GEOS-CHEM SIMULATION v9-01-01: GEOS-5 NOx-Ox-HC-Aerosol simulation (43 tracers) ------------------------+------------------------------------------------------ %%% SIMULATION MENU %%% : Start YYYYMMDD, HHMMSS : 20050101 000000 End YYYYMMDD, HHMMSS : 20060101 000000 Run directory : ./ Input restart file : ./restart.2x25.geos5.YYYYMMDDhh Make new restart file? : T Output restart file(s) : ./restart.2x25.geos5.YYYYMMDDhh Root data directory : /as/group/geos/data/GEOS_2x2.5/ => GCAP subdir : AGRID/YYYY/MM/ => GEOS-3 subdir : GEOS_3/YYYY/MM/ => GEOS-4 subdir : GEOS_4_v4/YYYY/MM/ => GEOS-5 subdir : GEOS_5/YYYY/MM/ => MERRA subdirectory : MERRA/YYYY/MM/ Dir w/ 1x1 emissions etc: /as/group/geos/data/GEOS_1x1/ Temporary directory : ./ Unzip met fields? : F Wait for met fields? : F Use variable tropopause?: T Use LINOZ strat chem? : T Global offsets I0, J0 : 0 0 ------------------------+------------------------------------------------------ %%% TRACER MENU %%% : Type of simulation : 3 Number of Tracers : 43 Tracer Entries -------> : TR# Name g/mole Tracer Members; () = emitted Tracer #1 : 1 NOx 46.0 NO2 (NO) NO3 HNO2 Tracer #2 : 2 Ox 48.0 (O3) NO2 2NO3 Tracer #3 : 3 PAN 121.0 Tracer #4 : 4 CO 28.0 (CO) Tracer #5 : 5 ALK4 12.0 (4C) Tracer #6 : 6 ISOP 12.0 (5C) Tracer #7 : 7 HNO3 63.0 (HNO3) Tracer #8 : 8 H2O2 34.0 Tracer #9 : 9 ACET 12.0 (3C) Tracer #10 : 10 MEK 12.0 (4C) Tracer #11 : 11 ALD2 12.0 (2C) Tracer #12 : 12 RCHO 58.0 Tracer #13 : 13 MVK 70.0 Tracer #14 : 14 MACR 70.0 Tracer #15 : 15 PMN 147.0 Tracer #16 : 16 PPN 135.0 Tracer #17 : 17 R4N2 119.0 Tracer #18 : 18 PRPE 12.0 (3C) Tracer #19 : 19 C3H8 12.0 (3C) Tracer #20 : 20 CH2O 30.0 (CH2O) Tracer #21 : 21 C2H6 12.0 (2C) Tracer #22 : 22 N2O5 105.0 Tracer #23 : 23 HNO4 79.0 Tracer #24 : 24 MP 48.0 Tracer #25 : 25 DMS 62.0 Tracer #26 : 26 SO2 64.0 Tracer #27 : 27 SO4 96.0 Tracer #28 : 28 SO4s 96.0 Tracer #29 : 29 MSA 96.0 Tracer #30 : 30 NH3 17.0 Tracer #31 : 31 NH4 18.0 Tracer #32 : 32 NIT 62.0 Tracer #33 : 33 NITs 62.0 Tracer #34 : 34 BCPI 12.0 Tracer #35 : 35 OCPI 12.0 Tracer #36 : 36 BCPO 12.0 Tracer #37 : 37 OCPO 12.0 Tracer #38 : 38 DST1 29.0 Tracer #39 : 39 DST2 29.0 Tracer #40 : 40 DST3 29.0 Tracer #41 : 41 DST4 29.0 Tracer #42 : 42 SALA 36.0 Tracer #43 : 43 SALC 36.0 ------------------------+------------------------------------------------------ %%% TRANSPORT MENU %%% : Turn on Transport : T => Use Flux Correction?: F => Fill Negative Values: T => IORD, JORD, KORD : 3 3 7 Transport Timestep [min]: 15 Use strat O3/NOy BC's : T ------------------------+------------------------------------------------------ %%% CONVECTION MENU %%% : Turn on Cloud Conv? : T Turn on PBL Mixing? : T => Use non-local PBL? : T Convect Timestep (min) : 15 ------------------------+------------------------------------------------------ %%% EMISSIONS MENU %%% : Turn on emissions? : T Emiss timestep (min) : 30 Include anthro emiss? : T => Scale to (1985-2005): -1 => Use EMEP emissions? : F => Use BRAVO emissions?: F => Use EDGAR emissions?: T => Use EDGAR4 emissions: T => Use STREETS emiss? : F => Use CAC emissions? : F => Use NEI2005 emiss? : F Use EPA/NEI99 (anth+bf)?: F w/ ICARTT modif.? : F w/ VISTAS NOx emis? : F Include biofuel emiss? : T Include biogenic emiss? : T => Use MEGAN inventory?: T => Use PCEEA model? : F => Use MEGAN for MONO? : T => Isoprene scaling : 1 Include biomass emiss? : T => Seasonal biomass? : F => Scaled to TOMSAI? : F => Use GFED2 biomass? :--- => monthly GFED2? : F => 8-day GFED2? : T => 3-hr GFED2? : F => synoptic GFED2? : F Individual NOx sources :--- => Use aircraft NOx? : T => Use lightning NOx? : T => Spat-seas constr?: T => Use soil NOx : T => Use fertilizer NOx : T NOx scaling : 1 Use ship SO2 emissions? :--- => global EDGAR ? : T => global ICOADS ? : F => EMEP over EUROPE ? : F => ship SO2 Corbett ? : F => ship SO2 Arctas ? : T Use COOKE BC/OC (N. Am.): F Use AVHRR-derived LAI? : F Use