (Tracer # for GAMAP = 7) | [molec/cm3] | TIME-SER | all simulations | " " | |
508 | (I,J,L) | Total sea salt tracer concentration (Tracer # for GAMAP = 8) | [unitless] | TIME-SER | all simulations | " " | |
509 | (I,J) | PBL heights (Tracer # for GAMAP = 1) | [m] | PBLDEPTH | all simulations | " " | |
510 | (I,J) | PBL heights (Tracer # for GAMAP = 2) | [levels] | PBLDEPTH | all simulations | " " | |
511 | (I,J,L) | Grid box height (Tracer # for GAMAP = 1) | [m] | BXHGHT-$ | all simulations | " " | |
512 | (I,J,L) | Pressure at level edges (Tracer # for GAMAP = 1) | [hPa] | PEDGE-$ | all simulations | " " | |
513 | (I,J) | Sea level pressure (Tracer # for GAMAP = 18) | [hPa] | DAO-FLDS | all simulations | " " | |
514 | (I,J,L) | Zonal wind (a.k.a. U-wind) (Tracer # for GAMAP = 1) | [m/s] | DAO-3D-$ | all simulations | " " | |
515 | (I,J,L) | Meridional wind (a.k.a. V-wind) (Tracer # for GAMAP = 2) | [m/s] | DAO-3D-$ | all simulations | " " | |
516 | (I,J,L) | Temperature (Tracer # for GAMAP = 3) | [K] | DAO-3D-$ | all simulations | " " | |
517 | (I,J,L) | Sulfate aerosol optical depth (Tracer # for GAMAP = 6) | [unitless] | OD-MAP-$ | all simulations | " " | |
518 | (I,J,L) | Black carbon aerosol optical depth (Tracer # for GAMAP = 9) | [unitless] | OD-MAP-$ | all simulations | " " | |
519 | (I,J,L) | Organic carbon aerosol optical depth (Tracer # for GAMAP = 12) | [unitless] | OD-MAP-$ | all simulations | " " | |
520 | (I,J,L) | Accumulation mode seasalt optical depth (Tracer # for GAMAP = 15) | [unitless] | OD-MAP-$ | all simulations | " " | |
521 | (I,J,L) | Coarse mode seasalt optical depth (Tracer # for GAMAP = 18) | [unitless] | OD-MAP_$ | all simulations | " " | |
522 | (I,J,L) | Total dust optical depth (Tracer # for GAMAP = 4) | [unitless] | OD-MAP-$ | all simulations | " " | |
523-529 | (I,J,L) | Size resolved dust optical depth (Tracer # for GAMAP = 21-27) | [unitless] | OD-MAP-$ | all simulations | " " |
ND49: Instantaneous timeseries
ND49 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1-N | (I,J,L) | GEOS-Chem advected species number for GAMAP = 1, nAdvect | [v/v] | IJ-AVG-$ | all simulations | SpeciesConc_?ADV? | Any field of the State_Chm, State_Diag, or State_Met objects can be archived to an instantaneous netCDF collection. |
501 | (I,J,L) | OH concentration (Tracer # for GAMAP = 1) | [molec/cm3] | TIME-SER | all simulations | SpeciesConc_OH | " " |
502 | (I,J,L) | NOy concentration (Tracer # for GAMAP = 2) | [v/v] | TIME-SER | all simulations | " " | |
503 | (I,J,L) | Relative humidity (Tracer # for GAMAP = 3) | [%] | TIME-SER | all simulations | Met_RH | " " |
504 | (I,J,L) | 3-D Cloud fractions (Tracer # for GAMAP = 4) | [unitless] | TIME-SER | all simulations | Met_CLDF | " " |
505 | (I,J) | Column optical depths (Tracer # for GAMAP = 5) | [unitless] | TIME-SER | all simulations | " " | |
506 | (I,J) | Cloud top heights (Tracer # for GAMAP = 6) | [hPa] | TIME-SER | all simulations | Met_CLDTOPS | " " |
507 | (I,J,L) | Air density (Tracer # for GAMAP = 7) | [molec/cm3] | TIME-SER | all simulations | Met_AIRDEN (dry) Met_MAIRDEN (moist) |
" " |
508 | (I,J,L) | Total sea salt tracer concentration (Tracer # for GAMAP = 8) | [unitless] | TIME-SER | all simulations | " " | |
509 | (I,J) | PBL heights (Tracer # for GAMAP = 1) | [m] | PBLDEPTH | all simulations | " " | |
510 | (I,J) | PBL heights (Tracer # for GAMAP = 2) | [levels] | PBLDEPTH | all simulations | " " | |
511 | (I,J,L) | Grid box height (Tracer # for GAMAP = 1) | [m] | BXHGHT-$ | all simulations | Met_BXHEIGHT | " " |
512 | (I,J,L) | Pressure at level edges (Tracer # for GAMAP = 1) | [hPa] | PEDGE-$ | all simulations | Met_PEDGE | " " |
513 | (I,J) | Sea level pressure (Tracer # for GAMAP = 18) | [hPa] | DAO-FLDS | all simulations | Met_SLP | " " |
514 | (I,J,L) | Zonal wind (a.k.a. U-wind) (Tracer # for GAMAP = 1) | [m/s] | DAO-3D-$ | all simulations | Met_U | " " |
515 | (I,J,L) | Meridional wind (a.k.a. V-wind) (Tracer # for GAMAP = 2) | [m/s] | DAO-3D-$ | all simulations | Met_V | " " |
516 | (I,J,L) | Temperature (Tracer # for GAMAP = 3) | [K] | DAO-3D-$ | all simulations | Met_T | " " |
517 | (I,J,L) | Sulfate aerosol optical depth (Tracer # for GAMAP = 6) | [unitless] | OD-MAP-$ | all simulations | " " | |
518 | (I,J,L) | Black carbon aerosol optical depth (Tracer # for GAMAP = 9) | [unitless] | OD-MAP-$ | all simulations | " " | |
519 | (I,J,L) | Organic carbon aerosol optical depth (Tracer # for GAMAP = 12) | [unitless] | OD-MAP-$ | all simulations | " " | |
520 | (I,J,L) | Accumulation mode seasalt optical depth (Tracer # for GAMAP = 15) | [unitless] | OD-MAP-$ | all simulations | " " | |
521 | (I,J,L) | Coarse mode seasalt optical depth (Tracer # for GAMAP = 18) | [unitless] | OD-MAP_$ | all simulations | " " | |
522 | (I,J,L) | Total dust optical depth (Tracer # for GAMAP = 4) | [unitless] | OD-MAP-$ | all simulations | " " | |
523-529 | (I,J,L) | Size resolved dust optical depth (Tracer # for GAMAP = 21-27) | [unitless] | OD-MAP-$ | all simulations | " " | |
530 | (I,J) | PARDF (diffuse PAR) (Tracer # for GAMAP = 20) | [W/m2] | DAO-FLDS | all simulations | Met_PARDF | " " |
531 | (I,J) | PARDR (direct PAR) (Tracer # for GAMAP = 21) | [W/m2] | DAO-FLDS | all simulations | Met_PARDR | " " |
532 | (I,J) | Daily LAI (leaf area index) (Tracer # for GAMAP = 9) | [cm2/cm2] | all simulations | TIME-SER | Met_XLAI | " " |
533 | (I,J) | Temperature at 2m (i.e. proxy for surface air temperature) (Tracer # for GAMAP = 5) | [K] | DAO-FLDS | all simulations | Met_T2M | " " |
534 | (I,J) | Accumulated precipitation (Tracer # for GAMAP = 3) | [mm/day] | DAO-FLDS | all simulations | Met_PRECTOT | " " |
ND50: 24h average timeseries
This diagnostic archives the the same diagnostic quantities as ND49 (listed above)
NOTE: Any field of the State_Chm, State_Diag, or State_Met objects can be sent to a netcdf time-averaged collection with a frequency of 24 hours.
ND51 and ND51b: Satellite timeseries
This diagnostic rchives the the same diagnostic quantities as ND49 (listed above)
NOTE: There is no netCDF-equivalent diagnostic in GEOS-Chem 12. Possibly in a subsequent version.
ND52: Gamma HO2
NOTE: This diagnostic is mostly obsolete. We now set this value in the Chemistry Menu of input.geos.