MODIS-derived LAI? : T ------------------------+------------------------------------------------------ %%% AEROSOL MENU %%% : Online SULFATE AEROSOLS : T Online CRYST/AQ AEROSOLS: F Online CARBON AEROSOLS : T Online 2dy ORG AEROSOLS : F Online DUST AEROSOLS : T => Use DEAD emissions? : T Online SEASALT AEROSOLS : T -- SALA radius bin [um]: 0.1 0.5 -- SALC radius bin [um]: 0.5 4.0 Online dicarb. chem. : F ------------------------+------------------------------------------------------ %%% DEPOSITION MENU %%% : Turn on Dry Deposition? : T Turn on Wet Deposition? : T ------------------------+------------------------------------------------------ %%% CHEMISTRY MENU %%% : Turn on Chemistry? : T Chemistry Timestep [min]: 30 Read and save CSPEC_FULL: T USE solver coded by KPP : F ------------------------+------------------------------------------------------ %%% OUTPUT MENU %%% : 123456789.123456789.123456789.1--1=ZERO+2=BPCH Schedule output for JAN : 3000000000000000000000000000000 Schedule output for FEB : 30000000000000000000000000000 Schedule output for MAR : 3000000000000000000000000000000 Schedule output for APR : 300000000000000000000000000000 Schedule output for MAY : 3000000000000000000000000000000 Schedule output for JUN : 300000000000000000000000000000 Schedule output for JUL : 3000000000000000000000000000000 Schedule output for AUG : 3000000000000000000000000000000 Schedule output for SEP : 300000000000000000000000000000 Schedule output for OCT : 3000000000000000000000000000000 Schedule output for NOV : 300000000000000000000000000000 Schedule output for DEC : 3000000000000000000000000000000 ------------------------+------------------------------------------------------ %%% GAMAP MENU %%% : diaginfo.dat path : diaginfo.dat tracerinfo.dat path : tracerinfo.dat ------------------------+------------------------------------------------------ %%% DIAGNOSTIC MENU %%% : Binary punch file name : ctm.YYYYMMDD.bpch Diagnostic Entries ---> : L Tracers to print out for each diagnostic ND01: Rn/Pb/Be source : 0 all ND02: Rn/Pb/Be decay : 0 all ND03: Hg emissions, P/L : 0 all ND04: CO2 Sources : 0 all ND05: Sulfate prod/loss : 0 all ND06: Dust aer source : 1 all ND07: Carbon aer source : 47 all ND08: Seasalt aer source: 1 all ND09: - : 0 all ND10: - : 0 all ND11: Acetone sources : 1 all ND12: BL fraction : 0 all ND13: Sulfur sources : 47 all ND14: Cld conv mass flx : 0 all ND15: BL mix mass flx : 0 all ND16: LS/Conv prec frac : 0 all ND17: Rainout fraction : 0 all ND18: Washout fraction : 0 all ND19: CH4 loss : 0 all ND21: Optical depths : 47 all ND22: J-Values : 47 1 7 8 20 99 => JV time range : 11 13 ND24: E/W transpt flx : 0 all ND25: N/S transpt flx : 0 all ND26: U/D transpt flx : 0 all ND27: Strat NOx,Ox,HNO3 : 0 1 2 7 ND28: Biomass emissions : 1 1 4 5 9 10 11 18 19 20 21 26 30 34 35 ND29: CO sources : 1 all ND30: Land Map : 0 all ND31: Surface pressure : 48 all ND32: NOx sources : 1 all ND33: Column tracer : 0 all ND34: Biofuel emissions : 1 1 4 5 9 10 11 18 19 20 21 ND35: Tracers at 500 mb : 0 all ND36: Anthro emissions : 1 1 4 5 9 10 18 19 21 ND37: Updraft scav frac : 0 all ND38: Cld Conv scav loss: 47 all ND39: Wetdep scav loss : 47 all ND41: Afternoon PBL ht : 0 all ND42: SOA concentrations: 0 all ND43: Chem OH,NO,HO2,NO2: 47 all ==> OH/HO2 time range : 0 24 ==> NO/NO2 time range : 10 14 ND44: Drydep flx/vel : 1 all ND45: Tracer Conc's : 47 all ==> ND45 Time range : 0 24 ND46: Biogenic emissions: 1 all ND47: 24-h avg trc conc : 0 all ND52: GAMMA HO2 : 0 all ND53: - : 0 all ND54: Time in t'sphere : 47 all ND55: Tropopause height : 47 all ND56: Lightning flashes : 0 all ND57: Potential T : 0 all ND58: CH4 Emissions : 0 all ND59: - : 0 all ND60: Wetland Frac : 0 all ND61: - : 0 all ND62: Inst column maps : 0 all ND63: - : 0 all ND64: - : 0 all ND66: DAO 3-D fields : 47 all ND67: DAO 2-D fields : 47 all ND68: Airmass/Boxheight : 47 all ND69: Surface area : 0 all