ND53: POPs diagnostics
ND0 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | Total POPs emissions | kg/m2/s | PG-SRCE | POPS | NOTE: Units changed from kg to kg/m2/s in GEOS-Chem 12.1.0 | |
2 | (I,J) | POP OC emissions | kg/m2/s | PG-SRCE | POPS | EmisPOPPPOCPO | " " |
3 | (I,J) | POP BC emissions | kg/m2/s | PG-SRCE | POPS | EmisPOPPBCPO | " " |
4 | (I,J) | Gas-phase POPs emissions | kg/m2/s | PG-SRCE | POPS | EmisPOPG | " " |
5 | (I,J) | Secondary emissions from soil | kg/m2/s | PG-SRCE | POPS | EmisPOPGfromSoil | " " |
6 | (I,J) | Secondary emissions from lakes | kg/m2/s | PG-SRCE | POPS | EmisPOPGfromLake | " " |
7 | (I,J) | Secondary emissions from leaves | kg/m2/s | PG-SRCE | POPS | EmisPOPGfromLeaf | " " |
8 | (I,J) | Secondary positive soil flux | ng/m2/day | PG-SRCE | POPS | FluxPOPGfromSoilToAir | |
9 | (I,J) | Secondary negative soil flux | ng/m2/day | PG-SRCE | POPS | FluxPOPGfromAirToSoil | |
10 | (I,J) | Secondary positive lake flux | ng/m2/day | PG-SRCE | POPS | FluxPOPGfromLakeToAir | |
11 | (I,J) | Secondary negative lake flux | ng/m2/day | PG-SRCE | POPS | FluxPOPGfromAirToLake | |
12 | (I,J) | Secondary positive leaf flux | ng/m2/day | PG-SRCE | POPS | FluxPOPGfromLeafToAir | |
13 | (I,J) | Secondary negative leaf flux | ng/m2/day | PG-SRCE | POPS | FluxPOPGfromAirToLeaf | |
14 | (I,J) | Fugacity ratios soil/air | 1 | PG-SRCE | POPS | FugacitySoilToAir | |
15 | (I,J) | Fugacity ratios lake/air | 1 | PG-SRCE | POPS | FugacityLakeToAir | |
16 | (I,J) | Fugacity ratios leaf/air | 1 | PG-SRCE | POPS | FugacityLeafToair | |
17 | (I,J,L) | Gross POP OC lost to gas | kg/s | PG-PP | POPS | LossPOPPOCPObyGasPhase | NOTE: Units changed from kg to kg/s in GEOS-Chem 12.1.0 |
18 | (I,J,L) | Gross POP OC formed from gas | kg/s | PG-PP | POPS | ProdPOPPOCPOfromGasPhase | " " |
19 | (I,J,L) | Gross POP BC lost to gas | kg/s | PG-PP | POPS | LossPOPPBCPObyGasPhase | " " |
20 | (I,J,L) | Gross POP BC formed from gas | kg/s | PG-PP | POPS | ProdPOPPBCPOfromGasPhase | " " |
21 | (I,J,L) | Production of oxidized POPG from reaction with OH | kg/s | PG-PP | POPS | ProdPOPGfromOH | " " |
22 | (I,J,L) | Production of oxidized POPOCPO from reaction with O3 | kg/s | PG-PP | POPS | ProdPOPPOCPOfromO3 | " " |
23 | (I,J,L) | Production of oxidized POPOCPI from reaction with O3 | kg/s | PG-PP | POPS | ProdPOPPOCPIfromO3 | " " |
24 | (I,J,L) | Production of oxidized POPBCPO from reaction with O3 | kg/s | PG-PP | POPS | ProdPOPPBCPOfromO3 | " " |
25 | (I,J,L) | Production of oxidized POPBCPI from reaction with O3 | kg/s | PG-PP | POPS | ProdPOPPBCPIfromO3 | " " |
26 | (I,J,L) | Production of oxidized POPOCPO from reaction with NO3 | kg/s | PG-PP | POPS | ProdPOPPOCPOfromNO3 | " " |
27 | (I,J,L) | Production of oxidized POPOCPI from reaction with NO3 | kg/s | PG-PP | POPS | ProdPOPPOCPIfromNO3 | " " |
28 | (I,J,L) | Production of oxidized POPBCPO from reaction with NO3 | [kg] | PG-PP | POPS | ProdPOPPBCPOfromNO3 | " " |
29 | (I,J,L) | Production of oxidized POPBCPI from reaction with NO3 | [kg] | PG-PP | POPS | ProdPOPPBCPIfromNO3 | " " |
--Bob Yantosca (talk) 21:49, 17 October 2018 (UTC)
ND54: Time in troposphere
ND54 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | Computes the amount of time that a given grid box spends in the troposphere | [1] | TIME-TPS | all simulations |
ND55: Tropopause diagnostics
ND55 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | Level at which the dynamic tropopause occurs | [unitless] | TR-PAUSE | all simulations | Met_TROPLEV | |
2 | (I,J) | Height of the dynamic tropopause | [km] | TR-PAUSE | all simulations | Met_TROPHT | |
3 | (I,J) | Pressure of the dynamic tropopause | [mb] | TR-PAUSE | all simulations | Met_TROPP |
ND56: Lightning diagnostics
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND56 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | Total lightning flash rate | [flashes/min/km2] | LFLASH-$ | all fullchem | ||
2 | (I,J) | Intra-cloud flash rate | [flashes/min/km2] | LFLASH-$ | all fullchem | ||
3 | (I,J) | Cloud-ground flash rate | [flashes/min/km2] | LFLASH-$ | all fullchem | ||
4 | (I,J) | Lightning cloud top height | [level] | LFLASH-$ | all fullchem |
ND57: Potential temperature
ND57 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | Potential temperature | [K] | THETA-$ | all simulations | Met_THETA |
ND58: CH4 emissions
NOTE: In GEOS-Chem 12.0.0 and higher, these diagnostics are archived by HEMCO. The ND58 diagnostic was deactivated in GEOS-Chem 12.1.0.
ND58 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | CH4-TOT: Total emissions | kg | CH4-EMIS | CH4 | EmisCH4_Total | Now archived in the HEMCO_diagnostics*.nc files, as kg/m2/s |
2 | (I,J) | CH4-GAO: Gas & Oil emissions | kg | CH4-EMIS | CH4 | EmisCH4_Oil | " " |
3 | (I,J) | CH4-COL: Coal emisisons | kg | CH4-EMIS | CH4 | EmisCH4_Gas | " " |
4 | (I,J) | CH4-LIV: Livestock emissions | kg | CH4-EMIS | CH4 | EmisCH4_Livestock | " " |
5 | (I,J) | CH4-WST: Waste emisisons | kg | CH4-EMIS | CH4 | EmisCH4_Wastewater | " " |
6 | (I,J) | CH4-BFL: Biofuel emissions | kg | CH4-EMIS | CH4 | EmisCH4_Biofuel | " " |
7 | (I,J) | CH4-RIC: Rice field emissions | kg | CH4-EMIS | CH4 | EmisCH4_Rice | " " |
8 | (I,J) | CH4-OTA: Other anthropogenic emissions | kg | CH4-EMIS | CH4 | EmisCH4_OtherAnth | " " |
9 | (I,J) | CH4-BBN: Biomass burning emissions | kg | CH4-EMIS | CH4 | EmisCH4_BiomassBurn | " " |
10 | (I,J) | CH4-WTL: Wetland emissions | kg | CH4-EMIS | CH4 | EmisCH4_Wetlands | " " |
11 | (I,J) | CH4-SAB: Soil absorption | kg | CH4-EMIS | CH4 | EmisCH4_Seeps | " " |
12 | (I,J) | CH4-OTN: Other natural emissions | kg | CH4-EMIS | CH4 | EmisCH4_SoilAbsorb | " " |
ND59: TOMAS size-resolved aerosol emissions
ND59 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | Size-resolved primary aerosol number emission | [No.] | NK-EMISS | TOMAS | ||
2 | (I,J,L) | Size-resolved primary aerosol sulfate mass emission | [kg S] | SF-EMIS | TOMAS | ||
3 | (I,J,L) | Size-resolved primary aerosol sea-salt emission | [kg] | SS-EMIS | TOMAS | ||
4 | (I,J,L) | Size-resolved primary Hydrophillic EC mass emission | [kg] | ECIL-SRC | TOMAS | ||
5 | (I,J,L) | Size-resolved primary Hydrophobic EC mass emission | [kg] | ECOB-SRC | TOMAS | ||