ND70: Debug output : 0 all ------------------------+------------------------------------------------------ %%% PLANEFLIGHT MENU %%%: Turn on plane flt diag? : F Flight track info file : Planeflight.dat.YYYYMMDD Output file name : plane.log.YYYYMMDD ------------------------+------------------------------------------------------ %%% ND48 MENU %%% : Turn on ND48 stations : F Station Timeseries file : stations.YYYYMMDD Frequency [min] : 60 Number of stations : 0 ------------------------+------------------------------------------------------ %%% ND49 MENU %%% : Turn on ND49 diagnostic : F Inst 3-D timeser. file : tsYYYYMMDD.bpch Tracers to include : 94 Frequency [min] : 120 IMIN, IMAX of region : 70 30 JMIN, JMAX of region : 23 46 LMIN, LMAX of region : 1 1 ------------------------------------------------------------------------------- %%% ND50 MENU %%% : Turn on ND50 diagnostic : T 24-hr avg timeser. file : ts_24h_avg.YYYYMMDD.bpch Output as HDF : F Tracers to include : 1 4 20 25 26 27 28 29 30 31 32 33 34 35 36 37 77 82 83 84 85 86 87 93 94 98 99 IMIN, IMAX of region : 1 144 JMIN, JMAX of region : 1 91 LMIN, LMAX of region : 1 47 ------------------------------------------------------------------------------- %%% ND51 MENU %%% : Turn on ND51 diagnostic : T LT avg timeseries file : ts_10_12.NA.YYYYMMDD.bpch Output as HDF : F Tracers to include : 1 4 20 25 26 27 28 29 30 31 32 33 34 35 36 37 77 82 83 84 85 86 87 93 94 98 99 GMT Hour for disk write : 0 Avg Period [LT hours] : 10 12 IMIN, IMAX of region : 1 144 JMIN, JMAX of region : 1 91 LMIN, LMAX of region : 1 47 ------------------------------------------------------------------------------- %%% ND51b MENU %%% : Turn on ND51b diagnstic : T LT avg timeseries file : ts_13_15.NA.YYYYMMDD.bpch Output as HDF5? : F Tracers to include : 1 4 20 25 26 27 28 29 30 31 32 33 34 35 36 37 77 82 83 84 85 86 87 93 94 98 99 GMT Hour for disk write : 0 Avg Period [LT hours] : 13 15 IMIN, IMAX of region : 1 144 JMIN, JMAX of region : 1 91 LMIN, LMAX of region : 1 47 ------------------------+------------------------------------------------------ %%% PROD & LOSS MENU %%%: Turn on P/L (ND65) diag?: F # of levels for ND65 : 47 Save O3 P/L (ND20)? : F Number of P/L families : 4 1st chemical family : POX: O3 NO2 2NO3 PAN PMN PPN HNO4 3N2O5 HNO3 2nd chemical family : LOX: O3 NO2 2NO3 PAN PMN PPN HNO4 3N2O5 HNO3 3rd chemical family : PCO: CO 4th chemical family : LCO: CO ------------------------+------------------------------------------------------ %%% ARCHIVED OH MENU %%%: Dir w/ archived OH files: /as/data/geos/GEOS_MEAN/OHmerge/v5-07-08/ ------------------------+------------------------------------------------------ %%% O3 P/L MENU %%% : Dir w/ O3 P/L rate files: /as/data/geos/GEOS_MEAN/O3_PROD_LOSS/2003.v6-01-05/ ------------------------+------------------------------------------------------ %%% BENCHMARK MENU %%% : Save benchmark output? : T File w/ initial Ox : Ox.mass.initial File w/ final Ox : Ox.mass.final ------------------------+------------------------------------------------------ %%% NESTED GRID MENU %%%: Save TPCORE BC's : F Input BCs at 2x2.5? : T Over North America? : F TPCORE NA BC directory : BC_2x25_NA/ Over Europe? : F TPCORE EU BC directory : BC_2x25_EU/ Over China? : F TPCORE CH BC directory : BC_2x25_CH/ Over Custom Region? : F TPCORE BC directory : BC_2x25/ BC timestep [min] : 180 LL box of BC region : 9 26 UR box of BC region : 29 41 1x1 offsets I0_W, J0_W : 3 3 ------------------------+------------------------------------------------------ %%% UNIX CMDS MENU %%% : Background symbol : & Redirect symbol : > Unix remove command : rm -f Unix pathname separator : / Unix wildcard character : * Unix unzip command : gzip -dc Zip file suffix : .gz ------------------------+------------------------------------------------------ END OF FILE : ------------------------+------------------------------------------------------