6 | (I,J,L) | Size-resolved primary Hydrophillic OC mass emission | [kg] | OCIL-SRC | TOMAS | ||
7 | (I,J,L) | Size-resolved primary Hydropobic OC mass emission | [kg] | OCOB-SRC | TOMAS | ||
8 | (I,J,L) | Size-resolved dust mass emission | [kg] | DUST-SRC | TOMAS |
ND60
TOMAS simulations: Aerosol microphysics rate
ND0 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | Condensation rate | [no.] or [kg] | TMS-COND | TOMAS | ||
2 | (I,J,L) | Coagulation rate | [no.] or [kg] | TMS-COAG | TOMAS | ||
3 | (I,J,L) | Nucleation rate | [no.] or [kg] | TMS-NUCL | TOMAS | ||
4 | (I,J,L) | Aqueous oxidation rate | [no.] or [kg] | TMS-AQOX | TOMAS | ||
5 | (I,J,L) | Accumulated error fixed | [no.] or [kg] | AERO-FIX | TOMAS | ||
6 | (I,J,L) | SOA condensation rate | [no.] or [kg] | TMS-SOA | TOMAS |
Non-TOMAS simulations: Wetland fraction
NOTE: In GEOS-Chem 12, the CH4 simulation now reads wetland emissions from disk. Therefore wetland emissions are now archived via the HEMCO diagnostics facility, making the ND60 diagnostic obsolete.
ND59 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | Wetland fraction | unitless | WET-FRAC | CH4 | EmisCH4_Wetlands | Archived to HEMCO diagnostics as kg/m2/s |
ND61: TOMAS 3-D rate
ND61 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | Particle Dp >10 nm formation rate | [cm-3s-1] | TOMAS-3D | TOMAS | ||
2 | (I,J,L) | Nucleation rate (cluster size) | [cm-3s-1] | TOMAS-3D | TOMAS |
ND62: Instantaneous columns
ND62 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,N) | I-J instantaneous integrated column density for tracers | [molec/cm2] or [atoms C/cm2] |
INST-MAP | all simulations | none | Removed in 12.0.0 |
ND63: Ship emission diagnostics
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND63 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | Fraction of NOx remaining | unitless | SHIP-$$$ | all fullchem | ||
2 | (I,J) | Integrated Ozone Production Efficiency (OPE) | unitless | SHIP-$$$ | all fullchem | ||
3 | (I,J) | Ship plume NOx remaining | [molec/cm2/s] | SHIP-$$$ | all fullchem | ||
4 | (I,J) | Ship plume Ox production | [molec/cm2/s] | SHIP-$$$ | all fullchem | ||
5 | (I,J) | Ship NOx emissions | [molec/cm2/s] | SHIP-$$$ | all fullchem |
ND64: Radiative flux
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND64 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | Net UV flux in bin | [W/m2] | FJX-FLUX | all fullchem | NOTE: Might be broken | |
2 | (I,J,L) | Direct UV flux in bin | [W/m2] | FJX-FLUX | all fullchem | NOTE: Might be broken | |
3 | (I,J,L) | Diffuse UV flux in bin | [W/m2] | FJX-FLUX | all fullchem | NOTE: Might be broken |
ND65: Chemical production and loss diagnostics
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND65 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L,N) | Chemical family P/L rates. See the FlexChem wiki page for more information. | [molec/cm3/s] | PORL-L=$ | all fullchem tagCO tagO3 |
Prod_?PRD? Loss_?LOS? |
ND66: GMAO 3-D met fields
NOTE: Any field of the State_Met object can be saved out to netCDF diagnostic output files under the diagnostic name: Met_<fieldname>.
ND66 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | UWND : U-winds | [m/s] | DAO-3D-$ | all simulations | Met_U | |
2 | (I,J,L) | VWND : V-winds | [m/s] | DAO-3D-$ | all simulations | Met_V | |
3 | (I,J,L) | TMPU : Temperature | [K] | DAO-3D-$ | all simulations | Met_T | |
4 | (I,J,L) | SPHU : Specific humidity | [g H20/kg air] | DAO-3D-$ | all simulations | Met_SPHU | |
5 | (I,J,L) | CMFMC: Convective Mass Flux | [kg/m2/s] | DAO-3D-$ | all simulations | Met_CMFMC | NOTE: Met_CMFMC must be placed into a netCDF collection defined on level edges |
6 | (I,J,L) | DTRAIN : Detrainment Flux | [kg/m2/s] | DAO-3D-$ | all simulations | Met_DTRAIN |
ND67: GMAO 2-D met fields
NOTE: Any field of the State_Met object can be saved out to netCDF diagnostic output files under the diagnostic name: Met_<fieldname>.
ND67 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | HFLUX: sensible heat flux from surface | [W/m2] | DAO-FLDS | all simulations | Met_HFLUX | |
2 | (I,J) | RADSWG: solar radiation at the ground | [W/m2] | DAO-FLDS | all simulations | Met_RADSWG | |
3 | (I,J) | PRECTOT: total precipitation at the ground | [mm/day] | DAO-FLDS | all simulations | Met_PRECTOT | |
4 | (I,J) | PRECCON: total convective precipitation at the ground | [mm/day] | DAO-FLDS | all simulations | Met_PRECCON | |
5 | (I,J) | TS: surface air temperature For GEOS-4, GEOS-5, and MERRA, this is reall simulationsy the air temperature at 2 m altitude above the surface. |
[K] | DAO-FLDS | all simulations | Met_TS | |
6 | (I,J) | RADSWT: solar radiation at the top of the atmosphere | [W/m2] | DAO-FLDS | all simulations | Met_RADSWT | |
7 | (I,J) | USTAR: friction velocity | [m/s] | DAO-FLDS | all simulations | Met_USTAR | |
8 | (I,J) | Z0: surface roughness height | [m] | DAO-FLDS | all simulations | Met_Z0 | |
9 | (I,J) | PBL (aka PBLM): planetary boundary layer depth | [m] | DAO-FLDS | all simulations | Met_PBL | |
10 | (I,J) | CLDFRC: column cloud fraction | [0 - 1] | DAO-FLDS | all simulations | Met_CLDFRC | |
11 | (I,J) | U10M: U-winds at 10 meters altitude | [m/s] | DAO-FLDS | all simulations | Met_U10M | |
12 | (I,J) | V10M: V-winds at 10 meters altitude | [m/s] | DAO-FLDS | all simulations | Met_V10M | |
13 | (I,J) | PS-PBL: Boundary Layer Top Pressure | [hPa] | DAO-FLDS | all simulations | None | |
14 | (I,J) | ALBD: Surface Albedo | [unitless] | DAO-FLDS | all simulations | Met_ALBD | |
15 | (I,J) | PHIS: Geopotential Heights | [m] | DAO-FLDS | all simulations | Met_PHIS | |
16 | (I,J) | CLTOP : Cloud Top Height | [levels] | DAO-FLDS | all simulations | Met_CLDTOPS | |
17 | (I,J) | TROPP: Tropopause pressure | [hPa] | DAO-FLDS | all simulations | Met_TROPP | |
18 | (I,J) | SLP: Sea Level pressure (read directly from the met fields) | [hPa] | DAO-FLDS | all simulations | Met_SLP | |
19 | (I,J) | TSKIN : Ground / Sea Surface Temp | [K] | DAO-FLDS | all simulations | Met_TSKIN | |
20 | (I,J) | PARDF : Photosyntheticall simulationsy active diffuse radiation | [W/m2] | DAO-FLDS | all simulations | Met_PARDF | |
21 | (I,J) | PARDR : Photosyntheticall simulationsy active direct radiation | [W/m2] | DAO-FLDS | all simulations | Met_PARDR | |
22 | (I,J) | GWETTOP: Top soil wetness | [unitless] | DAO-FLDS | all simulations | Met_GWETTOP | |
23 | (I,J) | EFLUX: Latent heat flux | [W/m2] | DAO-FLDS | all simulations | Met_EFLUX |
NOTE: Any field of the State_Met object can be saved out to netCDF diagnostic output files under the diagnostic name: Met_<fieldname>.
ND68 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,L) | BXHEIGHT: Grid box heights | [m] | BXHGHT-$ | all simulations | Met_BXHEIGHT | |
2 | (I,J,L) | AD: Air mass in grid box | [kg] | BXHGHT-$ | all simulations | Met_AD | |
3 | (I,J,L) | AVGW : Mixing ratio of water vapor | [v/v] | BXHGHT-$ | all simulations | Met_AVGW | |
4 | (I,J,L) | AIRNUMDEN: Air number density | [molec air/cm3] | BXHGHT-$ | all simulations | Met_AIRNUMDEN | |
5 | (I,J,L) | T: Temperature | [K] | BXHGHT-$ | all simulations | Met_T | |
6 | (I,J,L) | PMID: Pressure at average pressure level | [hPa] | BXHGHT-$ | all simulations | Met_PMID | |
7 | (I,J,L) | PEDGE: Presure at grid box lower edge | [hPa] | BXHGHT-$ | all simulations | Met_PEDGE | |
8 | (I,J,L) | RH: Relative humidity | [%] | BXHGHT-$ | all simulations | Met_RH |
ND69: Surface areas
ND69 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J) | DXYP: grid box surface areas | [m2] | DXYP | all simulations | AREA | Surface area in m2 is written to each netCDF diagnostic file created by HEMCO or History; no need to request it explicitly |
ND70: Print debug output
This diagnostic does not print to bpch or netCDF, but toggles debug printout to the GEOS-Chem log file.
ND71: Hourly maximum mixing ratio
ND71 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,N) | Hourly maximum tracer mixing ratio at the surface | [v/v] | IJ-MAX-$ | all simulations | None | Not included in GEOS-Chem 12 |
ND72: RRTMG diagnostics
ND72 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,N) | All-sky TOA short-wave radiation | W/m2 | RADMAP-$ | RRTMG | RadAllSkySWTOA | Still TBA |
2 | (I,J,N) | All-sky surface short-wave radiation | W/m2 | RADMAP-$ | RRTMG | RadAllSkySWSurf | Still TBA |
3 | (I,J,N) | All-sky TOA long-wave radiation | W/m2 | RADMAP-$ | RRTMG | RadAllSkyLWTOA | Still TBA |
4 | (I,J,N) | All-sky surface long-wave radiation | W/m2 | RADMAP-$ | RRTMG | RadAllSkyLWSurf | Still TBA |
5 | (I,J,N) | Clear-sky TOA short-wave radiation | W/m2 | RADMAP-$ | RRTMG | RadClrSkySWTOA | Still TBA |
6 | (I,J,N) | Clear-sky surface short-wave radiation | W/m2 | RADMAP-$ | RRTMG | RadClrSkySWSurf | Still TBA |
7 | (I,J,N) | Clear-sky TOA long-wave radiation | W/m2 | RADMAP-$ | RRTMG | RadClrSkyLWTOA | Still TBA |
8 | (I,J,N) | Clear-sky surface long-wave radiation | W/m2 | RADMAP-$ | RRTMG | RadClrSkyLWSurf | Still TBA |
ND73: ISORROPIA diagnostics
NOTE: All fullchem refers to all simulations that use a full-chemistry mechanism (i.e. benchmark, complexSOA*, standard, tropchem. aciduptake, marinePOA, RRTMG, TOMAS).
ND73 # | Dims | Description | Units | Category | Simulations | netCDF equivalent | Notes |
---|---|---|---|---|---|---|---|
1 | (I,J,N) | ISORROPIA aerosol pH | 1 | ISRPIA-$ | all fullchem aerosol |
Chem_PHSAV | Stored in State_Chm%PHSAV |
2 | (I,J,N) | ISORROPIA H+ concentration | [M] | ISRPIA-$ | all fullchem aerosol |
Chem_HPLUSAV | Stored in State_Chm%HPLUSSAV |
3 | (I,J,N) | ISORROPIA aerosol water | [μg/m3] | ISRPIA-$ | all fullchem aerosol |
Chem_WATERSAV | Stored in State_Chm%WATERSAV |